RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 IQCF3P0C7M6 154 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 SUPT20HL2P0C7V6 817 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 CASTP20810 708 aaKnown RBP18.89■□□□□ 0.61
COLCA2-207ENST00000639470 SP4Q02446 784 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 LAMC2Q13753 1193 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 KIAA0753Q2KHM9 967 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 SGMS1Q86VZ5 419 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 TRIM50Q86XT4 487 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 SMARCC2Q8TAQ2 1214 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 PGBD1Q96JS3 809 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 MTA3Q9BTC8 594 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 ZNF576Q9H609 170 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 MAP3K20Q9NYL2 800 aaKnown RBP18.89■□□□□ 0.61
COLCA2-207ENST00000639470 SEC63Q9UGP8 760 aaKnown RBP18.89■□□□□ 0.61
COLCA2-207ENST00000639470 NOD1Q9Y239 953 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 KIAA1217Q5T5P2 1943 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 CNTNAP5Q8WYK1 1306 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 SCN5AQ14524 2016 aa18.89■□□□□ 0.61
COLCA2-207ENST00000639470 HOXD8P13378 290 aaPredicted RBP18.88■□□□□ 0.61
COLCA2-207ENST00000639470 FUT2Q10981 343 aa18.88■□□□□ 0.61
COLCA2-207ENST00000639470 WWC2Q6AWC2 1192 aa18.88■□□□□ 0.61
COLCA2-207ENST00000639470 HEATR3Q7Z4Q2 680 aa18.88■□□□□ 0.61
COLCA2-207ENST00000639470 TMCO2Q7Z6W1 182 aaPredicted RBP18.88■□□□□ 0.61
COLCA2-207ENST00000639470 INPP4AQ96PE3 977 aaPredicted RBP18.88■□□□□ 0.61
COLCA2-207ENST00000639470 C16orf70Q9BSU1 422 aa18.88■□□□□ 0.61
COLCA2-207ENST00000639470 SEZ6LQ9BYH1 1024 aa18.88■□□□□ 0.61
COLCA2-207ENST00000639470 FAM217BQ9NTX9 383 aaPredicted RBP18.88■□□□□ 0.61
COLCA2-207ENST00000639470 GTF2IRD1Q9UHL9 959 aa18.88■□□□□ 0.61
COLCA2-207ENST00000639470 ADAMTS3O15072 1205 aa18.87■□□□□ 0.61
COLCA2-207ENST00000639470 PPFIA3O75145 1194 aa18.87■□□□□ 0.61
COLCA2-207ENST00000639470 ARHGEF15O94989 841 aa18.87■□□□□ 0.61
COLCA2-207ENST00000639470 CDC27P30260 824 aa18.87■□□□□ 0.61
COLCA2-207ENST00000639470 CYFIP1Q7L576 1253 aa18.87■□□□□ 0.61
COLCA2-207ENST00000639470 TMTC2Q8N394 836 aa18.87■□□□□ 0.61
COLCA2-207ENST00000639470 USP38Q8NB14 1042 aa18.87■□□□□ 0.61
COLCA2-207ENST00000639470 MAFAQ8NHW3 353 aaPredicted RBP18.87■□□□□ 0.61
COLCA2-207ENST00000639470 OSBPL7Q9BZF2 842 aa18.87■□□□□ 0.61
COLCA2-207ENST00000639470 CDH23Q9H251 3354 aa18.87■□□□□ 0.61
COLCA2-207ENST00000639470 PRDM12Q9H4Q4 367 aa18.87■□□□□ 0.61
COLCA2-207ENST00000639470 PKD2L1Q9P0L9 805 aa18.87■□□□□ 0.61
COLCA2-207ENST00000639470 KLF18A0A0U1RQI7 1052 aa18.86■□□□□ 0.61
COLCA2-207ENST00000639470 SPATA31C2B4DYI2 1134 aa18.86■□□□□ 0.61
COLCA2-207ENST00000639470 FOSL2P15408 326 aa18.86■□□□□ 0.61
COLCA2-207ENST00000639470 GNAQP50148 359 aa18.86■□□□□ 0.61
COLCA2-207ENST00000639470 PTPN11Q06124 597 aaPredicted RBP18.86■□□□□ 0.61
COLCA2-207ENST00000639470 RNF20Q5VTR2 975 aa18.86■□□□□ 0.61
COLCA2-207ENST00000639470 DHX32Q7L7V1 743 aaKnown RBP18.86■□□□□ 0.61
COLCA2-207ENST00000639470 SPRED2Q7Z698 418 aa18.86■□□□□ 0.61
COLCA2-207ENST00000639470 SESTD1Q86VW0 696 aa18.86■□□□□ 0.61
COLCA2-207ENST00000639470 SAMD3Q8N6K7 520 aa18.86■□□□□ 0.61
COLCA2-207ENST00000639470 LZTS2Q9BRK4 669 aa18.86■□□□□ 0.61
COLCA2-207ENST00000639470 PSTPIP2Q9H939 334 aa18.86■□□□□ 0.61
COLCA2-207ENST00000639470 MLXIPQ9HAP2 919 aa18.86■□□□□ 0.61
COLCA2-207ENST00000639470 NAP1L2Q9ULW6 460 aaPredicted RBP18.86■□□□□ 0.61
COLCA2-207ENST00000639470 SNX14Q9Y5W7 946 aa18.86■□□□□ 0.61
COLCA2-207ENST00000639470 ATP9AO75110 1047 aa18.85■□□□□ 0.61
COLCA2-207ENST00000639470 LGALS2P05162 132 aa18.85■□□□□ 0.61
COLCA2-207ENST00000639470 CALM1P0DP23 149 aa18.85■□□□□ 0.61
COLCA2-207ENST00000639470 CALM2P0DP24 149 aa18.85■□□□□ 0.61
COLCA2-207ENST00000639470 CALM3P0DP25 149 aa18.85■□□□□ 0.61
COLCA2-207ENST00000639470 SMARCA1P28370 1054 aa18.85■□□□□ 0.61
COLCA2-207ENST00000639470 APOBRQ0VD83 1088 aa18.85■□□□□ 0.61
COLCA2-207ENST00000639470 TRAF1Q13077 416 aa18.85■□□□□ 0.61
COLCA2-207ENST00000639470 TRIM71Q2Q1W2 868 aaKnown RBP18.85■□□□□ 0.61
COLCA2-207ENST00000639470 PCNX4Q63HM2 1172 aa18.85■□□□□ 0.61
COLCA2-207ENST00000639470 TRAF7Q6Q0C0 670 aa18.85■□□□□ 0.61
COLCA2-207ENST00000639470 C7orf31Q8N865 590 aa18.85■□□□□ 0.61
COLCA2-207ENST00000639470 CUL5Q93034 780 aa18.85■□□□□ 0.61
COLCA2-207ENST00000639470 FTOQ9C0B1 505 aaKnown RBP eCLIP18.85■□□□□ 0.61
COLCA2-207ENST00000639470 SLC4A7Q9Y6M7 1214 aa18.85■□□□□ 0.61
COLCA2-207ENST00000639470 GOLGA8AA7E2F4 631 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 GOLGA8BA8MQT2 603 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 PIK3CDO00329 1044 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 PITPNM1O00562 1244 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 NBNO60934 754 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 CKBP12277 381 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 ITGB5P18084 799 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 ICAM3P32942 547 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 ADGRE1Q14246 886 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 MBTPS1Q14703 1052 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 RTN1Q16799 776 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 TSGA10IPQ3SY00 556 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 UTP14CQ5TAP6 766 aaKnown RBP18.84■□□□□ 0.61
COLCA2-207ENST00000639470 RPUSD2Q8IZ73 545 aaKnown RBP18.84■□□□□ 0.61
COLCA2-207ENST00000639470 RETREG2Q8NC44 543 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 JAKMIP1Q96N16 626 aaKnown RBP18.84■□□□□ 0.61
COLCA2-207ENST00000639470 GPR20Q99678 358 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 PRDM6Q9NQX0 595 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 TMEM260Q9NX78 707 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 V9GY48 417 aaPredicted RBP18.84■□□□□ 0.61
COLCA2-207ENST00000639470 EYSQ5T1H1 3165 aa18.84■□□□□ 0.61
COLCA2-207ENST00000639470 ZBTB43O43298 467 aa18.83■□□□□ 0.6
COLCA2-207ENST00000639470 FIBPO43427 364 aa18.83■□□□□ 0.6
COLCA2-207ENST00000639470 ATP2A2P16615 1042 aaKnown RBP18.83■□□□□ 0.6
COLCA2-207ENST00000639470 ADD1P35611 737 aaKnown RBP18.83■□□□□ 0.6
COLCA2-207ENST00000639470 BFSP2Q13515 415 aa18.83■□□□□ 0.6
COLCA2-207ENST00000639470 ZNF618Q5T7W0 954 aa18.83■□□□□ 0.6
COLCA2-207ENST00000639470 LRRC8DQ7L1W4 858 aa18.83■□□□□ 0.6
COLCA2-207ENST00000639470 KCNB2Q92953 911 aa18.83■□□□□ 0.6
COLCA2-207ENST00000639470 PCDHA6Q9UN73 950 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms