RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeastyeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TSR1YDL060W ASI1P54074 624 aa3.67□□□□□ -1.82
TSR1YDL060W TAF12Q03761 539 aa3.67□□□□□ -1.82
TSR1YDL060W YDR179W-AQ03983 463 aa3.67□□□□□ -1.82
TSR1YDL060W THI7Q05998 598 aa3.67□□□□□ -1.82
TSR1YDL060W DCS1Q06151 350 aa3.67□□□□□ -1.82
TSR1YDL060W CRN1Q06440 651 aa3.67□□□□□ -1.82
TSR1YDL060W IES3Q12345 250 aa3.67□□□□□ -1.82
TSR1YDL060W APC2Q12440 853 aa3.67□□□□□ -1.82
TSR1YDL060W BUD5P25300 642 aaPredicted RBP3.67□□□□□ -1.82
TSR1YDL060W NIP100P33420 868 aa3.67□□□□□ -1.82
TSR1YDL060W RPC25P35718 212 aa3.67□□□□□ -1.82
TSR1YDL060W KDX1P36005 433 aa3.67□□□□□ -1.82
TSR1YDL060W YBP1P38315 674 aa3.67□□□□□ -1.82
TSR1YDL060W BFR1P38934 470 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82 RIP-Chip
TSR1YDL060W BPL1P48445 690 aaPredicted RBP3.67□□□□□ -1.82
TSR1YDL060W AQR1P53943 586 aa3.67□□□□□ -1.82
TSR1YDL060W YAT1P80235 687 aa3.67□□□□□ -1.82
TSR1YDL060W URH1Q04179 340 aa3.67□□□□□ -1.82
TSR1YDL060W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
TSR1YDL060W PFK27Q12471 397 aaPredicted RBP3.67□□□□□ -1.82
TSR1YDL060W YBR255C-AQ3E776 120 aa3.67□□□□□ -1.82
TSR1YDL060W TFB5Q3E7C1 72 aaPredicted RBP3.67□□□□□ -1.82
TSR1YDL060W MRP13P12686 339 aa3.66□□□□□ -1.82
TSR1YDL060W KGD1P20967 1014 aaKnown RBP3.66□□□□□ -1.82
TSR1YDL060W PDE1P22434 369 aa3.66□□□□□ -1.82
TSR1YDL060W PPH22P23595 377 aa3.66□□□□□ -1.82
TSR1YDL060W YSP3P25036 478 aa3.66□□□□□ -1.82
TSR1YDL060W AFG1P32317 509 aa3.66□□□□□ -1.82
TSR1YDL060W RAD5P32849 1169 aaPredicted RBP3.66□□□□□ -1.82
TSR1YDL060W MRPL7P36519 292 aa3.66□□□□□ -1.82
TSR1YDL060W SDH8P38345 138 aa3.66□□□□□ -1.82
TSR1YDL060W HSM3P38348 480 aa3.66□□□□□ -1.82
TSR1YDL060W AST2P39945 430 aaKnown RBP3.66□□□□□ -1.82
TSR1YDL060W BUR6P40096 142 aa3.66□□□□□ -1.82
TSR1YDL060W ALG5P40350 334 aa3.66□□□□□ -1.82
TSR1YDL060W NUP84P52891 726 aa3.66□□□□□ -1.82
TSR1YDL060W RPM2Q02773 1202 aa3.66□□□□□ -1.82
TSR1YDL060W RSM28Q03430 361 aa3.66□□□□□ -1.82
TSR1YDL060W TRS23Q03784 219 aa3.66□□□□□ -1.82
TSR1YDL060W MRI1Q06489 411 aaKnown RBP3.66□□□□□ -1.82
TSR1YDL060W MCP2Q06567 569 aa3.66□□□□□ -1.82
TSR1YDL060W SIL1Q08199 421 aa3.66□□□□□ -1.82
TSR1YDL060W BBP1Q12365 385 aa3.66□□□□□ -1.82
TSR1YDL060W GAL7P08431 366 aa3.66□□□□□ -1.82
TSR1YDL060W DSF1P0CX08 502 aa3.66□□□□□ -1.82
TSR1YDL060W YNR073CP0CX09 502 aa3.66□□□□□ -1.82
TSR1YDL060W TAL1P15019 335 aaKnown RBP3.66□□□□□ -1.82
TSR1YDL060W OSM1P21375 501 aaKnown RBP3.66□□□□□ -1.82
TSR1YDL060W MRPL25P23369 157 aa3.66□□□□□ -1.82
TSR1YDL060W IDH2P28241 369 aaKnown RBP3.66□□□□□ -1.82
TSR1YDL060W ACP1P32463 125 aa3.66□□□□□ -1.82
TSR1YDL060W TUL1P36096 758 aa3.66□□□□□ -1.82
TSR1YDL060W HEK2P38199 381 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
TSR1YDL060W FAR7P43592 221 aa3.66□□□□□ -1.82
TSR1YDL060W ASN1P49089 572 aaKnown RBP3.66□□□□□ -1.82
TSR1YDL060W YNL143CP53908 130 aa3.66□□□□□ -1.82
TSR1YDL060W ACL4Q03771 387 aa3.66□□□□□ -1.82
TSR1YDL060W TAP42Q04372 366 aa3.66□□□□□ -1.82
TSR1YDL060W YDR061WQ12298 539 aa3.66□□□□□ -1.82
TSR1YDL060W YER175W-AQ8TGU4 54 aa3.66□□□□□ -1.82
TSR1YDL060W YLR278CQ05854 1341 aa3.65□□□□□ -1.82
TSR1YDL060W MF(ALPHA)1P01149 165 aa3.65□□□□□ -1.83
TSR1YDL060W EFB1P32471 206 aaKnown RBP3.65□□□□□ -1.83
TSR1YDL060W SSE2P32590 693 aaKnown RBP3.65□□□□□ -1.83
TSR1YDL060W UTP11P34247 250 aaPredicted RBP3.65□□□□□ -1.83
TSR1YDL060W SMC2P38989 1170 aaKnown RBP3.65□□□□□ -1.83
TSR1YDL060W YTA12P40341 825 aa3.65□□□□□ -1.83
TSR1YDL060W NMD5P46970 1048 aa3.65□□□□□ -1.83
TSR1YDL060W HAM1P47119 197 aaKnown RBP3.65□□□□□ -1.83
TSR1YDL060W YGR149WP48236 432 aa3.65□□□□□ -1.83
TSR1YDL060W MRM2P53123 320 aa3.65□□□□□ -1.83
TSR1YDL060W CWC21Q03375 135 aaKnown RBP3.65□□□□□ -1.83
TSR1YDL060W FIN1Q03898 291 aa3.65□□□□□ -1.83
TSR1YDL060W YPL216WQ08964 1102 aa3.65□□□□□ -1.83
TSR1YDL060W PUT4P15380 627 aa3.65□□□□□ -1.83
TSR1YDL060W HNM1P19807 563 aa3.65□□□□□ -1.83
TSR1YDL060W SPS22P25380 463 aa3.65□□□□□ -1.83
TSR1YDL060W YUH1P35127 236 aa3.65□□□□□ -1.83
TSR1YDL060W MLH1P38920 769 aa3.65□□□□□ -1.83
TSR1YDL060W STB2P46679 850 aa3.65□□□□□ -1.83
TSR1YDL060W GCD14P46959 383 aaPredicted RBP3.65□□□□□ -1.83
TSR1YDL060W YJL132WP47014 750 aa3.65□□□□□ -1.83
TSR1YDL060W DCP2P53550 970 aaKnown RBP3.65□□□□□ -1.83
TSR1YDL060W OSH6Q02201 448 aa3.65□□□□□ -1.83
TSR1YDL060W SMD2Q06217 110 aaKnown RBP3.65□□□□□ -1.83
TSR1YDL060W RRT8Q08219 342 aa3.65□□□□□ -1.83
TSR1YDL060W FRE3Q08905 711 aa3.65□□□□□ -1.83
TSR1YDL060W ULA1Q12059 462 aa3.65□□□□□ -1.83
TSR1YDL060W GPA2P10823 449 aa3.64□□□□□ -1.83
TSR1YDL060W UBA1P22515 1024 aaKnown RBP3.64□□□□□ -1.83
TSR1YDL060W AST1P35183 429 aa3.64□□□□□ -1.83
TSR1YDL060W NTR2P36118 322 aaPredicted RBP3.64□□□□□ -1.83
TSR1YDL060W MRPL4P36517 319 aa3.64□□□□□ -1.83
TSR1YDL060W CTM1P38818 585 aa3.64□□□□□ -1.83
TSR1YDL060W ELP2P42935 788 aa3.64□□□□□ -1.83
TSR1YDL060W TDA10P42938 290 aa3.64□□□□□ -1.83
TSR1YDL060W LAM5P43560 674 aa3.64□□□□□ -1.83
TSR1YDL060W EFM3P47163 339 aa3.64□□□□□ -1.83
TSR1YDL060W MRPL1Q04599 285 aa3.64□□□□□ -1.83
TSR1YDL060W MSC3Q05812 728 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms