RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 TMTC1Q8IUR5 882 aa11.32□□□□□ -0.6
LRP6-205ENST00000540527 LTV1Q96GA3 475 aaPredicted RBP11.32□□□□□ -0.6
LRP6-205ENST00000540527 NT5C1BQ96P26 610 aa11.32□□□□□ -0.6
LRP6-205ENST00000540527 ITM2CQ9NQX7 267 aa11.32□□□□□ -0.6
LRP6-205ENST00000540527 ARGLU1Q9NWB6 273 aaPredicted RBP11.32□□□□□ -0.6
LRP6-205ENST00000540527 WBP1LQ9NX94 342 aa11.32□□□□□ -0.6
LRP6-205ENST00000540527 PADI4Q9UM07 663 aa11.32□□□□□ -0.6
LRP6-205ENST00000540527 FSD2A1L4K1 749 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 F5H0A9 414 aaPredicted RBP11.31□□□□□ -0.6
LRP6-205ENST00000540527 TRAF5O00463 557 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 NOP56O00567 594 aaKnown RBP11.31□□□□□ -0.6
LRP6-205ENST00000540527 ADAMTS3O15072 1205 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 TBX18O95935 607 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 ATP2A2P16615 1042 aaKnown RBP11.31□□□□□ -0.6
LRP6-205ENST00000540527 STAT1P42224 750 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 TECP42680 631 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 COPAP53621 1224 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 ADKP55263 362 aaKnown RBP11.31□□□□□ -0.6
LRP6-205ENST00000540527 HECTD3Q5T447 861 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 ZNF449Q6P9G9 518 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 DENND1CQ8IV53 801 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 ESX1Q8N693 406 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 TEX9Q8N6V9 391 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 SMARCC1Q92922 1105 aaPredicted RBP11.31□□□□□ -0.6
LRP6-205ENST00000540527 C1GALT1C1Q96EU7 318 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 TMEM169Q96HH4 297 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 CYP26B1Q9NR63 512 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 FAM86C1Q9NVL1 165 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 CACNA2D2Q9NY47 1150 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 SLC13A4Q9UKG4 626 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 MAFFQ9ULX9 164 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 GPR34Q9UPC5 381 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 PCDHA9Q9Y5H5 950 aa11.31□□□□□ -0.6
LRP6-205ENST00000540527 TRIM64CA6NLI5 447 aa11.3□□□□□ -0.6
LRP6-205ENST00000540527 PDE2AO00408 941 aaPredicted RBP11.3□□□□□ -0.6
LRP6-205ENST00000540527 DKC1O60832 514 aaKnown RBP eCLIP11.3□□□□□ -0.6
LRP6-205ENST00000540527 TARSP26639 723 aaKnown RBP11.3□□□□□ -0.6
LRP6-205ENST00000540527 CLEC16AQ2KHT3 1053 aa11.3□□□□□ -0.6
LRP6-205ENST00000540527 SLC27A3Q5K4L6 730 aa11.3□□□□□ -0.6
LRP6-205ENST00000540527 Q6ZVU0 165 aa11.3□□□□□ -0.6
LRP6-205ENST00000540527 CAMKK1Q8N5S9 505 aa11.3□□□□□ -0.6
LRP6-205ENST00000540527 TMEM41AQ96HV5 264 aa11.3□□□□□ -0.6
LRP6-205ENST00000540527 STK31Q9BXU1 1019 aa11.3□□□□□ -0.6
LRP6-205ENST00000540527 TSPY26PQ9H489 355 aa11.3□□□□□ -0.6
LRP6-205ENST00000540527 BRD7Q9NPI1 651 aa11.3□□□□□ -0.6
LRP6-205ENST00000540527 VPS45Q9NRW7 570 aa11.3□□□□□ -0.6
LRP6-205ENST00000540527 ATP8A2Q9NTI2 1148 aa11.3□□□□□ -0.6
LRP6-205ENST00000540527 ZNF112Q9UJU3 913 aa11.3□□□□□ -0.6
LRP6-205ENST00000540527 TRIM64A6NGJ6 449 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 TRIM64BA6NI03 449 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 TSPY2A6NKD2 308 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 WDR64B1ANS9 1081 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 B3GALT2O43825 422 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 TP53P04637 393 aaPredicted RBP11.29□□□□□ -0.6
LRP6-205ENST00000540527 TSPY3P0CV98 308 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 TSPY8P0CW00 308 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 RARAP10276 462 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 GPR3P46089 330 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 SCAND1P57086 179 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 BPIFB3P59826 476 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 TSPY1Q01534 308 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 KCNC4Q03721 635 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 PDE4BQ07343 736 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 MEA1Q16626 185 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 TTC31Q49AM3 519 aaPredicted RBP11.29□□□□□ -0.6
LRP6-205ENST00000540527 MFSD4BQ5TF39 518 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 ENOSF1Q7L5Y1 443 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 KRT25Q7Z3Z0 450 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 PDZD3Q86UT5 571 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 TRIM59Q8IWR1 403 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 IGSF22Q8N9C0 903 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 JADE3Q92613 823 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 FGD4Q96M96 766 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 SLC6A18Q96N87 628 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 ASB2Q96Q27 587 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 B3GNT5Q9BYG0 378 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 GBP3Q9H0R5 595 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 PRDM6Q9NQX0 595 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 GGA3Q9NZ52 723 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 KLHL3Q9UH77 587 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 TRAF6Q9Y4K3 522 aa11.29□□□□□ -0.6
LRP6-205ENST00000540527 MASP2O00187 686 aa11.28□□□□□ -0.6
LRP6-205ENST00000540527 NCK2O43639 380 aa11.28□□□□□ -0.6
LRP6-205ENST00000540527 PSAPP07602 524 aa11.28□□□□□ -0.6
LRP6-205ENST00000540527 VEGFAP15692 232 aaPredicted RBP11.28□□□□□ -0.6
LRP6-205ENST00000540527 POLR2BP30876 1174 aaKnown RBP11.28□□□□□ -0.6
LRP6-205ENST00000540527 DCAF7P61962 342 aa11.28□□□□□ -0.6
LRP6-205ENST00000540527 PCDH1Q08174 1060 aa11.28□□□□□ -0.6
LRP6-205ENST00000540527 ARSJQ5FYB0 599 aaPredicted RBP11.28□□□□□ -0.6
LRP6-205ENST00000540527 C6orf118Q5T5N4 469 aa11.28□□□□□ -0.6
LRP6-205ENST00000540527 TDRD10Q5VZ19 366 aaKnown RBP11.28□□□□□ -0.6
LRP6-205ENST00000540527 MPRIPQ6WCQ1 1025 aa11.28□□□□□ -0.6
LRP6-205ENST00000540527 NYAP1Q6ZVC0 841 aa11.28□□□□□ -0.6
LRP6-205ENST00000540527 NRSN1Q8IZ57 195 aa11.28□□□□□ -0.6
LRP6-205ENST00000540527 CACNA2D3Q8IZS8 1091 aa11.28□□□□□ -0.6
LRP6-205ENST00000540527 SSH1Q8WYL5 1049 aa11.28□□□□□ -0.6
LRP6-205ENST00000540527 IL21Q9HBE4 155 aa11.28□□□□□ -0.6
LRP6-205ENST00000540527 STARD7Q9NQZ5 370 aa11.28□□□□□ -0.6
LRP6-205ENST00000540527 A6NLC8 198 aa11.27□□□□□ -0.61
LRP6-205ENST00000540527 MGEA5O60502 916 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms