RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W YDL057WQ07379 328 aa2.02□□□□□ -2.09
RTT107YHR154W TSR1Q07381 788 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W YFH1Q07540 174 aa2.02□□□□□ -2.09
RTT107YHR154W NOP12Q08208 459 aaKnown RBP2.02□□□□□ -2.09
RTT107YHR154W CRT10Q08226 957 aa2.02□□□□□ -2.09
RTT107YHR154W VAM3Q12241 283 aa2.02□□□□□ -2.09
RTT107YHR154W PRB1P09232 635 aa2.01□□□□□ -2.09
RTT107YHR154W SPS4P09937 338 aa2.01□□□□□ -2.09
RTT107YHR154W RPL31BP0C2H9 113 aaKnown RBP2.01□□□□□ -2.09
RTT107YHR154W RNA1P11745 407 aaKnown RBP2.01□□□□□ -2.09
RTT107YHR154W ABF1P14164 731 aa2.01□□□□□ -2.09
RTT107YHR154W DBP3P20447 523 aaKnown RBP2.01□□□□□ -2.09
RTT107YHR154W SPS22P25380 463 aa2.01□□□□□ -2.09
RTT107YHR154W LAC1P28496 418 aa2.01□□□□□ -2.09
RTT107YHR154W HMX1P32339 317 aa2.01□□□□□ -2.09
RTT107YHR154W CBF5P33322 483 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
RTT107YHR154W ZTA1P38230 334 aaKnown RBP2.01□□□□□ -2.09
RTT107YHR154W ECM1P39715 212 aa2.01□□□□□ -2.09
RTT107YHR154W SSO2P39926 295 aa2.01□□□□□ -2.09
RTT107YHR154W ELP2P42935 788 aa2.01□□□□□ -2.09
RTT107YHR154W FAR3P46671 204 aa2.01□□□□□ -2.09
RTT107YHR154W SMC3P47037 1230 aa2.01□□□□□ -2.09
RTT107YHR154W MRPS35P53292 345 aa2.01□□□□□ -2.09
RTT107YHR154W PNG1Q02890 363 aa2.01□□□□□ -2.09
RTT107YHR154W PFA5Q03289 374 aa2.01□□□□□ -2.09
RTT107YHR154W ARO10Q06408 635 aa2.01□□□□□ -2.09
RTT107YHR154W MTR10Q99189 972 aa2.01□□□□□ -2.09
RTT107YHR154W GCN1P33892 2672 aaKnown RBP2.01□□□□□ -2.09
RTT107YHR154W BEM2P39960 2167 aaKnown RBP2.01□□□□□ -2.09
RTT107YHR154W FMP27Q06179 2628 aa2.01□□□□□ -2.09
RTT107YHR154W MSB1P21339 1137 aaKnown RBP2.01□□□□□ -2.09
RTT107YHR154W RPI1P23250 407 aaKnown RBP2.01□□□□□ -2.09
RTT107YHR154W RAD14P28519 371 aa2.01□□□□□ -2.09
RTT107YHR154W SPR1P32603 445 aa2.01□□□□□ -2.09
RTT107YHR154W YKL097CP34245 136 aa2.01□□□□□ -2.09
RTT107YHR154W YKT6P36015 200 aaKnown RBP2.01□□□□□ -2.09
RTT107YHR154W RPL32P38061 130 aaKnown RBP2.01□□□□□ -2.09
RTT107YHR154W SPP381P38282 291 aaPredicted RBP2.01□□□□□ -2.09
RTT107YHR154W VHC1P38329 1120 aa2.01□□□□□ -2.09
RTT107YHR154W MSG5P38590 489 aa2.01□□□□□ -2.09
RTT107YHR154W DBP8P38719 431 aa2.01□□□□□ -2.09
RTT107YHR154W ULP2P40537 1034 aaPredicted RBP2.01□□□□□ -2.09
RTT107YHR154W SWP82P43554 623 aa2.01□□□□□ -2.09
RTT107YHR154W DPB11P47027 764 aaPredicted RBP2.01□□□□□ -2.09
RTT107YHR154W ECL1P48235 211 aa2.01□□□□□ -2.09
RTT107YHR154W MND1P53102 219 aa2.01□□□□□ -2.09
RTT107YHR154W RTN1Q04947 295 aaKnown RBP2.01□□□□□ -2.09
RTT107YHR154W ARR3Q06598 404 aa2.01□□□□□ -2.09
RTT107YHR154W RXT3Q07458 294 aa2.01□□□□□ -2.09
RTT107YHR154W PEX27Q08580 376 aa2.01□□□□□ -2.09
RTT107YHR154W MED2Q12124 431 aa2.01□□□□□ -2.09
RTT107YHR154W USV1Q12132 391 aa2.01□□□□□ -2.09
RTT107YHR154W INP53Q12271 1107 aa2.01□□□□□ -2.09
RTT107YHR154W YOR012WQ12351 137 aa2.01□□□□□ -2.09
RTT107YHR154W YDL007C-AQ2V2Q0 85 aa2.01□□□□□ -2.09
RTT107YHR154W KSS1P14681 368 aa2□□□□□ -2.09
RTT107YHR154W SGV1P23293 657 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W MRPL25P23369 157 aa2□□□□□ -2.09
RTT107YHR154W PRR1P28708 518 aa2□□□□□ -2.09
RTT107YHR154W MSS51P32335 436 aa2□□□□□ -2.09
RTT107YHR154W SUA5P32579 426 aa2□□□□□ -2.09
RTT107YHR154W STE14P32584 239 aa2□□□□□ -2.09
RTT107YHR154W TPO5P36029 618 aa2□□□□□ -2.09
RTT107YHR154W ADE17P38009 592 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W SWC5P38326 303 aa2□□□□□ -2.09
RTT107YHR154W SDH8P38345 138 aa2□□□□□ -2.09
RTT107YHR154W YHR045WP38775 560 aa2□□□□□ -2.09
RTT107YHR154W PEX18P38855 283 aa2□□□□□ -2.09
RTT107YHR154W POP1P41812 875 aa2□□□□□ -2.09
RTT107YHR154W AIM22P47051 409 aa2□□□□□ -2.09
RTT107YHR154W COS5P47187 383 aa2□□□□□ -2.09
RTT107YHR154W SPT20P50875 604 aa2□□□□□ -2.09
RTT107YHR154W YGL185CP53100 379 aa2□□□□□ -2.09
RTT107YHR154W DIP5P53388 608 aa2□□□□□ -2.09
RTT107YHR154W IST1P53843 298 aaPredicted RBP2□□□□□ -2.09
RTT107YHR154W YNL134CP53912 376 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W WAR1Q03631 944 aa2□□□□□ -2.09
RTT107YHR154W RGC1Q06108 1083 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W COS7Q07788 383 aa2□□□□□ -2.09
RTT107YHR154W SLK19Q08581 821 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W TGS1Q12052 315 aa2□□□□□ -2.09
RTT107YHR154W LAA1P39526 2014 aa2□□□□□ -2.09
RTT107YHR154W CAR1P00812 333 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W CSM1P25651 190 aa2□□□□□ -2.09
RTT107YHR154W MRPL9P31334 269 aa2□□□□□ -2.09
RTT107YHR154W COY1P34237 679 aa2□□□□□ -2.09
RTT107YHR154W CBP4P37267 147 aa2□□□□□ -2.09
RTT107YHR154W PCF11P39081 626 aaPredicted RBP2□□□□□ -2.09
RTT107YHR154W SAP1P39955 897 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W HMF1P40037 129 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W AIM20P40451 204 aa2□□□□□ -2.09
RTT107YHR154W YRB1P41920 201 aaKnown RBP2□□□□□ -2.09
RTT107YHR154W NPA3P47122 385 aa2□□□□□ -2.09
RTT107YHR154W ECM27P47144 725 aa2□□□□□ -2.09
RTT107YHR154W YIP4P53093 235 aa2□□□□□ -2.09
RTT107YHR154W MPS2P53159 387 aa2□□□□□ -2.09
RTT107YHR154W COG2P53271 262 aa2□□□□□ -2.09
RTT107YHR154W YGR126WP53274 230 aa2□□□□□ -2.09
RTT107YHR154W FHN1P53279 174 aa2□□□□□ -2.09
RTT107YHR154W EFM6P53970 246 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 125.6 ms