RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 E7EWF7 191 aa11.97□□□□□ -0.49
ERBB2-204ENST00000541774 PGRMC1O00264 195 aaKnown RBP11.97□□□□□ -0.49
ERBB2-204ENST00000541774 THAP12O43422 761 aa11.97□□□□□ -0.49
ERBB2-204ENST00000541774 SPOPO43791 374 aa11.97□□□□□ -0.49
ERBB2-204ENST00000541774 KDM1AO60341 852 aa11.97□□□□□ -0.49
ERBB2-204ENST00000541774 DCTN3O75935 186 aa11.97□□□□□ -0.49
ERBB2-204ENST00000541774 GJA8P48165 433 aa11.97□□□□□ -0.49
ERBB2-204ENST00000541774 AARSP49588 968 aaKnown RBP eCLIP11.97□□□□□ -0.49
ERBB2-204ENST00000541774 TIMM10P62072 90 aa11.97□□□□□ -0.49
ERBB2-204ENST00000541774 KRT31Q15323 416 aa11.97□□□□□ -0.49
ERBB2-204ENST00000541774 NDEL1Q9GZM8 345 aa11.97□□□□□ -0.49
ERBB2-204ENST00000541774 TRIM10Q9UDY6 481 aa11.97□□□□□ -0.49
ERBB2-204ENST00000541774 TBK1Q9UHD2 729 aa11.97□□□□□ -0.49
ERBB2-204ENST00000541774 MAGEA13PA6NCF6 341 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 GJC1P36383 396 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 ERFP50548 548 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 CDR2Q01850 454 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 STRN3Q13033 797 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 NECTIN1Q15223 517 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 GSDMAQ96QA5 445 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 TUBGCP2Q9BSJ2 902 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 FBXL5Q9UKA1 691 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 USP15Q9Y4E8 981 aaPredicted RBP11.96□□□□□ -0.49
ERBB2-204ENST00000541774 PCDHA13Q9Y5I0 950 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 OPLAHO14841 1288 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 SYF2O95926 243 aaKnown RBP11.96□□□□□ -0.49
ERBB2-204ENST00000541774 RFC5P40937 340 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 ACCSLQ4AC99 568 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 TCP11X2Q5H9J9 407 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 YTHDF3Q7Z739 585 aaKnown RBP11.96□□□□□ -0.49
ERBB2-204ENST00000541774 USP44Q9H0E7 712 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 GALNT8Q9NY28 637 aa11.96□□□□□ -0.49
ERBB2-204ENST00000541774 ANGEL1Q9UNK9 670 aaKnown RBP11.96□□□□□ -0.49
ERBB2-204ENST00000541774 ARHGEF40Q8TER5 1519 aa11.96□□□□□ -0.5
ERBB2-204ENST00000541774 FAM170AA1A519 330 aa11.96□□□□□ -0.5
ERBB2-204ENST00000541774 I3L4J1 428 aa11.96□□□□□ -0.5
ERBB2-204ENST00000541774 RTN3O95197 1032 aaPredicted RBP11.96□□□□□ -0.5
ERBB2-204ENST00000541774 CDC25AP30304 524 aa11.96□□□□□ -0.5
ERBB2-204ENST00000541774 ADD1P35611 737 aaKnown RBP11.96□□□□□ -0.5
ERBB2-204ENST00000541774 ELF3P78545 371 aaPredicted RBP11.96□□□□□ -0.5
ERBB2-204ENST00000541774 ZBED6P86452 979 aa11.96□□□□□ -0.5
ERBB2-204ENST00000541774 CETN1Q12798 172 aa11.96□□□□□ -0.5
ERBB2-204ENST00000541774 UBL4BQ8N7F7 174 aa11.96□□□□□ -0.5
ERBB2-204ENST00000541774 LZICQ8WZA0 190 aa11.96□□□□□ -0.5
ERBB2-204ENST00000541774 UNC45AQ9H3U1 944 aa11.96□□□□□ -0.5
ERBB2-204ENST00000541774 ARL2BPQ9Y2Y0 163 aa11.96□□□□□ -0.5
ERBB2-204ENST00000541774 CARMIL3Q8ND23 1372 aa11.96□□□□□ -0.5
ERBB2-204ENST00000541774 SPAG7O75391 227 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 LGR5O75473 907 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 EIF4A3P38919 411 aaKnown RBP11.95□□□□□ -0.5
ERBB2-204ENST00000541774 PPP1R2P41236 205 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 CARSP49589 748 aaKnown RBP11.95□□□□□ -0.5
ERBB2-204ENST00000541774 IKQ13123 557 aaPredicted RBP11.95□□□□□ -0.5
ERBB2-204ENST00000541774 RFX8Q6ZV50 586 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 SSH3Q8TE77 659 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 KDM4CQ9H3R0 1056 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 LRP2BPQ9P2M1 347 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 PCDH11XQ9BZA7 1347 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 PCDH11YQ9BZA8 1340 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 RNF113AO15541 343 aaKnown RBP11.95□□□□□ -0.5
ERBB2-204ENST00000541774 TFRCP02786 760 aaKnown RBP11.95□□□□□ -0.5
ERBB2-204ENST00000541774 CHN1P15882 459 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 CLUL1Q15846 466 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 NOSTRINQ8IVI9 506 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 ANKRD35Q8N283 1001 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 MYL10Q9BUA6 226 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 MLXIPQ9HAP2 919 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 ZC4H2Q9NQZ6 224 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 JAG2Q9Y219 1238 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 NIP7Q9Y221 180 aaKnown RBP eCLIP11.95□□□□□ -0.54e-6■□□□□ 10.9
ERBB2-204ENST00000541774 ARHGEF10O15013 1369 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 BTBD18B2RXH4 712 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 NCK2O43639 380 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 DMPKQ09013 629 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 PRR16Q569H4 304 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 TMTC2Q8N394 836 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 AGAP11Q8TF27 550 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 SPATA17Q96L03 361 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 CHP1Q99653 195 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 PRMT1Q99873 361 aaKnown RBP11.95□□□□□ -0.5
ERBB2-204ENST00000541774 TUBB6Q9BUF5 446 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 E2F6O75461 281 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 KRT75O95678 551 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 CACNA2D1P54289 1103 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 KCNV1Q6PIU1 500 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 KIAA2013Q8IYS2 634 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 HIPK4Q8NE63 616 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 RAPGEF5Q92565 580 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 TEKT1Q969V4 418 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 LRRC27Q9C0I9 530 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 AZI2Q9H6S1 392 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 NDE1Q9NXR1 346 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 SLC4A4Q9Y6R1 1079 aa11.95□□□□□ -0.5
ERBB2-204ENST00000541774 MROH2AA6NES4 1674 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 CPS1P31327 1500 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 TCP11X1B4DZS4 312 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 COPS2P61201 443 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 RBM43Q6ZSC3 357 aaKnown RBP11.94□□□□□ -0.5
ERBB2-204ENST00000541774 WDR60Q8WVS4 1066 aa11.94□□□□□ -0.5
ERBB2-204ENST00000541774 SUCLG2Q96I99 432 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms