RNA–Protein interactions for RNA: YBR030W

RKM3, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM3, Length 1,659 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM3	YBR030W	GCD14	P46959	383 aa	Predicted RBP	4.1	□□□□□ -1.75
RKM3	YBR030W	PNC1	P53184	216 aa	Known RBP	4.1	□□□□□ -1.75
RKM3	YBR030W	SHR3	Q02774	210 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	PDR8	Q06149	701 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	MCH4	Q08268	501 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
RKM3	YBR030W	PEP5	P12868	1029 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	GSY2	P27472	705 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	HSP104	P31539	908 aa	Known RBP	4.1	□□□□□ -1.75
RKM3	YBR030W	ECM25	P32525	599 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	RPC34	P32910	317 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	RPT5	P33297	434 aa	Known RBP	4.1	□□□□□ -1.75
RKM3	YBR030W	KAP104	P38217	918 aa	Known RBP	4.1	□□□□□ -1.75
RKM3	YBR030W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
RKM3	YBR030W	YJL043W	P47053	257 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	YJR011C	P47086	261 aa	Predicted RBP	4.1	□□□□□ -1.75
RKM3	YBR030W	YJR154W	P47181	346 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	ORC5	P50874	479 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	PKP2	P53170	491 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	SUN4	P53616	420 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	APM1	Q00776	475 aa	Predicted RBP	4.1	□□□□□ -1.75
RKM3	YBR030W	STD1	Q02794	444 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	YLR297W	Q05899	129 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	NSE1	Q07913	336 aa		4.1	□□□□□ -1.75
RKM3	YBR030W	MES1	P00958	751 aa	Known RBP	4.09	□□□□□ -1.76
RKM3	YBR030W	SEC62	P21825	274 aa		4.09	□□□□□ -1.76
RKM3	YBR030W	FUN19	P28003	413 aa	Predicted RBP	4.09	□□□□□ -1.76
RKM3	YBR030W	YMC1	P32331	307 aa		4.09	□□□□□ -1.76
RKM3	YBR030W	COY1	P34237	679 aa		4.09	□□□□□ -1.76
RKM3	YBR030W	STP2	P38704	541 aa		4.09	□□□□□ -1.76
RKM3	YBR030W	YHR177W	P38867	453 aa		4.09	□□□□□ -1.76
RKM3	YBR030W	YPS6	P40583	537 aa		4.09	□□□□□ -1.76
RKM3	YBR030W	HXT9	P40885	567 aa		4.09	□□□□□ -1.76
RKM3	YBR030W	POP1	P41812	875 aa		4.09	□□□□□ -1.76
RKM3	YBR030W	LAM5	P43560	674 aa		4.09	□□□□□ -1.76
RKM3	YBR030W	BRO1	P48582	844 aa		4.09	□□□□□ -1.76
RKM3	YBR030W	EAF7	P53911	425 aa	Known RBP	4.09	□□□□□ -1.76
RKM3	YBR030W	HSP31	Q04432	237 aa		4.09	□□□□□ -1.76
RKM3	YBR030W	SUC2	P00724	532 aa		4.08	□□□□□ -1.76
RKM3	YBR030W	BI2	P03873	423 aa		4.08	□□□□□ -1.76
RKM3	YBR030W	RNR2	P09938	399 aa	Known RBP	4.08	□□□□□ -1.76
RKM3	YBR030W	THR4	P16120	514 aa	Known RBP	4.08	□□□□□ -1.76
RKM3	YBR030W	SAT4	P25333	603 aa	Known RBP	4.08	□□□□□ -1.76
RKM3	YBR030W	REC114	P32841	428 aa		4.08	□□□□□ -1.76
RKM3	YBR030W	ERG7	P38604	731 aa		4.08	□□□□□ -1.76
RKM3	YBR030W	INM1	P38710	295 aa		4.08	□□□□□ -1.76
RKM3	YBR030W	PCF11	P39081	626 aa	Predicted RBP	4.08	□□□□□ -1.76
RKM3	YBR030W	YMR124W	P39523	943 aa	Known RBP	4.08	□□□□□ -1.76
RKM3	YBR030W	IAH1	P41734	238 aa		4.08	□□□□□ -1.76
RKM3	YBR030W	CWC21	Q03375	135 aa	Known RBP	4.08	□□□□□ -1.76
RKM3	YBR030W	APC5	Q08683	685 aa		4.08	□□□□□ -1.76
RKM3	YBR030W	PKH2	Q12236	1081 aa	Known RBP	4.08	□□□□□ -1.76
RKM3	YBR030W	RUP1	Q12242	671 aa		4.08	□□□□□ -1.76
RKM3	YBR030W	STE2	D6VTK4	431 aa		4.07	□□□□□ -1.76
RKM3	YBR030W	TDH1	P00360	332 aa	Known RBP	4.07	□□□□□ -1.76
RKM3	YBR030W	BAR1	P12630	587 aa		4.07	□□□□□ -1.76
RKM3	YBR030W	YKL070W	P36087	169 aa		4.07	□□□□□ -1.76
RKM3	YBR030W	LAG1	P38703	411 aa		4.07	□□□□□ -1.76
RKM3	YBR030W	ARN1	P38731	627 aa		4.07	□□□□□ -1.76
RKM3	YBR030W	RTT107	P38850	1070 aa		4.07	□□□□□ -1.76
RKM3	YBR030W	END3	P39013	349 aa		4.07	□□□□□ -1.76
RKM3	YBR030W	PAC11	P40960	533 aa		4.07	□□□□□ -1.76
RKM3	YBR030W	SLI1	P53304	468 aa		4.07	□□□□□ -1.76
RKM3	YBR030W	YPL014W	Q02606	381 aa		4.07	□□□□□ -1.76
RKM3	YBR030W	SNT309	Q06091	175 aa	Predicted RBP	4.07	□□□□□ -1.76
RKM3	YBR030W	ACF2	Q12168	779 aa		4.07	□□□□□ -1.76
RKM3	YBR030W	BUG1	Q12191	341 aa		4.07	□□□□□ -1.76
RKM3	YBR030W	RDL1	Q12305	139 aa	Known RBP	4.07	□□□□□ -1.76
RKM3	YBR030W	CHD1	P32657	1468 aa		4.07	□□□□□ -1.76
RKM3	YBR030W	YPT1	P01123	206 aa	Known RBP	4.06	□□□□□ -1.76
RKM3	YBR030W	CDC21	P06785	304 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	CHS1	P08004	1131 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	KIN3	P22209	435 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	RPS2	P25443	254 aa	Known RBP	4.06	□□□□□ -1.76
RKM3	YBR030W	PPZ1	P26570	692 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	MRPL37	P36532	105 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	YBL028C	P38202	106 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	SWC5	P38326	303 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	CTM1	P38818	585 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	TOM71	P38825	639 aa	Known RBP	4.06	□□□□□ -1.76
RKM3	YBR030W	PHO90	P39535	881 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	SDS3	P40505	327 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	TRS85	P46944	698 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	YHC3	P47040	408 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	STB4	P50104	949 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	RIB4	P50861	169 aa	Predicted RBP	4.06	□□□□□ -1.76
RKM3	YBR030W	YGL185C	P53100	379 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	DBP6	P53734	629 aa	Known RBP	4.06	□□□□□ -1.76
RKM3	YBR030W	SPO19	Q03029	223 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	MCP2	Q06567	569 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	RDR1	Q08904	546 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	MAS1	P10507	462 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	UNG1	P12887	359 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	UGA1	P17649	471 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	HXT2	P23585	541 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	DMC1	P25453	334 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	SMY1	P32364	656 aa	Known RBP	4.06	□□□□□ -1.76
RKM3	YBR030W	CYS4	P32582	507 aa	Known RBP	4.06	□□□□□ -1.76
RKM3	YBR030W	RAD24	P32641	659 aa		4.06	□□□□□ -1.76
RKM3	YBR030W	RGT1	P32862	1170 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms