RNA–Protein interactions for RNA: YDR354W

TRP4, Transcript of Anthranilate phosphoribosyl transferase, yeast

Gene TRP4, Length 1,143 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRP4	YDR354W	RBS1	Q05672	457 aa	Known RBP	4.19	□□□□□ -1.74
TRP4	YDR354W	VPS38	Q05919	439 aa		4.19	□□□□□ -1.74
TRP4	YDR354W	RRI2	Q12348	645 aa		4.19	□□□□□ -1.74
TRP4	YDR354W	RKM5	Q12367	367 aa		4.19	□□□□□ -1.74
TRP4	YDR354W	KRE5	P22023	1365 aa		4.18	□□□□□ -1.74
TRP4	YDR354W	COR1	P07256	457 aa		4.18	□□□□□ -1.74
TRP4	YDR354W	EXO70	P19658	623 aa		4.18	□□□□□ -1.74
TRP4	YDR354W	PRP2	P20095	876 aa	Predicted RBP	4.18	□□□□□ -1.74
TRP4	YDR354W	OLE1	P21147	510 aa	Known RBP	4.18	□□□□□ -1.74
TRP4	YDR354W	PAP1	P29468	568 aa	Known RBP	4.18	□□□□□ -1.74
TRP4	YDR354W	YME1	P32795	747 aa		4.18	□□□□□ -1.74
TRP4	YDR354W	TSR2	Q06672	205 aa	Known RBP	4.18	□□□□□ -1.74
TRP4	YDR354W	AVL9	Q12500	764 aa		4.18	□□□□□ -1.74
TRP4	YDR354W	YRF1-4	O13559	1382 aa		4.17	□□□□□ -1.74
TRP4	YDR354W	SIR4	P11978	1358 aa		4.17	□□□□□ -1.74
TRP4	YDR354W	GLK1	P17709	500 aa	Known RBP	4.17	□□□□□ -1.74
TRP4	YDR354W	RNA14	P25298	677 aa	Known RBP	4.17	□□□□□ -1.74
TRP4	YDR354W	WBP1	P33767	430 aa	Known RBP	4.17	□□□□□ -1.74
TRP4	YDR354W	PEX5	P35056	612 aa		4.17	□□□□□ -1.74
TRP4	YDR354W	NOP4	P37838	685 aa	Known RBP	4.17	□□□□□ -1.74
TRP4	YDR354W	SRO77	P38163	1010 aa		4.17	□□□□□ -1.74
TRP4	YDR354W	TMA108	P40462	946 aa		4.17	□□□□□ -1.74
TRP4	YDR354W	ELP2	P42935	788 aa		4.17	□□□□□ -1.74
TRP4	YDR354W	MSO1	P53604	210 aa	Known RBP	4.17	□□□□□ -1.74
TRP4	YDR354W	PMR1	P13586	950 aa		4.16	□□□□□ -1.74
TRP4	YDR354W	PRD1	P25375	712 aa		4.16	□□□□□ -1.74
TRP4	YDR354W	CDC60	P26637	1090 aa	Known RBP	4.16	□□□□□ -1.74
TRP4	YDR354W	FUN19	P28003	413 aa	Predicted RBP	4.16	□□□□□ -1.74
TRP4	YDR354W	KEL1	P38853	1164 aa	Known RBP	4.16	□□□□□ -1.74
TRP4	YDR354W	MBB1	P39534	108 aa		4.16	□□□□□ -1.74
TRP4	YDR354W	DOT5	P40553	215 aa		4.16	□□□□□ -1.74
TRP4	YDR354W	YGR066C	P53242	292 aa		4.16	□□□□□ -1.74
TRP4	YDR354W	VPS75	P53853	264 aa		4.16	□□□□□ -1.74
TRP4	YDR354W	FIN1	Q03898	291 aa		4.16	□□□□□ -1.74
TRP4	YDR354W	HNT3	Q08702	217 aa		4.16	□□□□□ -1.74
TRP4	YDR354W	RIM15	P43565	1770 aa		4.16	□□□□□ -1.74
TRP4	YDR354W	PSK1	P31374	1356 aa		4.15	□□□□□ -1.74
TRP4	YDR354W	ROX1	P25042	368 aa		4.15	□□□□□ -1.75
TRP4	YDR354W	BRF1	P29056	596 aa		4.15	□□□□□ -1.75
TRP4	YDR354W	CAF130	P53280	1122 aa	Predicted RBP	4.15	□□□□□ -1.75
TRP4	YDR354W	SMA2	Q04658	369 aa		4.15	□□□□□ -1.75
TRP4	YDR354W	KEL3	Q08979	651 aa	Predicted RBP	4.15	□□□□□ -1.75
TRP4	YDR354W	YRF1-3	P0CX14	1859 aa		4.14	□□□□□ -1.75
TRP4	YDR354W	YRF1-7	P0CX15	1859 aa		4.14	□□□□□ -1.75
TRP4	YDR354W	YRF1-6	P53819	1859 aa		4.14	□□□□□ -1.75
TRP4	YDR354W	CDC31	P06704	161 aa	Known RBP	4.14	□□□□□ -1.75
TRP4	YDR354W	REV1	P12689	985 aa		4.14	□□□□□ -1.75
TRP4	YDR354W	CPR1	P14832	162 aa	Known RBP	4.14	□□□□□ -1.75
TRP4	YDR354W	ATP11	P32453	318 aa		4.14	□□□□□ -1.75
TRP4	YDR354W	CAB3	P36076	571 aa		4.14	□□□□□ -1.75
TRP4	YDR354W	NDE1	P40215	560 aa		4.14	□□□□□ -1.75
TRP4	YDR354W	GPI8	P49018	411 aa		4.14	□□□□□ -1.75
TRP4	YDR354W	RCF1	Q03713	159 aa		4.14	□□□□□ -1.75
TRP4	YDR354W	HSP42	Q12329	375 aa		4.14	□□□□□ -1.75
TRP4	YDR354W	YER078W-A	Q3E7A2	54 aa		4.14	□□□□□ -1.75
TRP4	YDR354W	TY1B-A	O13527	1196 aa	Known RBP	4.13	□□□□□ -1.75
TRP4	YDR354W	BUB3	P26449	341 aa		4.13	□□□□□ -1.75
TRP4	YDR354W	ANP1	P32629	500 aa		4.13	□□□□□ -1.75
TRP4	YDR354W	SWH1	P35845	1188 aa		4.13	□□□□□ -1.75
TRP4	YDR354W	FAU1	P40099	211 aa		4.13	□□□□□ -1.75
TRP4	YDR354W	PET130	P47065	347 aa		4.13	□□□□□ -1.75
TRP4	YDR354W	ARE2	P53629	642 aa	Known RBP	4.13	□□□□□ -1.75
TRP4	YDR354W	ARK1	P53974	638 aa		4.13	□□□□□ -1.75
TRP4	YDR354W	PIR3	Q03180	325 aa		4.13	□□□□□ -1.75
TRP4	YDR354W	PRP3	Q03338	469 aa	Predicted RBP	4.13	□□□□□ -1.75
TRP4	YDR354W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
TRP4	YDR354W	VPH1	P32563	840 aa	Known RBP	4.12	□□□□□ -1.75
TRP4	YDR354W	MRP4	P32902	394 aa		4.12	□□□□□ -1.75
TRP4	YDR354W	PXA2	P34230	853 aa		4.12	□□□□□ -1.75
TRP4	YDR354W	FRE2	P36033	711 aa		4.12	□□□□□ -1.75
TRP4	YDR354W	YEL057C	P39983	233 aa		4.12	□□□□□ -1.75
TRP4	YDR354W	SYG1	P40528	902 aa		4.12	□□□□□ -1.75
TRP4	YDR354W	MKT1	P40850	830 aa	Known RBP	4.12	□□□□□ -1.75
TRP4	YDR354W	VTC2	P43585	828 aa		4.12	□□□□□ -1.75
TRP4	YDR354W	ERO1	Q03103	563 aa		4.12	□□□□□ -1.75
TRP4	YDR354W	YDR341C	Q05506	607 aa	Known RBP	4.12	□□□□□ -1.75
TRP4	YDR354W	PLP2	Q12017	286 aa		4.12	□□□□□ -1.75
TRP4	YDR354W	GCN4	P03069	281 aa		4.11	□□□□□ -1.75
TRP4	YDR354W	LPD1	P09624	499 aa	Known RBP	4.11	□□□□□ -1.75
TRP4	YDR354W	HOM3	P10869	527 aa		4.11	□□□□□ -1.75
TRP4	YDR354W	MET8	P15807	274 aa		4.11	□□□□□ -1.75
TRP4	YDR354W	MRE11	P32829	692 aa		4.11	□□□□□ -1.75
TRP4	YDR354W	YBR225W	P38321	900 aa		4.11	□□□□□ -1.75
TRP4	YDR354W	RTR1	P40084	226 aa	Predicted RBP	4.11	□□□□□ -1.75
TRP4	YDR354W	POP1	P41812	875 aa		4.11	□□□□□ -1.75
TRP4	YDR354W	GCD10	P41814	478 aa		4.11	□□□□□ -1.75
TRP4	YDR354W	ATP22	P50273	684 aa	Predicted RBP	4.11	□□□□□ -1.75
TRP4	YDR354W	AVT4	P50944	713 aa		4.11	□□□□□ -1.75
TRP4	YDR354W	SLG1	P54867	378 aa		4.11	□□□□□ -1.75
TRP4	YDR354W	YDR239C	Q03780	787 aa		4.11	□□□□□ -1.75
TRP4	YDR354W	MFB1	Q04922	465 aa		4.11	□□□□□ -1.75
TRP4	YDR354W	YDL007C-A	Q2V2Q0	85 aa		4.11	□□□□□ -1.75
TRP4	YDR354W	HSP82	P02829	709 aa	Known RBP	4.1	□□□□□ -1.75
TRP4	YDR354W	RPL31B	P0C2H9	113 aa	Known RBP	4.1	□□□□□ -1.75
TRP4	YDR354W	KRR1	P25586	316 aa	Predicted RBP	4.1	□□□□□ -1.75
TRP4	YDR354W	RSM22	P36056	628 aa		4.1	□□□□□ -1.75
TRP4	YDR354W	APE4	P38821	490 aa		4.1	□□□□□ -1.75
TRP4	YDR354W	CAJ1	P39101	391 aa		4.1	□□□□□ -1.75
TRP4	YDR354W	PES4	P39684	611 aa		4.1	□□□□□ -1.75
TRP4	YDR354W	MEP1	P40260	492 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 62.5 ms