RNA–Protein interactions for RNA: ENST00000636881.1

CHD2-226, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 3,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-226ENST00000636881 DDX42Q86XP3 938 aaKnown RBP eCLIP9.36□□□□□ -0.91
CHD2-226ENST00000636881 USP38Q8NB14 1042 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 NOD2Q9HC29 1040 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 SWAP70Q9UH65 585 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 ANAPC4Q9UJX5 808 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 ERVV-2B6SEH9 535 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 CEP104O60308 925 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 DNAJC8O75937 253 aaPredicted RBP9.36□□□□□ -0.91
CHD2-226ENST00000636881 KLRC1P26715 233 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 BCAMP50895 628 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 MAGOHP61326 146 aaKnown RBP9.36□□□□□ -0.91
CHD2-226ENST00000636881 RPS6KA1Q15418 735 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 GIGYF2Q6Y7W6 1299 aaKnown RBP9.36□□□□□ -0.91
CHD2-226ENST00000636881 TAX1BP1Q86VP1 789 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 CCDC63Q8NA47 563 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 CCDC197Q8NCU1 140 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 ZCRB1Q8TBF4 217 aaKnown RBP9.36□□□□□ -0.91
CHD2-226ENST00000636881 TBC1D22AQ8WUA7 517 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 MAGOHBQ96A72 148 aaKnown RBP9.36□□□□□ -0.91
CHD2-226ENST00000636881 CARD10Q9BWT7 1032 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 SEMA6BQ9H3T3 888 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 FBXL5Q9UKA1 691 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 PCDHA4Q9UN74 947 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 ATP6V1G2O95670 118 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 GHRP10912 638 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 KIF5BP33176 963 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 ARID5AQ03989 594 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 SF3A3Q12874 501 aaKnown RBP eCLIP9.36□□□□□ -0.917e-11■■■■□ 19.6
CHD2-226ENST00000636881 HLFQ16534 295 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 MEI1Q5TIA1 1274 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 ANKS4BQ8N8V4 417 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 CABLES1Q8TDN4 633 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 BAP1Q92560 729 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 TATDN2Q93075 761 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 INPP4AQ96PE3 977 aaPredicted RBP9.36□□□□□ -0.91
CHD2-226ENST00000636881 KDM4CQ9H3R0 1056 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 CNOT8Q9UFF9 292 aaKnown RBP9.36□□□□□ -0.91
CHD2-226ENST00000636881 PCDH11XQ9BZA7 1347 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 PCDH11YQ9BZA8 1340 aa9.36□□□□□ -0.91
CHD2-226ENST00000636881 C5orf60A6NFR6 353 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 SERPING1P05155 500 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 ELF3P78545 371 aaPredicted RBP9.35□□□□□ -0.91
CHD2-226ENST00000636881 NAB2Q15742 525 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 UAP1Q16222 522 aaPredicted RBP9.35□□□□□ -0.91
CHD2-226ENST00000636881 KIAA0753Q2KHM9 967 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 NAIF1Q69YI7 327 aaPredicted RBP9.35□□□□□ -0.91
CHD2-226ENST00000636881 PNMA8AQ86V59 439 aaPredicted RBP9.35□□□□□ -0.91
CHD2-226ENST00000636881 STAG2Q8N3U4 1231 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 TCP11Q8WWU5 503 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 TBC1D5Q92609 795 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 TSG101Q99816 390 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 C7orf25Q9BPX7 421 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 MGRN1O60291 552 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 CLTAP09496 248 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 RAPGEF1Q13905 1077 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 PROCA1Q8NCQ7 364 aaPredicted RBP9.35□□□□□ -0.91
CHD2-226ENST00000636881 CUL5Q93034 780 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 CALML4Q96GE6 196 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 DOCK2Q92608 1830 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 ORC4O43929 436 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 NMT2O60551 498 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 TRIM37O94972 964 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 IRX1P78414 480 aaPredicted RBP9.35□□□□□ -0.91
CHD2-226ENST00000636881 MYO1EQ12965 1108 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 BYSLQ13895 437 aaKnown RBP9.35□□□□□ -0.91
CHD2-226ENST00000636881 ASTE1Q2TB18 679 aaPredicted RBP9.35□□□□□ -0.91
CHD2-226ENST00000636881 FAM47AQ5JRC9 791 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 TLDC1Q6P9B6 456 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 DNAJC10Q8IXB1 793 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 KIAA0895Q8NCT3 520 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 CCT6BQ92526 530 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 CHMP6Q96FZ7 201 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 PSMD1Q99460 953 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 EDEM3Q9BZQ6 932 aa9.35□□□□□ -0.91
CHD2-226ENST00000636881 NUCKS1Q9H1E3 243 aaKnown RBP9.35□□□□□ -0.91
CHD2-226ENST00000636881 BCORQ6W2J9 1755 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 CCT8L1PA6NM43 557 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 CTNND1O60716 968 aaKnown RBP9.34□□□□□ -0.91
CHD2-226ENST00000636881 GCKP35557 465 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 SLC8A3P57103 927 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 ZKSCAN8Q15776 578 aaPredicted RBP9.34□□□□□ -0.91
CHD2-226ENST00000636881 PTPROQ16827 1216 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 TXNRD1Q16881 649 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 ACCSLQ4AC99 568 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 LRRC15Q8TF66 581 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 HOOK2Q96ED9 719 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 SELENOSQ9BQE4 189 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 LSM14BQ9BX40 385 aaKnown RBP9.34□□□□□ -0.91
CHD2-226ENST00000636881 AP1M1Q9BXS5 423 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 CNOT10Q9H9A5 744 aaKnown RBP9.34□□□□□ -0.91
CHD2-226ENST00000636881 MYH3P11055 1940 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 A0A0G2JS52 829 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 H0YGN5 161 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 LAD1O00515 517 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 SKAP2O75563 359 aaPredicted RBP9.34□□□□□ -0.91
CHD2-226ENST00000636881 DRD4P21917 467 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 POLR2FP61218 127 aaKnown RBP9.34□□□□□ -0.91
CHD2-226ENST00000636881 DYNLL1P63167 89 aaKnown RBP9.34□□□□□ -0.91
CHD2-226ENST00000636881 HGSNATQ68CP4 663 aa9.34□□□□□ -0.91
CHD2-226ENST00000636881 CENPPQ6IPU0 288 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms