RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 ZSCAN22P10073 491 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-213ENST00000554776 CNKSR3Q6P9H4 555 aa4.59□□□□□ -1.67
SCFD1-213ENST00000554776 KCNT2Q6UVM3 1135 aa4.59□□□□□ -1.67
SCFD1-213ENST00000554776 TMEM151BQ8IW70 566 aa4.59□□□□□ -1.67
SCFD1-213ENST00000554776 CHAMP1Q96JM3 812 aa4.59□□□□□ -1.67
SCFD1-213ENST00000554776 TMEM260Q9NX78 707 aa4.59□□□□□ -1.67
SCFD1-213ENST00000554776 CLDND1Q9NY35 253 aa4.59□□□□□ -1.67
SCFD1-213ENST00000554776 COA3Q9Y2R0 106 aaPredicted RBP4.59□□□□□ -1.67
SCFD1-213ENST00000554776 MC3RP41968 323 aa4.58□□□□□ -1.68
SCFD1-213ENST00000554776 GPR85P60893 370 aa4.58□□□□□ -1.68
SCFD1-213ENST00000554776 FOXO4P98177 505 aa4.58□□□□□ -1.68
SCFD1-213ENST00000554776 CAP1Q01518 475 aa4.58□□□□□ -1.68
SCFD1-213ENST00000554776 TRIM61Q5EBN2 209 aa4.58□□□□□ -1.68
SCFD1-213ENST00000554776 EMC4Q5J8M3 183 aa4.58□□□□□ -1.68
SCFD1-213ENST00000554776 SDE2Q6IQ49 451 aa4.58□□□□□ -1.68
SCFD1-213ENST00000554776 LBX2Q6XYB7 198 aa4.58□□□□□ -1.68
SCFD1-213ENST00000554776 B3GNT8Q7Z7M8 397 aa4.58□□□□□ -1.68
SCFD1-213ENST00000554776 MIB1Q86YT6 1006 aa4.58□□□□□ -1.68
SCFD1-213ENST00000554776 EPB41L1Q9H4G0 881 aa4.58□□□□□ -1.68
SCFD1-213ENST00000554776 PALD1Q9ULE6 856 aa4.58□□□□□ -1.68
SCFD1-213ENST00000554776 ZNF652Q9Y2D9 606 aa4.58□□□□□ -1.68
SCFD1-213ENST00000554776 CCDC163A0A0D9SF12 145 aa4.57□□□□□ -1.68
SCFD1-213ENST00000554776 ESYT3A0FGR9 886 aa4.57□□□□□ -1.68
SCFD1-213ENST00000554776 TADA3O75528 432 aa4.57□□□□□ -1.68
SCFD1-213ENST00000554776 LIMS1P48059 325 aa4.57□□□□□ -1.68
SCFD1-213ENST00000554776 AFF3P51826 1226 aaKnown RBP4.57□□□□□ -1.68
SCFD1-213ENST00000554776 GABREP78334 506 aa4.57□□□□□ -1.68
SCFD1-213ENST00000554776 HTRA3P83110 453 aa4.57□□□□□ -1.68
SCFD1-213ENST00000554776 CACNB2Q08289 660 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-213ENST00000554776 CHRNA2Q15822 529 aa4.57□□□□□ -1.68
SCFD1-213ENST00000554776 KIZQ2M2Z5 673 aa4.57□□□□□ -1.68
SCFD1-213ENST00000554776 TCERG1LQ5VWI1 586 aa4.57□□□□□ -1.68
SCFD1-213ENST00000554776 MAMDC2Q7Z304 686 aaPredicted RBP4.57□□□□□ -1.68
SCFD1-213ENST00000554776 IFNL3Q8IZI9 196 aa4.57□□□□□ -1.68
SCFD1-213ENST00000554776 GSTCDQ8NEC7 633 aa4.57□□□□□ -1.68
SCFD1-213ENST00000554776 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.57□□□□□ -1.68
SCFD1-213ENST00000554776 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.57□□□□□ -1.68
SCFD1-213ENST00000554776 PTPRN2Q92932 1015 aa4.57□□□□□ -1.68
SCFD1-213ENST00000554776 PWWP2AQ96N64 755 aa4.57□□□□□ -1.68
SCFD1-213ENST00000554776 IPO9Q96P70 1041 aaKnown RBP4.57□□□□□ -1.68
SCFD1-213ENST00000554776 NCOA5Q9HCD5 579 aaKnown RBP4.57□□□□□ -1.68
SCFD1-213ENST00000554776 PPARGC1AQ9UBK2 798 aaKnown RBP4.57□□□□□ -1.68
SCFD1-213ENST00000554776 FAN1Q9Y2M0 1017 aa4.57□□□□□ -1.68
SCFD1-213ENST00000554776 TRAF6Q9Y4K3 522 aa4.57□□□□□ -1.68
SCFD1-213ENST00000554776 HGSO14964 777 aaPredicted RBP4.56□□□□□ -1.68
SCFD1-213ENST00000554776 KCNQ2O43526 872 aa4.56□□□□□ -1.68
SCFD1-213ENST00000554776 DGKIO75912 1065 aa4.56□□□□□ -1.68
SCFD1-213ENST00000554776 PLA2G1BP04054 148 aaKnown RBP4.56□□□□□ -1.68
SCFD1-213ENST00000554776 GRK2P25098 689 aa4.56□□□□□ -1.68
SCFD1-213ENST00000554776 GRK3P35626 688 aa4.56□□□□□ -1.68
SCFD1-213ENST00000554776 STEAP3Q658P3 488 aa4.56□□□□□ -1.68
SCFD1-213ENST00000554776 ETV3LQ6ZN32 361 aa4.56□□□□□ -1.68
SCFD1-213ENST00000554776 MILR1Q7Z6M3 343 aa4.56□□□□□ -1.68
SCFD1-213ENST00000554776 FAM126BQ8IXS8 530 aa4.56□□□□□ -1.68
SCFD1-213ENST00000554776 SMARCC2Q8TAQ2 1214 aa4.56□□□□□ -1.68
SCFD1-213ENST00000554776 SLC7A14Q8TBB6 771 aa4.56□□□□□ -1.68
SCFD1-213ENST00000554776 MRPL4Q9BYD3 311 aaKnown RBP4.56□□□□□ -1.68
SCFD1-213ENST00000554776 SLC52A2Q9HAB3 445 aa4.56□□□□□ -1.68
SCFD1-213ENST00000554776 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.56□□□□□ -1.68
SCFD1-213ENST00000554776 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.55□□□□□ -1.68
SCFD1-213ENST00000554776 AQP7O14520 342 aa4.55□□□□□ -1.68
SCFD1-213ENST00000554776 C8BP07358 591 aa4.55□□□□□ -1.68
SCFD1-213ENST00000554776 VWA3BQ502W6 1294 aa4.55□□□□□ -1.68
SCFD1-213ENST00000554776 FBLN7Q53RD9 439 aa4.55□□□□□ -1.68
SCFD1-213ENST00000554776 CYP4F22Q6NT55 531 aa4.55□□□□□ -1.68
SCFD1-213ENST00000554776 PHOSPHO1Q8TCT1 267 aa4.55□□□□□ -1.68
SCFD1-213ENST00000554776 FNIP1Q8TF40 1166 aa4.55□□□□□ -1.68
SCFD1-213ENST00000554776 JAM3Q9BX67 310 aa4.55□□□□□ -1.68
SCFD1-213ENST00000554776 SMOC1Q9H4F8 434 aa4.55□□□□□ -1.68
SCFD1-213ENST00000554776 SLC6A20Q9NP91 592 aa4.55□□□□□ -1.68
SCFD1-213ENST00000554776 NDOR1Q9UHB4 597 aa4.55□□□□□ -1.68
SCFD1-213ENST00000554776 PCDHB4Q9Y5E5 795 aa4.55□□□□□ -1.68
SCFD1-213ENST00000554776 PMF1-BGLAPU3KQ54 211 aa4.55□□□□□ -1.68
SCFD1-213ENST00000554776 SBNO2Q9Y2G9 1366 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 TCRBV5S2A0A599 114 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 ANKRD62A6NC57 917 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 ARVCFO00192 962 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 ENPP3O14638 875 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 FFAR3O14843 346 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 WNT9AO14904 365 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 PLD2O14939 933 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 PPP1R12AO14974 1030 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-213ENST00000554776 MAFKO60675 156 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 EFCAB14O75071 495 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 RAPGEF3O95398 923 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 SOD2P04179 222 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 CYP2C8P10632 490 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 DLX2Q07687 328 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-213ENST00000554776 HABP4Q5JVS0 413 aaKnown RBP4.54□□□□□ -1.68
SCFD1-213ENST00000554776 EGFLAMQ63HQ2 1017 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 OTOP3Q7RTS5 596 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 SAPCD2Q86UD0 394 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 LINC00482Q8N8I6 264 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 LINC01356Q8N9X3 169 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 TP53I13Q8NBR0 393 aaPredicted RBP4.54□□□□□ -1.68
SCFD1-213ENST00000554776 ARRDC4Q8NCT1 418 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 PIP4K2CQ8TBX8 421 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 SCLYQ96I15 445 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 NOX5Q96PH1 765 aa4.54□□□□□ -1.68
SCFD1-213ENST00000554776 ALG1Q9BT22 464 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms