RNA–Protein interactions for RNA: YDL160C

DHH1, Transcript of Cytoplasmic DExD/H-box helicase, stimulates mRNA decapping, yeast

Gene DHH1, Length 1,521 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DHH1	YDL160C	YNK1	P36010	153 aa	Known RBP	4.82	□□□□□ -1.64
DHH1	YDL160C	RRP3	P38712	501 aa	Known RBP	4.82	□□□□□ -1.64
DHH1	YDL160C	FAD1	P38913	306 aa		4.82	□□□□□ -1.64
DHH1	YDL160C	MET30	P39014	640 aa		4.82	□□□□□ -1.64
DHH1	YDL160C	YTA12	P40341	825 aa		4.82	□□□□□ -1.64
DHH1	YDL160C	VHS2	P40463	436 aa		4.82	□□□□□ -1.64
DHH1	YDL160C	YJR011C	P47086	261 aa	Predicted RBP	4.82	□□□□□ -1.64
DHH1	YDL160C	RHO5	P53879	331 aa	Known RBP	4.82	□□□□□ -1.64
DHH1	YDL160C	IRC15	Q02733	499 aa		4.82	□□□□□ -1.64
DHH1	YDL160C	SOR2	Q07786	357 aa		4.82	□□□□□ -1.64
DHH1	YDL160C	YDL009C	Q12210	107 aa		4.82	□□□□□ -1.64
DHH1	YDL160C	COX3	P00420	269 aa		4.81	□□□□□ -1.64
DHH1	YDL160C	ISC1	P40015	477 aa	Known RBP	4.81	□□□□□ -1.64
DHH1	YDL160C	YIL169C	P40442	995 aa		4.81	□□□□□ -1.64
DHH1	YDL160C	TES1	P41903	349 aa	Known RBP	4.81	□□□□□ -1.64
DHH1	YDL160C	TRS85	P46944	698 aa		4.81	□□□□□ -1.64
DHH1	YDL160C	PCP1	P53259	346 aa		4.81	□□□□□ -1.64
DHH1	YDL160C	DSL1	P53847	754 aa		4.81	□□□□□ -1.64
DHH1	YDL160C	FMP42	Q04991	504 aa		4.81	□□□□□ -1.64
DHH1	YDL160C	YDR286C	Q05530	114 aa		4.81	□□□□□ -1.64
DHH1	YDL160C	MED2	Q12124	431 aa		4.81	□□□□□ -1.64
DHH1	YDL160C	NFI1	Q12216	726 aa		4.81	□□□□□ -1.64
DHH1	YDL160C	SPA2	P23201	1466 aa	Known RBP	4.81	□□□□□ -1.64
DHH1	YDL160C	EXO70	P19658	623 aa		4.8	□□□□□ -1.64
DHH1	YDL160C	RPI1	P23250	407 aa	Known RBP	4.8	□□□□□ -1.64
DHH1	YDL160C	YCR022C	P25620	114 aa		4.8	□□□□□ -1.64
DHH1	YDL160C	APE2	P32454	952 aa	Known RBP	4.8	□□□□□ -1.64
DHH1	YDL160C	FRE2	P36033	711 aa		4.8	□□□□□ -1.64
DHH1	YDL160C	ASC1	P38011	319 aa	Known RBP	4.8	□□□□□ -1.64
DHH1	YDL160C	PCA1	P38360	1216 aa		4.8	□□□□□ -1.64
DHH1	YDL160C	PES4	P39684	611 aa		4.8	□□□□□ -1.64
DHH1	YDL160C	YML122C	Q03207	126 aa		4.8	□□□□□ -1.64
DHH1	YDL160C	CAR1	P00812	333 aa	Known RBP	4.79	□□□□□ -1.64
DHH1	YDL160C	SCEI	P03882	235 aa		4.79	□□□□□ -1.64
DHH1	YDL160C	YND1	P40009	630 aa		4.79	□□□□□ -1.64
DHH1	YDL160C	IKS1	P47042	667 aa		4.79	□□□□□ -1.64
DHH1	YDL160C	YPL107W	Q02873	248 aa		4.79	□□□□□ -1.64
DHH1	YDL160C	SMF3	Q12078	473 aa	Predicted RBP	4.79	□□□□□ -1.64
DHH1	YDL160C	RGT2	Q12300	763 aa		4.79	□□□□□ -1.64
DHH1	YDL160C	RIM1	P32445	135 aa	Known RBP	4.78	□□□□□ -1.64
DHH1	YDL160C	ECM25	P32525	599 aa		4.78	□□□□□ -1.64
DHH1	YDL160C	SWH1	P35845	1188 aa		4.78	□□□□□ -1.64
DHH1	YDL160C	RRN10	P38204	145 aa		4.78	□□□□□ -1.64
DHH1	YDL160C	RRP4	P38792	359 aa	Known RBP	4.78	□□□□□ -1.64
DHH1	YDL160C	SRL1	Q08673	210 aa		4.78	□□□□□ -1.64
DHH1	YDL160C	PGC1	Q08959	321 aa		4.78	□□□□□ -1.64
DHH1	YDL160C	PMR1	P13586	950 aa		4.77	□□□□□ -1.65
DHH1	YDL160C	YCR041W	P37265	110 aa		4.77	□□□□□ -1.65
DHH1	YDL160C	PHO86	P46956	311 aa		4.77	□□□□□ -1.65
DHH1	YDL160C	VPS74	Q06385	345 aa		4.77	□□□□□ -1.65
DHH1	YDL160C	RSM22	P36056	628 aa		4.77	□□□□□ -1.65
DHH1	YDL160C	RIM2	P38127	377 aa		4.77	□□□□□ -1.65
DHH1	YDL160C	PFF1	P38244	976 aa		4.77	□□□□□ -1.65
DHH1	YDL160C	GWT1	P47026	490 aa		4.77	□□□□□ -1.65
DHH1	YDL160C	GPI8	P49018	411 aa		4.77	□□□□□ -1.65
DHH1	YDL160C	EOS1	P53938	366 aa		4.77	□□□□□ -1.65
DHH1	YDL160C	SKS1	Q12505	502 aa		4.77	□□□□□ -1.65
DHH1	YDL160C	ADE4	P04046	510 aa	Known RBP	4.76	□□□□□ -1.65
DHH1	YDL160C	YCR100C	P25606	316 aa		4.76	□□□□□ -1.65
DHH1	YDL160C	LAS1	P36146	502 aa	Predicted RBP	4.76	□□□□□ -1.65
DHH1	YDL160C	HAT2	P39984	401 aa		4.76	□□□□□ -1.65
DHH1	YDL160C	DIM1	P41819	318 aa	Known RBP	4.76	□□□□□ -1.65
DHH1	YDL160C	ELP2	P42935	788 aa		4.76	□□□□□ -1.65
DHH1	YDL160C	YIP1	P53039	248 aa		4.76	□□□□□ -1.65
DHH1	YDL160C	PPM1	Q04081	328 aa		4.76	□□□□□ -1.65
DHH1	YDL160C	YLR281C	Q05863	155 aa		4.76	□□□□□ -1.65
DHH1	YDL160C	CUE5	Q08412	411 aa	Known RBP	4.76	□□□□□ -1.65
DHH1	YDL160C	MRS3	P10566	314 aa		4.75	□□□□□ -1.65
DHH1	YDL160C	SEC1	P30619	724 aa	Known RBP	4.75	□□□□□ -1.65
DHH1	YDL160C	ATS1	P31386	333 aa		4.75	□□□□□ -1.65
DHH1	YDL160C	SMY1	P32364	656 aa	Known RBP	4.75	□□□□□ -1.65
DHH1	YDL160C	POP2	P39008	433 aa		4.75	□□□□□ -1.65
DHH1	YDL160C	ARK1	P53974	638 aa		4.75	□□□□□ -1.65
DHH1	YDL160C	RPM2	Q02773	1202 aa		4.75	□□□□□ -1.65
DHH1	YDL160C	PNG1	Q02890	363 aa		4.75	□□□□□ -1.65
DHH1	YDL160C	PRP42	Q03776	544 aa	Known RBP	4.75	□□□□□ -1.65
DHH1	YDL160C	SSN2	P38931	1420 aa		4.74	□□□□□ -1.65
DHH1	YDL160C	HIS4	P00815	799 aa	Known RBP	4.74	□□□□□ -1.65
DHH1	YDL160C	PDE2	P06776	526 aa		4.74	□□□□□ -1.65
DHH1	YDL160C	YAR066W	P0CX18	203 aa		4.74	□□□□□ -1.65
DHH1	YDL160C	YHR214W	P0CX19	203 aa		4.74	□□□□□ -1.65
DHH1	YDL160C	CDC23	P16522	626 aa		4.74	□□□□□ -1.65
DHH1	YDL160C	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
DHH1	YDL160C	NDC1	P32500	655 aa		4.74	□□□□□ -1.65
DHH1	YDL160C	PTR2	P32901	601 aa		4.74	□□□□□ -1.65
DHH1	YDL160C	MLH1	P38920	769 aa		4.74	□□□□□ -1.65
DHH1	YDL160C	SHO1	P40073	367 aa		4.74	□□□□□ -1.65
DHH1	YDL160C	MEP1	P40260	492 aa		4.74	□□□□□ -1.65
DHH1	YDL160C	PIB2	P53191	635 aa		4.74	□□□□□ -1.65
DHH1	YDL160C	GIP3	Q03016	1276 aa		4.74	□□□□□ -1.65
DHH1	YDL160C	ILV5	P06168	395 aa	Known RBP	4.73	□□□□□ -1.65
DHH1	YDL160C	ALG1	P16661	449 aa		4.73	□□□□□ -1.65
DHH1	YDL160C	DAP2	P18962	818 aa		4.73	□□□□□ -1.65
DHH1	YDL160C	YPT53	P36019	220 aa		4.73	□□□□□ -1.65
DHH1	YDL160C	YSW1	P38280	609 aa		4.73	□□□□□ -1.65
DHH1	YDL160C	BZZ1	P38822	633 aa		4.73	□□□□□ -1.65
DHH1	YDL160C	GCD10	P41814	478 aa		4.73	□□□□□ -1.65
DHH1	YDL160C	HMS2	P47175	358 aa		4.73	□□□□□ -1.65
DHH1	YDL160C	MLC1	P53141	149 aa		4.73	□□□□□ -1.65
DHH1	YDL160C	SNT309	Q06091	175 aa	Predicted RBP	4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms