RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C FLC3P53121 802 aa2.88□□□□□ -1.95
NMD2YHR077C IDP3P53982 420 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C RRP17Q04031 235 aaPredicted RBP2.88□□□□□ -1.95
NMD2YHR077C PPN1Q04119 674 aa2.88□□□□□ -1.95
NMD2YHR077C ERB1Q04660 807 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C GAL83Q04739 417 aa2.88□□□□□ -1.95
NMD2YHR077C RNH1Q04740 348 aa2.88□□□□□ -1.95
NMD2YHR077C YDR344CQ05510 147 aa2.88□□□□□ -1.95
NMD2YHR077C YLR345WQ06137 509 aa2.88□□□□□ -1.95
NMD2YHR077C TRM8Q12009 286 aa2.88□□□□□ -1.95
NMD2YHR077C CSF1Q12150 2958 aa2.88□□□□□ -1.95
NMD2YHR077C MSH5Q12175 901 aa2.88□□□□□ -1.95
NMD2YHR077C YGK3Q12222 375 aaPredicted RBP2.88□□□□□ -1.95
NMD2YHR077C YLR126CQ12288 251 aa2.88□□□□□ -1.95
NMD2YHR077C PST2Q12335 198 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C TRM10Q12400 293 aa2.88□□□□□ -1.95
NMD2YHR077C TY4B-PA0A0B7P3V8 1104 aa2.88□□□□□ -1.95
NMD2YHR077C RAS2P01120 322 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C RPS21AP0C0V8 87 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C NFT1P0CE68 1218 aa2.88□□□□□ -1.95
NMD2YHR077C ENA1P13587 1091 aa2.88□□□□□ -1.95
NMD2YHR077C YCL049CP25577 312 aa2.88□□□□□ -1.95
NMD2YHR077C SBA1P28707 216 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C IDH1P28834 360 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
NMD2YHR077C PUP2P32379 260 aa2.88□□□□□ -1.95
NMD2YHR077C CDC3P32457 520 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C RIB7P33312 244 aa2.88□□□□□ -1.95
NMD2YHR077C LHP1P33399 275 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C HCS1P34243 683 aa2.88□□□□□ -1.95
NMD2YHR077C KKQ8P36004 724 aa2.88□□□□□ -1.95
NMD2YHR077C MAK5P38112 773 aaPredicted RBP2.88□□□□□ -1.95
NMD2YHR077C COS111P38308 924 aa2.88□□□□□ -1.95
NMD2YHR077C YHR112CP38716 378 aa2.88□□□□□ -1.95
NMD2YHR077C SSZ1P38788 538 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C YPT35P38815 214 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C YHR127WP38833 243 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C AZF1P41696 914 aa2.88□□□□□ -1.95
NMD2YHR077C IRC5P43610 853 aa2.88□□□□□ -1.95
NMD2YHR077C RPA14P50106 137 aa2.88□□□□□ -1.95
NMD2YHR077C MON1P53129 644 aa2.88□□□□□ -1.95
NMD2YHR077C TWF1P53250 332 aa2.88□□□□□ -1.95
NMD2YHR077C ENA2Q01896 1091 aa2.88□□□□□ -1.95
NMD2YHR077C YKR005CQ02203 525 aa2.88□□□□□ -1.95
NMD2YHR077C MET31Q03081 177 aa2.88□□□□□ -1.95
NMD2YHR077C GSF2Q04697 403 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C RSA1Q08932 381 aa2.88□□□□□ -1.95
NMD2YHR077C ENA5Q12691 1091 aa2.88□□□□□ -1.95
NMD2YHR077C MED11Q99278 115 aa2.88□□□□□ -1.95
NMD2YHR077C Q0010Q9ZZX9 128 aa2.88□□□□□ -1.95
NMD2YHR077C KAR1P11927 433 aa2.88□□□□□ -1.95
NMD2YHR077C YPT52P36018 234 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C GMH1P36125 273 aa2.88□□□□□ -1.95
NMD2YHR077C CBP4P37267 147 aa2.88□□□□□ -1.95
NMD2YHR077C SPO73P40031 143 aa2.88□□□□□ -1.95
NMD2YHR077C MMF1P40185 145 aaKnown RBP2.88□□□□□ -1.95
NMD2YHR077C AIM20P40451 204 aa2.88□□□□□ -1.95
NMD2YHR077C SER33P40510 469 aa2.88□□□□□ -1.95
NMD2YHR077C SSU1P41930 458 aa2.88□□□□□ -1.95
NMD2YHR077C LSB6P42951 607 aa2.88□□□□□ -1.95
NMD2YHR077C YFL066CP43538 392 aa2.88□□□□□ -1.95
NMD2YHR077C YJR030CP47101 745 aa2.88□□□□□ -1.95
NMD2YHR077C SLD3P53135 668 aa2.88□□□□□ -1.95
NMD2YHR077C PRM8P53174 237 aa2.88□□□□□ -1.95
NMD2YHR077C IRC15Q02733 499 aa2.88□□□□□ -1.95
NMD2YHR077C YPL107WQ02873 248 aa2.88□□□□□ -1.95
NMD2YHR077C YMR034CQ05131 434 aaPredicted RBP2.88□□□□□ -1.95
NMD2YHR077C CLP1Q08685 445 aaPredicted RBP2.88□□□□□ -1.95
NMD2YHR077C YOR389WQ08912 624 aa2.88□□□□□ -1.95
NMD2YHR077C FLC1Q08967 793 aa2.88□□□□□ -1.95
NMD2YHR077C MNL2Q12205 849 aa2.88□□□□□ -1.95
NMD2YHR077C WHI5Q12416 295 aa2.88□□□□□ -1.95
NMD2YHR077C TEC1P18412 486 aa2.87□□□□□ -1.95
NMD2YHR077C EPT1P22140 391 aa2.87□□□□□ -1.95
NMD2YHR077C CDC5P32562 705 aa2.87□□□□□ -1.95
NMD2YHR077C MGM101P32787 269 aaKnown RBP2.87□□□□□ -1.95
NMD2YHR077C GDH2P33327 1092 aaKnown RBP2.87□□□□□ -1.95
NMD2YHR077C TPO5P36029 618 aa2.87□□□□□ -1.95
NMD2YHR077C RCN1P36054 211 aa2.87□□□□□ -1.95
NMD2YHR077C UPF3P48412 387 aaKnown RBP2.87□□□□□ -1.95
NMD2YHR077C MDM34P53083 459 aa2.87□□□□□ -1.95
NMD2YHR077C SWC4P53201 476 aa2.87□□□□□ -1.95
NMD2YHR077C TDA7P53882 636 aaPredicted RBP2.87□□□□□ -1.95
NMD2YHR077C YLR257WQ06146 321 aaKnown RBP2.87□□□□□ -1.95
NMD2YHR077C BRE4Q07660 1125 aa2.87□□□□□ -1.95
NMD2YHR077C GYP1Q08484 637 aa2.87□□□□□ -1.95
NMD2YHR077C VIK1Q12045 647 aa2.87□□□□□ -1.95
NMD2YHR077C NMD4Q12129 218 aa2.87□□□□□ -1.95
NMD2YHR077C HAL9Q12180 1030 aa2.87□□□□□ -1.95
NMD2YHR077C HER1Q12276 1246 aa2.87□□□□□ -1.95
NMD2YHR077C YDL199CQ12407 687 aa2.87□□□□□ -1.95
NMD2YHR077C LAT1P12695 482 aaKnown RBP2.87□□□□□ -1.95
NMD2YHR077C SPC34P36131 295 aa2.87□□□□□ -1.95
NMD2YHR077C AST2P39945 430 aaKnown RBP2.87□□□□□ -1.95
NMD2YHR077C PFA3P42836 336 aa2.87□□□□□ -1.95
NMD2YHR077C GYP8P43570 497 aa2.87□□□□□ -1.95
NMD2YHR077C BIR1P47134 954 aa2.87□□□□□ -1.95
NMD2YHR077C RIM21P48565 533 aa2.87□□□□□ -1.95
NMD2YHR077C GPI8P49018 411 aa2.87□□□□□ -1.95
NMD2YHR077C NBP35P52920 328 aa2.87□□□□□ -1.95
NMD2YHR077C LEE1Q02799 301 aaKnown RBP2.87□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms