RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C UBC11P52492 156 aa3.72□□□□□ -1.81
CIT1YNR001C VPS73P53142 486 aaKnown RBP3.72□□□□□ -1.81
CIT1YNR001C YNL143CP53908 130 aa3.72□□□□□ -1.81
CIT1YNR001C MCP2Q06567 569 aa3.72□□□□□ -1.81
CIT1YNR001C YLR413WQ06689 675 aa3.72□□□□□ -1.81
CIT1YNR001C SIL1Q08199 421 aa3.72□□□□□ -1.81
CIT1YNR001C ABP140Q08641 628 aaKnown RBP3.72□□□□□ -1.81
CIT1YNR001C INP53Q12271 1107 aa3.72□□□□□ -1.81
CIT1YNR001C ARG81P05085 880 aa3.71□□□□□ -1.82
CIT1YNR001C RPS24AP0CX31 135 aaKnown RBP3.71□□□□□ -1.82
CIT1YNR001C RPS24BP0CX32 135 aaKnown RBP3.71□□□□□ -1.82
CIT1YNR001C CLN1P20437 546 aa3.71□□□□□ -1.82
CIT1YNR001C KGD1P20967 1014 aaKnown RBP3.71□□□□□ -1.82
CIT1YNR001C UBA1P22515 1024 aaKnown RBP3.71□□□□□ -1.82
CIT1YNR001C RAD14P28519 371 aa3.71□□□□□ -1.82
CIT1YNR001C FAA1P30624 700 aaKnown RBP3.71□□□□□ -1.82
CIT1YNR001C MCM4P30665 933 aaKnown RBP3.71□□□□□ -1.82
CIT1YNR001C NTG1P31378 399 aa3.71□□□□□ -1.82
CIT1YNR001C NDI1P32340 513 aa3.71□□□□□ -1.82
CIT1YNR001C VPH2P32341 215 aa3.71□□□□□ -1.82
CIT1YNR001C RAD24P32641 659 aa3.71□□□□□ -1.82
CIT1YNR001C PEX2P32800 271 aa3.71□□□□□ -1.82
CIT1YNR001C YBL055CP34220 418 aaPredicted RBP3.71□□□□□ -1.82
CIT1YNR001C PHO11P35842 467 aa3.71□□□□□ -1.82
CIT1YNR001C NUP133P36161 1157 aa3.71□□□□□ -1.82
CIT1YNR001C FLO10P36170 1169 aa3.71□□□□□ -1.82
CIT1YNR001C PIM1P36775 1133 aa3.71□□□□□ -1.82
CIT1YNR001C PHO12P38693 467 aa3.71□□□□□ -1.82
CIT1YNR001C FAD1P38913 306 aa3.71□□□□□ -1.82
CIT1YNR001C SER3P40054 469 aa3.71□□□□□ -1.82
CIT1YNR001C BRO1P48582 844 aa3.71□□□□□ -1.82
CIT1YNR001C VMA10P48836 114 aaKnown RBP3.71□□□□□ -1.82
CIT1YNR001C COP1P53622 1201 aaKnown RBP3.71□□□□□ -1.82
CIT1YNR001C BUD17P53727 317 aa3.71□□□□□ -1.82
CIT1YNR001C ABZ2Q03266 374 aa3.71□□□□□ -1.82
CIT1YNR001C INP2Q03824 705 aa3.71□□□□□ -1.82
CIT1YNR001C RPC11Q04307 110 aaPredicted RBP3.71□□□□□ -1.82
CIT1YNR001C UFO1Q04511 668 aa3.71□□□□□ -1.82
CIT1YNR001C RGC1Q06108 1083 aaKnown RBP3.71□□□□□ -1.82
CIT1YNR001C YDL242WQ07746 117 aa3.71□□□□□ -1.82
CIT1YNR001C RAD61Q99359 647 aa3.71□□□□□ -1.82
CIT1YNR001C STE2D6VTK4 431 aa3.7□□□□□ -1.82
CIT1YNR001C PMR1P13586 950 aa3.7□□□□□ -1.82
CIT1YNR001C PUP3P25451 205 aaKnown RBP3.7□□□□□ -1.82
CIT1YNR001C BMH1P29311 267 aaKnown RBP3.7□□□□□ -1.82
CIT1YNR001C DPH5P32469 300 aaPredicted RBP3.7□□□□□ -1.82
CIT1YNR001C ZTA1P38230 334 aaKnown RBP3.7□□□□□ -1.82
CIT1YNR001C PIH1P38768 344 aa3.7□□□□□ -1.82
CIT1YNR001C CTM1P38818 585 aa3.7□□□□□ -1.82
CIT1YNR001C HRB1P38922 454 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
CIT1YNR001C ELO1P39540 310 aa3.7□□□□□ -1.82
CIT1YNR001C ECM10P39987 644 aa3.7□□□□□ -1.82
CIT1YNR001C FMP52P40008 231 aa3.7□□□□□ -1.82
CIT1YNR001C GVP36P40531 326 aaKnown RBP3.7□□□□□ -1.82
CIT1YNR001C IAH1P41734 238 aa3.7□□□□□ -1.82
CIT1YNR001C GCD10P41814 478 aa3.7□□□□□ -1.82
CIT1YNR001C YFR018CP43599 363 aa3.7□□□□□ -1.82
CIT1YNR001C RPC17P47076 161 aa3.7□□□□□ -1.82
CIT1YNR001C YJR079WP47126 109 aa3.7□□□□□ -1.82
CIT1YNR001C YIP4P53093 235 aa3.7□□□□□ -1.82
CIT1YNR001C COG2P53271 262 aa3.7□□□□□ -1.82
CIT1YNR001C YGR151CP53287 111 aa3.7□□□□□ -1.82
CIT1YNR001C LSC1P53598 329 aaKnown RBP3.7□□□□□ -1.82
CIT1YNR001C UBX2Q04228 584 aa3.7□□□□□ -1.82
CIT1YNR001C YML053CQ04978 212 aa3.7□□□□□ -1.82
CIT1YNR001C FAR8Q05040 523 aa3.7□□□□□ -1.82
CIT1YNR001C DCS1Q06151 350 aa3.7□□□□□ -1.82
CIT1YNR001C NDL1Q06568 189 aa3.7□□□□□ -1.82
CIT1YNR001C VIK1Q12045 647 aa3.7□□□□□ -1.82
CIT1YNR001C BUG1Q12191 341 aa3.7□□□□□ -1.82
CIT1YNR001C MTR10Q99189 972 aa3.7□□□□□ -1.82
CIT1YNR001C SEY1Q99287 776 aa3.7□□□□□ -1.82
CIT1YNR001C RRP5Q05022 1729 aaKnown RBP3.7□□□□□ -1.82
CIT1YNR001C GCN1P33892 2672 aaKnown RBP3.7□□□□□ -1.82
CIT1YNR001C URB1P34241 1764 aaKnown RBP3.7□□□□□ -1.82
CIT1YNR001C CBP2P03874 630 aaPredicted RBP3.7□□□□□ -1.82
CIT1YNR001C AAC1P04710 309 aa3.7□□□□□ -1.82
CIT1YNR001C ILV5P06168 395 aaKnown RBP3.7□□□□□ -1.82
CIT1YNR001C CBP1P07252 654 aa3.7□□□□□ -1.82
CIT1YNR001C RPL31BP0C2H9 113 aaKnown RBP3.7□□□□□ -1.82
CIT1YNR001C SAM1P10659 382 aaKnown RBP3.7□□□□□ -1.82
CIT1YNR001C HNM1P19807 563 aa3.7□□□□□ -1.82
CIT1YNR001C PRP2P20095 876 aaPredicted RBP3.7□□□□□ -1.82
CIT1YNR001C YSP3P25036 478 aa3.7□□□□□ -1.82
CIT1YNR001C MRP4P32902 394 aa3.7□□□□□ -1.82
CIT1YNR001C HEK2P38199 381 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82not detected
CIT1YNR001C FES1P38260 290 aa3.7□□□□□ -1.82
CIT1YNR001C SIP3P38717 1229 aa3.7□□□□□ -1.82
CIT1YNR001C SSO2P39926 295 aa3.7□□□□□ -1.82
CIT1YNR001C SEC9P40357 651 aa3.7□□□□□ -1.82
CIT1YNR001C GCN20P43535 752 aaKnown RBP3.7□□□□□ -1.82
CIT1YNR001C LAM5P43560 674 aa3.7□□□□□ -1.82
CIT1YNR001C MIC19P43594 170 aa3.7□□□□□ -1.82
CIT1YNR001C LIA1P47120 325 aaKnown RBP3.7□□□□□ -1.82
CIT1YNR001C KEL2P50090 882 aa3.7□□□□□ -1.82
CIT1YNR001C HOP2P53187 214 aa3.7□□□□□ -1.82
CIT1YNR001C NMA2P53204 395 aa3.7□□□□□ -1.82
CIT1YNR001C TRS23Q03784 219 aa3.7□□□□□ -1.82
CIT1YNR001C TEN1Q07921 160 aa3.7□□□□□ -1.82
CIT1YNR001C DIS3Q08162 1001 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms