RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	SNU114	P36048	1008 aa	Known RBP	3.88	□□□□□ -1.79
SPI1	YER150W	SRP102	P36057	244 aa	Predicted RBP	3.88	□□□□□ -1.79
SPI1	YER150W	FIG1	P38224	298 aa		3.88	□□□□□ -1.79
SPI1	YER150W	IML3	P38265	245 aa		3.88	□□□□□ -1.79
SPI1	YER150W	AME1	P38313	324 aa		3.88	□□□□□ -1.79
SPI1	YER150W	OSH3	P38713	996 aa	Known RBP	3.88	□□□□□ -1.79
SPI1	YER150W	SKN7	P38889	622 aa		3.88	□□□□□ -1.79
SPI1	YER150W	YEL020C	P39994	560 aa		3.88	□□□□□ -1.79
SPI1	YER150W	GID8	P40208	455 aa		3.88	□□□□□ -1.79
SPI1	YER150W	YMR147W	P40218	223 aa	Known RBP	3.88	□□□□□ -1.79
SPI1	YER150W	SEC24	P40482	926 aa	Known RBP	3.88	□□□□□ -1.79
SPI1	YER150W	ICE2	P40499	491 aa		3.88	□□□□□ -1.79
SPI1	YER150W	GAB1	P41733	394 aa		3.88	□□□□□ -1.79
SPI1	YER150W	STB2	P46679	850 aa		3.88	□□□□□ -1.79
SPI1	YER150W	YAR1	P46683	200 aa		3.88	□□□□□ -1.79
SPI1	YER150W	DPB11	P47027	764 aa	Predicted RBP	3.88	□□□□□ -1.79
SPI1	YER150W	RAI1	P53063	387 aa	Known RBP	3.88	□□□□□ -1.79
SPI1	YER150W	YGR045C	P53229	120 aa		3.88	□□□□□ -1.79
SPI1	YER150W	YDR541C	Q03049	344 aa		3.88	□□□□□ -1.79
SPI1	YER150W	EBS1	Q03466	884 aa	Known RBP	3.88	□□□□□ -1.79
SPI1	YER150W	RPC11	Q04307	110 aa	Predicted RBP	3.88	□□□□□ -1.79
SPI1	YER150W	SPO77	Q06134	477 aa		3.88	□□□□□ -1.79
SPI1	YER150W	ORM2	Q06144	216 aa		3.88	□□□□□ -1.79
SPI1	YER150W	MRPL35	Q06678	367 aa		3.88	□□□□□ -1.79
SPI1	YER150W	THI72	Q08579	599 aa		3.88	□□□□□ -1.79
SPI1	YER150W	DDC1	Q08949	612 aa		3.88	□□□□□ -1.79
SPI1	YER150W	YOR223W	Q12015	292 aa		3.88	□□□□□ -1.79
SPI1	YER150W	YOR029W	Q12243	111 aa		3.88	□□□□□ -1.79
SPI1	YER150W	YLR108C	Q12259	485 aa		3.88	□□□□□ -1.79
SPI1	YER150W	TY1A-DR3	Q12441	440 aa		3.88	□□□□□ -1.79
SPI1	YER150W	GPM1	P00950	247 aa	Known RBP	3.87	□□□□□ -1.79
SPI1	YER150W	RPP1A	P05318	106 aa	Predicted RBP	3.87	□□□□□ -1.79
SPI1	YER150W	RHO1	P06780	209 aa	Known RBP	3.87	□□□□□ -1.79
SPI1	YER150W	QCR2	P07257	368 aa		3.87	□□□□□ -1.79
SPI1	YER150W	ERG11	P10614	530 aa		3.87	□□□□□ -1.79
SPI1	YER150W	PYC1	P11154	1178 aa	Known RBP	3.87	□□□□□ -1.79
SPI1	YER150W	RPS5	P26783	225 aa	Known RBP	3.87	□□□□□ -1.79
SPI1	YER150W	YPS1	P32329	569 aa		3.87	□□□□□ -1.79
SPI1	YER150W	RIM1	P32445	135 aa	Known RBP	3.87	□□□□□ -1.79
SPI1	YER150W	UGP1	P32861	499 aa	Known RBP	3.87	□□□□□ -1.79
SPI1	YER150W	SSO1	P32867	290 aa		3.87	□□□□□ -1.79
SPI1	YER150W	PRP18	P33411	251 aa	Predicted RBP	3.87	□□□□□ -1.79
SPI1	YER150W	DBP7	P36120	742 aa	Known RBP	3.87	□□□□□ -1.79
SPI1	YER150W	RPF2	P36160	344 aa	Known RBP	3.87	□□□□□ -1.79
SPI1	YER150W	ALP1	P38971	573 aa		3.87	□□□□□ -1.79
SPI1	YER150W	HXT9	P40885	567 aa		3.87	□□□□□ -1.79
SPI1	YER150W	CIN5	P40917	295 aa		3.87	□□□□□ -1.79
SPI1	YER150W	YFL054C	P43549	646 aa		3.87	□□□□□ -1.79
SPI1	YER150W	NPA3	P47122	385 aa		3.87	□□□□□ -1.79
SPI1	YER150W	YGL117W	P53133	265 aa		3.87	□□□□□ -1.79
SPI1	YER150W	BUD9	P53226	547 aa		3.87	□□□□□ -1.79
SPI1	YER150W	YGR042W	P53227	271 aa		3.87	□□□□□ -1.79
SPI1	YER150W	HXT11	P54862	567 aa		3.87	□□□□□ -1.79
SPI1	YER150W	NAM8	Q00539	523 aa	Known RBP	3.87	□□□□□ -1.79
SPI1	YER150W	NUP116	Q02630	1113 aa		3.87	□□□□□ -1.79
SPI1	YER150W	CTF19	Q02732	369 aa		3.87	□□□□□ -1.79
SPI1	YER150W	FMP30	Q02883	468 aa		3.87	□□□□□ -1.79
SPI1	YER150W	YMR310C	Q04867	317 aa	Predicted RBP	3.87	□□□□□ -1.79
SPI1	YER150W	DUS4	Q06063	367 aa		3.87	□□□□□ -1.79
SPI1	YER150W	IPK1	Q06667	281 aa		3.87	□□□□□ -1.79
SPI1	YER150W	ESA1	Q08649	445 aa		3.87	□□□□□ -1.79
SPI1	YER150W	DAP1	Q12091	152 aa		3.87	□□□□□ -1.79
SPI1	YER150W	OSW2	Q12202	724 aa		3.87	□□□□□ -1.79
SPI1	YER150W	YOR012W	Q12351	137 aa		3.87	□□□□□ -1.79
SPI1	YER150W	PAA1	Q12447	191 aa	Known RBP	3.87	□□□□□ -1.79
SPI1	YER150W	RRD2	Q12461	358 aa		3.87	□□□□□ -1.79
SPI1	YER150W	NOT5	Q12514	560 aa	Predicted RBP	3.87	□□□□□ -1.79
SPI1	YER150W	COX2	P00410	251 aa		3.86	□□□□□ -1.79
SPI1	YER150W	PMR1	P13586	950 aa		3.86	□□□□□ -1.79
SPI1	YER150W	ABF1	P14164	731 aa		3.86	□□□□□ -1.79
SPI1	YER150W	FRS2	P15625	503 aa	Known RBP	3.86	□□□□□ -1.79
SPI1	YER150W	HXT2	P23585	541 aa		3.86	□□□□□ -1.79
SPI1	YER150W	URK1	P27515	501 aa		3.86	□□□□□ -1.79
SPI1	YER150W	PRE2	P30656	287 aa	Known RBP	3.86	□□□□□ -1.79
SPI1	YER150W	ECM25	P32525	599 aa		3.86	□□□□□ -1.79
SPI1	YER150W	RPD3	P32561	433 aa		3.86	□□□□□ -1.79
SPI1	YER150W	SPS19	P32573	292 aa	Known RBP	3.86	□□□□□ -1.79
SPI1	YER150W	FRE1	P32791	686 aa		3.86	□□□□□ -1.79
SPI1	YER150W	ELM1	P32801	640 aa		3.86	□□□□□ -1.79
SPI1	YER150W	EMP70	P32802	667 aa		3.86	□□□□□ -1.79
SPI1	YER150W	YOX1	P34161	385 aa		3.86	□□□□□ -1.79
SPI1	YER150W	ASC1	P38011	319 aa	Known RBP	3.86	□□□□□ -1.79
SPI1	YER150W	RIB1	P38066	345 aa		3.86	□□□□□ -1.79
SPI1	YER150W	DTR1	P38125	572 aa		3.86	□□□□□ -1.79
SPI1	YER150W	LDB7	P38210	180 aa		3.86	□□□□□ -1.79
SPI1	YER150W	OLA1	P38219	394 aa	Known RBP	3.86	□□□□□ -1.79
SPI1	YER150W	BMT2	P38278	337 aa		3.86	□□□□□ -1.79
SPI1	YER150W	STB5	P38699	743 aa		3.86	□□□□□ -1.79
SPI1	YER150W	PFS1	P38872	237 aa		3.86	□□□□□ -1.79
SPI1	YER150W	YHR210C	P38893	341 aa		3.86	□□□□□ -1.79
SPI1	YER150W	SAK1	P38990	1142 aa		3.86	□□□□□ -1.79
SPI1	YER150W	PLB1	P39105	664 aa		3.86	□□□□□ -1.79
SPI1	YER150W	PRP39	P39682	629 aa	Known RBP	3.86	□□□□□ -1.79
SPI1	YER150W	YIL108W	P40483	696 aa	Known RBP	3.86	□□□□□ -1.79
SPI1	YER150W	YFL066C	P43538	392 aa		3.86	□□□□□ -1.79
SPI1	YER150W	FMP33	P46998	180 aa		3.86	□□□□□ -1.79
SPI1	YER150W	SSY5	P47002	699 aa		3.86	□□□□□ -1.79
SPI1	YER150W	UBX6	P47049	396 aa		3.86	□□□□□ -1.79
SPI1	YER150W	APS3	P47064	194 aa		3.86	□□□□□ -1.79
SPI1	YER150W	MTR3	P48240	250 aa	Predicted RBP	3.86	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms