RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 LMAN2LQ9H0V9 348 aa10.24□□□□□ -0.77
SMAD4-215ENST00000592911 TTC41PQ6P2S7 1318 aa10.24□□□□□ -0.77
SMAD4-215ENST00000592911 FAM186AA6NE01 2351 aa10.24□□□□□ -0.77
SMAD4-215ENST00000592911 RIF1Q5UIP0 2472 aaKnown RBP10.23□□□□□ -0.77
SMAD4-215ENST00000592911 LCHNA4D1U4 455 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 H3BNC9 293 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 NFIBO00712 420 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 ST18O60284 1047 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 NBNO60934 754 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 LGR5O75473 907 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 F2P00734 622 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 RB1P06400 928 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 MMP3P08254 477 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 RPS6P62753 249 aaKnown RBP10.23□□□□□ -0.77
SMAD4-215ENST00000592911 DEFB103AP81534 67 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 HERC4Q5GLZ8 1057 aaPredicted RBP10.23□□□□□ -0.77
SMAD4-215ENST00000592911 GPATCH4Q5T3I0 446 aaKnown RBP10.23□□□□□ -0.77
SMAD4-215ENST00000592911 KCNV1Q6PIU1 500 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 SAMD3Q8N6K7 520 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 BANK1Q8NDB2 785 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 PPTC7Q8NI37 304 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 CLEC4DQ8WXI8 215 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 FBXL18Q96ME1 805 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 TTC14Q96N46 770 aa10.23□□□□□ -0.77
SMAD4-215ENST00000592911 NSUN3Q9H649 340 aaKnown RBP10.23□□□□□ -0.77
SMAD4-215ENST00000592911 TRIOO75962 3097 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 C5orf67F2Z3F1 127 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 HAS3O00219 553 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 CHGBP05060 677 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 IL9P15248 144 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 PTPN5P54829 565 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 LAMC2Q13753 1193 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 ALX1Q15699 326 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 SMAD2Q15796 467 aaKnown RBP10.22□□□□□ -0.77
SMAD4-215ENST00000592911 CCDC96Q2M329 555 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 TMEM63BQ5T3F8 832 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 GDF6Q6KF10 455 aaPredicted RBP10.22□□□□□ -0.77
SMAD4-215ENST00000592911 MCF2L2Q86YR7 1114 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 C7orf31Q8N865 590 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 PANK1Q8TE04 598 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 NSUN6Q8TEA1 469 aaKnown RBP10.22□□□□□ -0.77
SMAD4-215ENST00000592911 DHX38Q92620 1227 aaKnown RBP10.22□□□□□ -0.77
SMAD4-215ENST00000592911 KAT2BQ92831 832 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 APBB2Q92870 758 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 IL17RBQ9NRM6 502 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 MAP3K20Q9NYL2 800 aaKnown RBP10.22□□□□□ -0.77
SMAD4-215ENST00000592911 ZMYM6O95789 1325 aa10.22□□□□□ -0.77
SMAD4-215ENST00000592911 ATG2AQ2TAZ0 1938 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 TTC3P53804 2025 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 FSD2A1L4K1 749 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 PPFIA4O75335 1185 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 SNHG28P0DPA3 235 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 PTGS1P23219 599 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 ARHGAP1Q07960 439 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 DSG2Q14126 1118 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 MFSD10Q14728 455 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 STXBP2Q15833 593 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 CTC1Q2NKJ3 1217 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 TRIM71Q2Q1W2 868 aaKnown RBP10.21□□□□□ -0.77
SMAD4-215ENST00000592911 EPC2Q52LR7 807 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 ZMYM1Q5SVZ6 1142 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 SLC30A10Q6XR72 485 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 AFG1LQ8WV93 481 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 TOP1MTQ969P6 601 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 UIMC1Q96RL1 719 aa10.21□□□□□ -0.77
SMAD4-215ENST00000592911 M0R2C6 588 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 EIF3JO75822 258 aaKnown RBP10.2□□□□□ -0.78
SMAD4-215ENST00000592911 ABCB11O95342 1321 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 TGFB3P10600 412 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 PDHBP11177 359 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 CALML3P27482 149 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 HOXC8P31273 242 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 PSEN2P49810 448 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 GHRHRQ02643 423 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 ZNF543Q08ER8 600 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 PLEKHG4Q58EX7 1191 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 CCDC178Q5BJE1 867 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 TRAF7Q6Q0C0 670 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 SERINC5Q86VE9 423 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 FBXO11Q86XK2 927 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 STK11IPQ8N1F8 1099 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 SEPT8Q92599 483 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 PPP2R3CQ969Q6 453 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 C11orf84Q9BUA3 381 aaPredicted RBP10.2□□□□□ -0.78
SMAD4-215ENST00000592911 USP34Q70CQ2 3546 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 SPTBN4Q9H254 2564 aa10.2□□□□□ -0.78
SMAD4-215ENST00000592911 RANBP6O60518 1105 aaKnown RBP10.19□□□□□ -0.78
SMAD4-215ENST00000592911 ARIH2O95376 493 aa10.19□□□□□ -0.78
SMAD4-215ENST00000592911 RPLP2P05387 115 aaKnown RBP10.19□□□□□ -0.78
SMAD4-215ENST00000592911 FOXK1P85037 733 aa10.19□□□□□ -0.78
SMAD4-215ENST00000592911 SMAD4Q13485 552 aaKnown RBP10.19□□□□□ -0.78
SMAD4-215ENST00000592911 KIAA0753Q2KHM9 967 aa10.19□□□□□ -0.78
SMAD4-215ENST00000592911 NAALADL2Q58DX5 795 aa10.19□□□□□ -0.78
SMAD4-215ENST00000592911 SPRED2Q7Z698 418 aa10.19□□□□□ -0.78
SMAD4-215ENST00000592911 TMEM192Q8IY95 271 aa10.19□□□□□ -0.78
SMAD4-215ENST00000592911 EDAQ92838 391 aa10.19□□□□□ -0.78
SMAD4-215ENST00000592911 DDX27Q96GQ7 796 aaKnown RBP10.19□□□□□ -0.78
SMAD4-215ENST00000592911 PURBQ96QR8 312 aaKnown RBP10.19□□□□□ -0.78
SMAD4-215ENST00000592911 YME1L1Q96TA2 773 aa10.19□□□□□ -0.78
SMAD4-215ENST00000592911 TMEM47Q9BQJ4 181 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms