RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C CMS1Q07897 291 aaKnown RBP5.55□□□□□ -1.52
SEC18YBR080C YLR040CQ07988 224 aa5.55□□□□□ -1.52
SEC18YBR080C GRE1Q08969 168 aa5.55□□□□□ -1.52
SEC18YBR080C YOR029WQ12243 111 aa5.55□□□□□ -1.52
SEC18YBR080C TY1A-NL1Q12391 440 aaKnown RBP5.55□□□□□ -1.52
SEC18YBR080C PDC5P16467 563 aaKnown RBP5.55□□□□□ -1.52
SEC18YBR080C SNU114P36048 1008 aaKnown RBP5.55□□□□□ -1.52
SEC18YBR080C AAP1P37898 856 aaKnown RBP5.55□□□□□ -1.52
SEC18YBR080C DUG2P38149 878 aa5.55□□□□□ -1.52
SEC18YBR080C SDH8P38345 138 aa5.55□□□□□ -1.52
SEC18YBR080C NPA3P47122 385 aa5.55□□□□□ -1.52
SEC18YBR080C MTL1P53214 551 aa5.55□□□□□ -1.52
SEC18YBR080C DIA1P54005 336 aa5.55□□□□□ -1.52
SEC18YBR080C YDR541CQ03049 344 aa5.55□□□□□ -1.52
SEC18YBR080C CHS1P08004 1131 aa5.54□□□□□ -1.52
SEC18YBR080C FRS2P15625 503 aaKnown RBP5.54□□□□□ -1.52
SEC18YBR080C PBN1P25580 416 aa5.54□□□□□ -1.52
SEC18YBR080C YSC83P32792 385 aa5.54□□□□□ -1.52
SEC18YBR080C MRPL7P36519 292 aa5.54□□□□□ -1.52
SEC18YBR080C ALP1P38971 573 aa5.54□□□□□ -1.52
SEC18YBR080C SAD1P43589 448 aa5.54□□□□□ -1.52
SEC18YBR080C GMC2Q06201 188 aa5.54□□□□□ -1.52
SEC18YBR080C RXT3Q07458 294 aa5.54□□□□□ -1.52
SEC18YBR080C NCE102Q12207 173 aaRIP-Chip data5.54□□□□□ -1.52not detected
SEC18YBR080C GSY2P27472 705 aa5.54□□□□□ -1.52
SEC18YBR080C GMH1P36125 273 aa5.54□□□□□ -1.52
SEC18YBR080C STP2P38704 541 aa5.54□□□□□ -1.52
SEC18YBR080C YEL020CP39994 560 aa5.54□□□□□ -1.52
SEC18YBR080C PCL6P40038 420 aa5.54□□□□□ -1.52
SEC18YBR080C MIG2P53035 382 aa5.54□□□□□ -1.52
SEC18YBR080C YGL108CP53139 140 aa5.54□□□□□ -1.52
SEC18YBR080C YNL092WP53934 400 aa5.54□□□□□ -1.52
SEC18YBR080C PIG1Q06216 648 aa5.54□□□□□ -1.52
SEC18YBR080C INP53Q12271 1107 aa5.54□□□□□ -1.52
SEC18YBR080C RMD5Q12508 421 aa5.54□□□□□ -1.52
SEC18YBR080C ADE4P04046 510 aaKnown RBP5.53□□□□□ -1.52
SEC18YBR080C RHO1P06780 209 aaKnown RBP5.53□□□□□ -1.52
SEC18YBR080C NFT1P0CE68 1218 aa5.53□□□□□ -1.52
SEC18YBR080C RPS16AP0CX51 143 aaKnown RBP5.53□□□□□ -1.52
SEC18YBR080C RPS16BP0CX52 143 aaKnown RBP5.53□□□□□ -1.52
SEC18YBR080C PMR1P13586 950 aa5.53□□□□□ -1.52
SEC18YBR080C THR4P16120 514 aaKnown RBP5.53□□□□□ -1.52
SEC18YBR080C AMD2P22580 549 aa5.53□□□□□ -1.52
SEC18YBR080C CNA1P23287 553 aa5.53□□□□□ -1.52
SEC18YBR080C IMG1P25626 169 aa5.53□□□□□ -1.52
SEC18YBR080C SIN4P32259 974 aa5.53□□□□□ -1.52
SEC18YBR080C BCS1P32839 456 aa5.53□□□□□ -1.52
SEC18YBR080C PAD1P33751 242 aaKnown RBP RIP-Chip data5.53□□□□□ -1.52not detected
SEC18YBR080C COS9P36034 407 aa5.53□□□□□ -1.52
SEC18YBR080C YPK3P38070 525 aa5.53□□□□□ -1.52
SEC18YBR080C MMS21P38632 267 aa5.53□□□□□ -1.52
SEC18YBR080C YNL146WP53906 100 aa5.53□□□□□ -1.52
SEC18YBR080C MTQ1P53944 314 aa5.53□□□□□ -1.52
SEC18YBR080C RPS15Q01855 142 aaKnown RBP5.53□□□□□ -1.52
SEC18YBR080C AIM33Q04516 312 aa5.53□□□□□ -1.52
SEC18YBR080C GRS2Q06817 618 aa5.53□□□□□ -1.52
SEC18YBR080C YDR262WQ12331 272 aa5.53□□□□□ -1.52
SEC18YBR080C RPL24AP04449 155 aaKnown RBP5.53□□□□□ -1.52
SEC18YBR080C APL1P27351 700 aa5.53□□□□□ -1.52
SEC18YBR080C UIP3P39547 235 aa5.53□□□□□ -1.52
SEC18YBR080C SPG5P42933 373 aa5.53□□□□□ -1.52
SEC18YBR080C RPN11P43588 306 aaKnown RBP5.53□□□□□ -1.52
SEC18YBR080C YHC3P47040 408 aa5.53□□□□□ -1.52
SEC18YBR080C ZPR1P53303 486 aaKnown RBP5.53□□□□□ -1.52
SEC18YBR080C SLI1P53304 468 aa5.53□□□□□ -1.52
SEC18YBR080C YNL260CP53846 198 aa5.53□□□□□ -1.52
SEC18YBR080C CDC123Q05791 360 aa5.53□□□□□ -1.52
SEC18YBR080C TPO1Q07824 586 aa5.53□□□□□ -1.52
SEC18YBR080C DSE3Q08729 430 aa5.53□□□□□ -1.52
SEC18YBR080C YPL216WQ08964 1102 aa5.53□□□□□ -1.52
SEC18YBR080C YDL176WQ12027 708 aa5.53□□□□□ -1.52
SEC18YBR080C SPO24Q3E752 67 aa5.53□□□□□ -1.52
SEC18YBR080C YCL012CQ8J0M4 134 aa5.53□□□□□ -1.52
SEC18YBR080C RAD9P14737 1309 aa5.52□□□□□ -1.53
SEC18YBR080C CDC21P06785 304 aa5.52□□□□□ -1.53
SEC18YBR080C ZRC1P20107 442 aa5.52□□□□□ -1.53
SEC18YBR080C KRE2P27809 442 aa5.52□□□□□ -1.53
SEC18YBR080C HES1P35843 434 aa5.52□□□□□ -1.53
SEC18YBR080C RSM22P36056 628 aa5.52□□□□□ -1.53
SEC18YBR080C RPS10BP46784 105 aaKnown RBP5.52□□□□□ -1.53
SEC18YBR080C TRM112P53738 135 aaPredicted RBP5.52□□□□□ -1.53
SEC18YBR080C NUP116Q02630 1113 aa5.52□□□□□ -1.53
SEC18YBR080C ADH2P00331 348 aaKnown RBP5.51□□□□□ -1.53
SEC18YBR080C COX1P00401 534 aa5.51□□□□□ -1.53
SEC18YBR080C KGD2P19262 463 aaPredicted RBP5.51□□□□□ -1.53
SEC18YBR080C SAR1P20606 190 aaKnown RBP5.51□□□□□ -1.53
SEC18YBR080C ARA1P38115 344 aa5.51□□□□□ -1.53
SEC18YBR080C QDR3P38227 689 aa5.51□□□□□ -1.53
SEC18YBR080C PEX7P39108 375 aa5.51□□□□□ -1.53
SEC18YBR080C ATG27P46989 271 aa5.51□□□□□ -1.53
SEC18YBR080C UBX6P47049 396 aa5.51□□□□□ -1.53
SEC18YBR080C YDL186WP48568 277 aa5.51□□□□□ -1.53
SEC18YBR080C FMP30Q02883 468 aa5.51□□□□□ -1.53
SEC18YBR080C PDR8Q06149 701 aa5.51□□□□□ -1.53
SEC18YBR080C RPS10AQ08745 105 aaPredicted RBP5.51□□□□□ -1.53
SEC18YBR080C VIK1Q12045 647 aa5.51□□□□□ -1.53
SEC18YBR080C YPR022CQ12139 1133 aa5.51□□□□□ -1.53
SEC18YBR080C AI5_ALPHAQ9ZZX1 630 aa5.51□□□□□ -1.53
SEC18YBR080C ADE5,7P07244 802 aaKnown RBP5.51□□□□□ -1.53
SEC18YBR080C GDH1P07262 454 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms