RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 PTPROQ16827 1216 aa16.6■□□□□ 0.25
VARS-228ENST00000495010 TCTN1Q2MV58 587 aa16.6■□□□□ 0.25
VARS-228ENST00000495010 LEXMQ3ZCV2 418 aa16.6■□□□□ 0.25
VARS-228ENST00000495010 GJD3Q8N144 294 aa16.6■□□□□ 0.25
VARS-228ENST00000495010 KHSRPQ92945 711 aaKnown RBP eCLIP16.6■□□□□ 0.25
VARS-228ENST00000495010 SPATA33Q96N06 139 aa16.6■□□□□ 0.25
VARS-228ENST00000495010 AMNQ9BXJ7 453 aa16.6■□□□□ 0.25
VARS-228ENST00000495010 KIAA1217Q5T5P2 1943 aa16.6■□□□□ 0.25
VARS-228ENST00000495010 TRANK1O15050 2925 aa16.59■□□□□ 0.25
VARS-228ENST00000495010 RSPH10B2B2RC85 870 aa16.59■□□□□ 0.25
VARS-228ENST00000495010 RSPH10BP0C881 870 aa16.59■□□□□ 0.25
VARS-228ENST00000495010 TRIM71Q2Q1W2 868 aaKnown RBP16.59■□□□□ 0.25
VARS-228ENST00000495010 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.59■□□□□ 0.252e-6■□□□□ 10.3
VARS-228ENST00000495010 C17orf80Q9BSJ5 609 aa16.59■□□□□ 0.25
VARS-228ENST00000495010 JMJD4Q9H9V9 463 aa16.59■□□□□ 0.25
VARS-228ENST00000495010 C17orf102A2RUQ5 167 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 B4E1Z4 1266 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 GGPS1O95749 300 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 SDSP20132 328 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 PUS10Q3MIT2 529 aaKnown RBP16.58■□□□□ 0.24
VARS-228ENST00000495010 CELF3Q5SZQ8 465 aaKnown RBP16.58■□□□□ 0.24
VARS-228ENST00000495010 MYSM1Q5VVJ2 828 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 PTCRAQ6ISU1 281 aaPredicted RBP16.58■□□□□ 0.24
VARS-228ENST00000495010 TRAF7Q6Q0C0 670 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 FAM178BQ8IXR5 827 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 DBF4BQ8NFT6 615 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 ANKS1AQ92625 1134 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 WNT8BQ93098 351 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 SAMD11Q96NU1 681 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 UBAC1Q9BSL1 405 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 MLXIPQ9HAP2 919 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 CD320Q9NPF0 282 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 MAP3K20Q9NYL2 800 aaKnown RBP16.58■□□□□ 0.24
VARS-228ENST00000495010 SIP14410 1827 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 XIRP2A4UGR9 3374 aa16.58■□□□□ 0.24
VARS-228ENST00000495010 ALADP13716 330 aa16.57■□□□□ 0.24
VARS-228ENST00000495010 HSD17B4P51659 736 aa16.57■□□□□ 0.24
VARS-228ENST00000495010 MBTPS1Q14703 1052 aa16.57■□□□□ 0.24
VARS-228ENST00000495010 IMMTQ16891 758 aaKnown RBP16.57■□□□□ 0.24
VARS-228ENST00000495010 CSPP1Q1MSJ5 1256 aa16.57■□□□□ 0.24
VARS-228ENST00000495010 TIGD5Q53EQ6 642 aa16.57■□□□□ 0.24
VARS-228ENST00000495010 EP400NLQ6ZTU2 488 aa16.57■□□□□ 0.24
VARS-228ENST00000495010 ENAHQ8N8S7 591 aaPredicted RBP16.57■□□□□ 0.24
VARS-228ENST00000495010 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.57■□□□□ 0.24
VARS-228ENST00000495010 ATP6V0A1Q93050 837 aa16.57■□□□□ 0.24
VARS-228ENST00000495010 MRPL38Q96DV4 380 aaKnown RBP16.57■□□□□ 0.24
VARS-228ENST00000495010 UIMC1Q96RL1 719 aa16.57■□□□□ 0.24
VARS-228ENST00000495010 YME1L1Q96TA2 773 aa16.57■□□□□ 0.24
VARS-228ENST00000495010 PDCD2LQ9BRP1 358 aa16.57■□□□□ 0.24
VARS-228ENST00000495010 KRT23Q9C075 422 aa16.57■□□□□ 0.24
VARS-228ENST00000495010 C11orf16Q9NQ32 467 aa16.57■□□□□ 0.24
VARS-228ENST00000495010 DIAPH3Q9NSV4 1193 aa16.57■□□□□ 0.24
VARS-228ENST00000495010 REV3LO60673 3130 aa16.57■□□□□ 0.24
VARS-228ENST00000495010 MYH6P13533 1939 aa16.57■□□□□ 0.24
VARS-228ENST00000495010 PRR33A8MZF0 331 aa16.56■□□□□ 0.24
VARS-228ENST00000495010 HOXD8P13378 290 aaPredicted RBP16.56■□□□□ 0.24
VARS-228ENST00000495010 IL9P15248 144 aa16.56■□□□□ 0.24
VARS-228ENST00000495010 CCND2P30279 289 aa16.56■□□□□ 0.24
VARS-228ENST00000495010 HDAC1Q13547 482 aaPredicted RBP16.56■□□□□ 0.24
VARS-228ENST00000495010 HSDL1Q3SXM5 330 aa16.56■□□□□ 0.24
VARS-228ENST00000495010 IFIT1BQ5T764 474 aaKnown RBP16.56■□□□□ 0.24
VARS-228ENST00000495010 CWC27Q6UX04 472 aaKnown RBP16.56■□□□□ 0.24
VARS-228ENST00000495010 SERINC5Q86VE9 423 aa16.56■□□□□ 0.24
VARS-228ENST00000495010 SEPT8Q92599 483 aa16.56■□□□□ 0.24
VARS-228ENST00000495010 LNPKQ9C0E8 428 aa16.56■□□□□ 0.24
VARS-228ENST00000495010 ZSWIM5Q9P217 1185 aa16.56■□□□□ 0.24
VARS-228ENST00000495010 FAM50BQ9Y247 325 aa16.56■□□□□ 0.24
VARS-228ENST00000495010 PCDHA1Q9Y5I3 950 aa16.56■□□□□ 0.24
VARS-228ENST00000495010 MYH7BA7E2Y1 1941 aa16.56■□□□□ 0.24
VARS-228ENST00000495010 NOP56O00567 594 aaKnown RBP16.55■□□□□ 0.24
VARS-228ENST00000495010 UPP2O95045 317 aa16.55■□□□□ 0.24
VARS-228ENST00000495010 TGFB3P10600 412 aa16.55■□□□□ 0.24
VARS-228ENST00000495010 HOXA13P31271 388 aaPredicted RBP16.55■□□□□ 0.24
VARS-228ENST00000495010 HTRA4P83105 476 aaPredicted RBP16.55■□□□□ 0.24
VARS-228ENST00000495010 TRAF1Q13077 416 aa16.55■□□□□ 0.24
VARS-228ENST00000495010 GPM6BQ13491 265 aa16.55■□□□□ 0.24
VARS-228ENST00000495010 PGM5Q15124 567 aa16.55■□□□□ 0.24
VARS-228ENST00000495010 EPC2Q52LR7 807 aa16.55■□□□□ 0.24
VARS-228ENST00000495010 PLEKHG4Q58EX7 1191 aa16.55■□□□□ 0.24
VARS-228ENST00000495010 STOX1Q6ZVD7 989 aa16.55■□□□□ 0.24
VARS-228ENST00000495010 VSIG10LQ86VR7 867 aa16.55■□□□□ 0.24
VARS-228ENST00000495010 SAMD3Q8N6K7 520 aa16.55■□□□□ 0.24
VARS-228ENST00000495010 SP7Q8TDD2 431 aaPredicted RBP16.55■□□□□ 0.24
VARS-228ENST00000495010 CNNM2Q9H8M5 875 aa16.55■□□□□ 0.24
VARS-228ENST00000495010 GRXCR2A6NFK2 248 aa16.54■□□□□ 0.24
VARS-228ENST00000495010 KLRF2D3W0D1 207 aa16.54■□□□□ 0.24
VARS-228ENST00000495010 H3BRB1 525 aa16.54■□□□□ 0.24
VARS-228ENST00000495010 GCOM1H8Y6P7 765 aaPredicted RBP16.54■□□□□ 0.24
VARS-228ENST00000495010 HIP1O00291 1037 aa16.54■□□□□ 0.24
VARS-228ENST00000495010 ZBTB5O15062 677 aa16.54■□□□□ 0.24
VARS-228ENST00000495010 RGS20O76081 388 aa16.54■□□□□ 0.24
VARS-228ENST00000495010 POLR2MP0CAP2 368 aa16.54■□□□□ 0.24
VARS-228ENST00000495010 GNAT1P11488 350 aa16.54■□□□□ 0.24
VARS-228ENST00000495010 UBA1P22314 1058 aaKnown RBP16.54■□□□□ 0.24
VARS-228ENST00000495010 HIC1Q14526 733 aa16.54■□□□□ 0.24
VARS-228ENST00000495010 STAG2Q8N3U4 1231 aa16.54■□□□□ 0.24
VARS-228ENST00000495010 BANK1Q8NDB2 785 aa16.54■□□□□ 0.24
VARS-228ENST00000495010 C16orf70Q9BSU1 422 aa16.54■□□□□ 0.24
VARS-228ENST00000495010 TUT1Q9H6E5 874 aaKnown RBP16.54■□□□□ 0.24
VARS-228ENST00000495010 H3BNC9 293 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms