RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 GNAI3P08754 354 aa16.1■□□□□ 0.17
SNRPF-203ENST00000551316 ARHGAP1Q07960 439 aa16.1■□□□□ 0.17
SNRPF-203ENST00000551316 CLP1Q92989 425 aaKnown RBP16.1■□□□□ 0.17
SNRPF-203ENST00000551316 CEP95Q96GE4 821 aa16.1■□□□□ 0.17
SNRPF-203ENST00000551316 APOL5Q9BWW9 433 aa16.1■□□□□ 0.17
SNRPF-203ENST00000551316 PLAGL2Q9UPG8 496 aa16.1■□□□□ 0.17
SNRPF-203ENST00000551316 HDAC5Q9UQL6 1122 aa16.1■□□□□ 0.17
SNRPF-203ENST00000551316 TTC3P53804 2025 aa16.09■□□□□ 0.17
SNRPF-203ENST00000551316 LMNAP02545 664 aaKnown RBP16.09■□□□□ 0.17
SNRPF-203ENST00000551316 ITGB1P05556 798 aa16.09■□□□□ 0.17
SNRPF-203ENST00000551316 RB1P06400 928 aa16.09■□□□□ 0.17
SNRPF-203ENST00000551316 TXNP10599 105 aaKnown RBP16.09■□□□□ 0.17
SNRPF-203ENST00000551316 BMP3P12645 472 aa16.09■□□□□ 0.17
SNRPF-203ENST00000551316 ATF7P17544 494 aaPredicted RBP16.09■□□□□ 0.17
SNRPF-203ENST00000551316 OS9Q13438 667 aaPredicted RBP16.09■□□□□ 0.17
SNRPF-203ENST00000551316 KCNG4Q8TDN1 519 aa16.09■□□□□ 0.17
SNRPF-203ENST00000551316 ATP8A2Q9NTI2 1148 aa16.09■□□□□ 0.17
SNRPF-203ENST00000551316 CEP295Q9C0D2 2601 aa16.09■□□□□ 0.17
SNRPF-203ENST00000551316 WDFY3Q8IZQ1 3526 aa16.08■□□□□ 0.16
SNRPF-203ENST00000551316 ASGR2P07307 311 aa16.08■□□□□ 0.16
SNRPF-203ENST00000551316 CTSHP09668 335 aa16.08■□□□□ 0.16
SNRPF-203ENST00000551316 EDNRBP24530 442 aa16.08■□□□□ 0.16
SNRPF-203ENST00000551316 PSEN2P49810 448 aa16.08■□□□□ 0.16
SNRPF-203ENST00000551316 STAT2P52630 851 aa16.08■□□□□ 0.16
SNRPF-203ENST00000551316 PDE4BQ07343 736 aa16.08■□□□□ 0.16
SNRPF-203ENST00000551316 TKFCQ3LXA3 575 aa16.08■□□□□ 0.16
SNRPF-203ENST00000551316 BRDTQ58F21 947 aaPredicted RBP16.08■□□□□ 0.16
SNRPF-203ENST00000551316 SLFN13Q68D06 897 aa16.08■□□□□ 0.16
SNRPF-203ENST00000551316 CCDC105Q8IYK2 499 aa16.08■□□□□ 0.16
SNRPF-203ENST00000551316 GMCL1P1Q8NEA9 526 aa16.08■□□□□ 0.16
SNRPF-203ENST00000551316 IL17RAQ96F46 866 aa16.08■□□□□ 0.16
SNRPF-203ENST00000551316 ISY1Q9ULR0 285 aaKnown RBP16.08■□□□□ 0.16
SNRPF-203ENST00000551316 DOCK5Q9H7D0 1870 aa16.08■□□□□ 0.16
SNRPF-203ENST00000551316 RSPH10B2B2RC85 870 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 HAS3O00219 553 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 PER2O15055 1255 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 NKRFO15226 690 aaKnown RBP eCLIP16.07■□□□□ 0.16
SNRPF-203ENST00000551316 RSPH10BP0C881 870 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 NPR3P17342 541 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 THPOP40225 353 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 C1QBPQ07021 282 aaKnown RBP16.07■□□□□ 0.16
SNRPF-203ENST00000551316 MTMR3Q13615 1198 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 ACAP1Q15027 740 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 CCDC62Q6P9F0 684 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 CHST3Q7LGC8 479 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 CYP2W1Q8TAV3 490 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 SPPL3Q8TCT6 385 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 SCFD2Q8WU76 684 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 API5Q9BZZ5 524 aaKnown RBP16.07■□□□□ 0.16
SNRPF-203ENST00000551316 CCPG1Q9ULG6 757 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 SORCS3Q9UPU3 1222 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 EMSYQ7Z589 1322 aa16.07■□□□□ 0.16
SNRPF-203ENST00000551316 C2CD4DB7Z1M9 353 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 GOLIM4O00461 696 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 PRDM1O75626 825 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 BCAR3O75815 825 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 GNAI2P04899 355 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 MFSD10Q14728 455 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 LY6KQ17RY6 165 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 TMED8Q6PL24 325 aaPredicted RBP16.06■□□□□ 0.16
SNRPF-203ENST00000551316 KCTD1Q719H9 257 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 C7orf31Q8N865 590 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 FLCNQ8NFG4 579 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 ATP8B4Q8TF62 1192 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 MKL1Q969V6 931 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 S1PR5Q9H228 398 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 PRR12Q9ULL5 1215 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 MRPL42Q9Y6G3 142 aaKnown RBP16.06■□□□□ 0.16
SNRPF-203ENST00000551316 LOXHD1Q8IVV2 1947 aa16.06■□□□□ 0.16
SNRPF-203ENST00000551316 SURF6O75683 361 aaKnown RBP16.05■□□□□ 0.16
SNRPF-203ENST00000551316 F2P00734 622 aa16.05■□□□□ 0.16
SNRPF-203ENST00000551316 CALML3P27482 149 aa16.05■□□□□ 0.16
SNRPF-203ENST00000551316 KIAA0753Q2KHM9 967 aa16.05■□□□□ 0.16
SNRPF-203ENST00000551316 SERINC5Q86VE9 423 aa16.05■□□□□ 0.16
SNRPF-203ENST00000551316 RPAP2Q8IXW5 612 aaPredicted RBP16.05■□□□□ 0.16
SNRPF-203ENST00000551316 SSH3Q8TE77 659 aa16.05■□□□□ 0.16
SNRPF-203ENST00000551316 C1orf115Q9H7X2 142 aa16.05■□□□□ 0.16
SNRPF-203ENST00000551316 TSHZ2Q9NRE2 1034 aa16.05■□□□□ 0.16
SNRPF-203ENST00000551316 MTMR4Q9NYA4 1195 aa16.05■□□□□ 0.16
SNRPF-203ENST00000551316 PTPDC1A2A3K4 754 aa16.04■□□□□ 0.16
SNRPF-203ENST00000551316 ADD2P35612 726 aa16.04■□□□□ 0.16
SNRPF-203ENST00000551316 CLCN5P51795 746 aa16.04■□□□□ 0.16
SNRPF-203ENST00000551316 ATXN1P54253 815 aaKnown RBP16.04■□□□□ 0.16
SNRPF-203ENST00000551316 PDE4DQ08499 809 aa16.04■□□□□ 0.16
SNRPF-203ENST00000551316 IKQ13123 557 aaPredicted RBP16.04■□□□□ 0.16
SNRPF-203ENST00000551316 SYCE2Q6PIF2 218 aa16.04■□□□□ 0.16
SNRPF-203ENST00000551316 STAG1Q8WVM7 1258 aa16.04■□□□□ 0.16
SNRPF-203ENST00000551316 POF1BQ8WVV4 589 aa16.04■□□□□ 0.16
SNRPF-203ENST00000551316 CLEC4DQ8WXI8 215 aa16.04■□□□□ 0.16
SNRPF-203ENST00000551316 SEPT8Q92599 483 aa16.04■□□□□ 0.16
SNRPF-203ENST00000551316 ZNF689Q96CS4 500 aaPredicted RBP16.04■□□□□ 0.16
SNRPF-203ENST00000551316 DNAJC2Q99543 621 aaKnown RBP16.04■□□□□ 0.16
SNRPF-203ENST00000551316 HINFPQ9BQA5 517 aa16.04■□□□□ 0.16
SNRPF-203ENST00000551316 ADD3Q9UEY8 706 aaKnown RBP16.04■□□□□ 0.16
SNRPF-203ENST00000551316 NBEAQ8NFP9 2946 aa16.04■□□□□ 0.16
SNRPF-203ENST00000551316 FNDC1Q4ZHG4 1894 aaPredicted RBP16.03■□□□□ 0.16
SNRPF-203ENST00000551316 AOC1P19801 751 aa16.03■□□□□ 0.16
SNRPF-203ENST00000551316 UBALD2Q8IYN6 164 aa16.03■□□□□ 0.16
SNRPF-203ENST00000551316 DTWD2Q8NBA8 298 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms