RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 FAM184AQ8NB25 1140 aa22.44■■□□□ 1.18
SHKBP1-214ENST00000597396 TSEN34Q9BSV6 310 aaKnown RBP22.44■■□□□ 1.18
SHKBP1-214ENST00000597396 SENP6Q9GZR1 1112 aaPredicted RBP22.44■■□□□ 1.18
SHKBP1-214ENST00000597396 GJB4Q9NTQ9 266 aa22.44■■□□□ 1.18
SHKBP1-214ENST00000597396 ZEB2O60315 1214 aa22.43■■□□□ 1.18
SHKBP1-214ENST00000597396 TGFB3P10600 412 aa22.43■■□□□ 1.18
SHKBP1-214ENST00000597396 ICAM3P32942 547 aa22.43■■□□□ 1.18
SHKBP1-214ENST00000597396 NKX3-2P78367 333 aa22.43■■□□□ 1.18
SHKBP1-214ENST00000597396 KCNA10Q16322 511 aa22.43■■□□□ 1.18
SHKBP1-214ENST00000597396 BRDTQ58F21 947 aaPredicted RBP22.43■■□□□ 1.18
SHKBP1-214ENST00000597396 FERMT2Q96AC1 680 aa22.43■■□□□ 1.18
SHKBP1-214ENST00000597396 GPRASP2Q96D09 838 aa22.43■■□□□ 1.18
SHKBP1-214ENST00000597396 BRMS1Q9HCU9 246 aa22.43■■□□□ 1.18
SHKBP1-214ENST00000597396 PHF24Q9UPV7 400 aa22.43■■□□□ 1.18
SHKBP1-214ENST00000597396 UBIAD1Q9Y5Z9 338 aa22.43■■□□□ 1.18
SHKBP1-214ENST00000597396 MOXD2PA6NHM9 499 aa22.42■■□□□ 1.18
SHKBP1-214ENST00000597396 CTAGE5O15320 804 aa22.42■■□□□ 1.18
SHKBP1-214ENST00000597396 COL6A1P12109 1028 aa22.42■■□□□ 1.18
SHKBP1-214ENST00000597396 CPT1AP50416 773 aa22.42■■□□□ 1.18
SHKBP1-214ENST00000597396 DHX37Q8IY37 1157 aaKnown RBP22.42■■□□□ 1.18
SHKBP1-214ENST00000597396 CDHR1Q96JP9 859 aa22.42■■□□□ 1.18
SHKBP1-214ENST00000597396 SPATA31C2B4DYI2 1134 aa22.41■■□□□ 1.18
SHKBP1-214ENST00000597396 GGPS1O95749 300 aa22.41■■□□□ 1.18
SHKBP1-214ENST00000597396 ASGR1P07306 291 aa22.41■■□□□ 1.18
SHKBP1-214ENST00000597396 UBA1P22314 1058 aaKnown RBP22.41■■□□□ 1.18
SHKBP1-214ENST00000597396 ACLYP53396 1101 aa22.41■■□□□ 1.18
SHKBP1-214ENST00000597396 ARHGAP1Q07960 439 aa22.41■■□□□ 1.18
SHKBP1-214ENST00000597396 NPY5RQ15761 445 aa22.41■■□□□ 1.18
SHKBP1-214ENST00000597396 KRT25Q7Z3Z0 450 aa22.41■■□□□ 1.18
SHKBP1-214ENST00000597396 C8orf76Q96K31 380 aa22.41■■□□□ 1.18
SHKBP1-214ENST00000597396 MXRA8Q9BRK3 442 aa22.41■■□□□ 1.18
SHKBP1-214ENST00000597396 JADE2Q9NQC1 790 aa22.41■■□□□ 1.18
SHKBP1-214ENST00000597396 A0A1W2PQ45 241 aaPredicted RBP22.4■■□□□ 1.18
SHKBP1-214ENST00000597396 A0A1W2PQY0 241 aa22.4■■□□□ 1.18
SHKBP1-214ENST00000597396 SORBS3O60504 671 aa22.4■■□□□ 1.18
SHKBP1-214ENST00000597396 ITGB5P18084 799 aa22.4■■□□□ 1.18
SHKBP1-214ENST00000597396 KRT2P35908 639 aa22.4■■□□□ 1.18
SHKBP1-214ENST00000597396 FXR1P51114 621 aaKnown RBP eCLIP22.4■■□□□ 1.18
SHKBP1-214ENST00000597396 SEMA3FQ13275 785 aa22.4■■□□□ 1.18
SHKBP1-214ENST00000597396 MTMR1Q13613 665 aa22.4■■□□□ 1.18
SHKBP1-214ENST00000597396 LAMC2Q13753 1193 aa22.4■■□□□ 1.18
SHKBP1-214ENST00000597396 CEP55Q53EZ4 464 aa22.4■■□□□ 1.18
SHKBP1-214ENST00000597396 KRT40Q6A162 431 aa22.4■■□□□ 1.18
SHKBP1-214ENST00000597396 CCSAPQ6IQ19 270 aaPredicted RBP22.4■■□□□ 1.18
SHKBP1-214ENST00000597396 VTI1AQ96AJ9 217 aa22.4■■□□□ 1.18
SHKBP1-214ENST00000597396 MLXIPQ9HAP2 919 aa22.4■■□□□ 1.18
SHKBP1-214ENST00000597396 KIF3AQ9Y496 699 aa22.4■■□□□ 1.18
SHKBP1-214ENST00000597396 CCDC194A0A1B0GVG4 234 aa22.39■■□□□ 1.17
SHKBP1-214ENST00000597396 M0R2N6 131 aa22.39■■□□□ 1.17
SHKBP1-214ENST00000597396 MYL3P08590 195 aa22.39■■□□□ 1.17
SHKBP1-214ENST00000597396 CYP3A4P08684 503 aa22.39■■□□□ 1.17
SHKBP1-214ENST00000597396 ATN1P54259 1190 aaPredicted RBP22.39■■□□□ 1.17
SHKBP1-214ENST00000597396 SP2Q02086 613 aa22.39■■□□□ 1.17
SHKBP1-214ENST00000597396 NEDD9Q14511 834 aa22.39■■□□□ 1.17
SHKBP1-214ENST00000597396 NONOQ15233 471 aaKnown RBP eCLIP22.39■■□□□ 1.17
SHKBP1-214ENST00000597396 CELF3Q5SZQ8 465 aaKnown RBP22.39■■□□□ 1.17
SHKBP1-214ENST00000597396 CHRDL2Q6WN34 429 aa22.39■■□□□ 1.17
SHKBP1-214ENST00000597396 AFG1LQ8WV93 481 aa22.39■■□□□ 1.17
SHKBP1-214ENST00000597396 GLT1D1Q96MS3 346 aa22.39■■□□□ 1.17
SHKBP1-214ENST00000597396 POLR3EQ9NVU0 708 aa22.39■■□□□ 1.17
SHKBP1-214ENST00000597396 MAFGO15525 162 aa22.38■■□□□ 1.17
SHKBP1-214ENST00000597396 MMP1P03956 469 aa22.38■■□□□ 1.17
SHKBP1-214ENST00000597396 GUCY1B3Q02153 619 aa22.38■■□□□ 1.17
SHKBP1-214ENST00000597396 SAFBQ15424 915 aaKnown RBP eCLIP22.38■■□□□ 1.17
SHKBP1-214ENST00000597396 GIMAP8Q8ND71 665 aaPredicted RBP22.38■■□□□ 1.17
SHKBP1-214ENST00000597396 CYP2W1Q8TAV3 490 aa22.38■■□□□ 1.17
SHKBP1-214ENST00000597396 OXER1Q8TDS5 423 aa22.38■■□□□ 1.17
SHKBP1-214ENST00000597396 TBCKQ8TEA7 893 aa22.38■■□□□ 1.17
SHKBP1-214ENST00000597396 CRYGNQ8WXF5 182 aa22.38■■□□□ 1.17
SHKBP1-214ENST00000597396 EMID1Q96A84 441 aaPredicted RBP22.38■■□□□ 1.17
SHKBP1-214ENST00000597396 SPATA33Q96N06 139 aa22.38■■□□□ 1.17
SHKBP1-214ENST00000597396 STARD7Q9NQZ5 370 aa22.38■■□□□ 1.17
SHKBP1-214ENST00000597396 PKD2L1Q9P0L9 805 aa22.38■■□□□ 1.17
SHKBP1-214ENST00000597396 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.38■■□□□ 1.17
SHKBP1-214ENST00000597396 NR2E3Q9Y5X4 410 aa22.38■■□□□ 1.17
SHKBP1-214ENST00000597396 A6NJR5 290 aa22.37■■□□□ 1.17
SHKBP1-214ENST00000597396 MMP3P08254 477 aa22.37■■□□□ 1.17
SHKBP1-214ENST00000597396 MYSM1Q5VVJ2 828 aa22.37■■□□□ 1.17
SHKBP1-214ENST00000597396 CXCL17Q6UXB2 119 aa22.37■■□□□ 1.17
SHKBP1-214ENST00000597396 CYFIP1Q7L576 1253 aa22.37■■□□□ 1.17
SHKBP1-214ENST00000597396 NIPA1Q7RTP0 329 aa22.37■■□□□ 1.17
SHKBP1-214ENST00000597396 PLA2G4DQ86XP0 818 aa22.37■■□□□ 1.17
SHKBP1-214ENST00000597396 SENP7Q9BQF6 1050 aa22.37■■□□□ 1.17
SHKBP1-214ENST00000597396 KCNH7Q9NS40 1196 aa22.37■■□□□ 1.17
SHKBP1-214ENST00000597396 SMC3Q9UQE7 1217 aa22.37■■□□□ 1.17
SHKBP1-214ENST00000597396 SCN10AQ9Y5Y9 1956 aa22.36■■□□□ 1.17
SHKBP1-214ENST00000597396 MEIS1O00470 390 aa22.36■■□□□ 1.17
SHKBP1-214ENST00000597396 KPNA6O60684 536 aa22.36■■□□□ 1.17
SHKBP1-214ENST00000597396 CABYRO75952 493 aa22.36■■□□□ 1.17
SHKBP1-214ENST00000597396 USP11P51784 963 aa22.36■■□□□ 1.17
SHKBP1-214ENST00000597396 SLC39A5Q6ZMH5 540 aa22.36■■□□□ 1.17
SHKBP1-214ENST00000597396 DIS3L2Q8IYB7 885 aaKnown RBP22.36■■□□□ 1.17
SHKBP1-214ENST00000597396 PPTC7Q8NI37 304 aa22.36■■□□□ 1.17
SHKBP1-214ENST00000597396 ELP1O95163 1332 aa22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 FAM86B1E9PN63 330 aa22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 K7ELQ4 463 aaPredicted RBP22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 NOP56O00567 594 aaKnown RBP22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 ATP9AO75110 1047 aa22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 FAM86B2P0C5J1 330 aa22.35■■□□□ 1.17
SHKBP1-214ENST00000597396 ARP10275 920 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms