RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 M0R2N6 131 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 PPFIA3O75145 1194 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 HOXD8P13378 290 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-212ENST00000489728 UBA1P22314 1058 aaKnown RBP12.64□□□□□ -0.39
CPSF7-212ENST00000489728 SETQ01105 290 aaPredicted RBP12.64□□□□□ -0.39
CPSF7-212ENST00000489728 ARHGAP1Q07960 439 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 MTMR1Q13613 665 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 TRIM29Q14134 588 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 SNX17Q15036 470 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 NPY5RQ15761 445 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 KCNA10Q16322 511 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 CEP55Q53EZ4 464 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 CELF3Q5SZQ8 465 aaKnown RBP12.64□□□□□ -0.39
CPSF7-212ENST00000489728 KRT25Q7Z3Z0 450 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 PPTC7Q8NI37 304 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 TMX3Q96JJ7 454 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 GLT1D1Q96MS3 346 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 AIFM3Q96NN9 605 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 MXRA8Q9BRK3 442 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 TMEM260Q9NX78 707 aa12.64□□□□□ -0.39
CPSF7-212ENST00000489728 MYADML2A6NDP7 307 aa12.63□□□□□ -0.39
CPSF7-212ENST00000489728 MEIS1O00470 390 aa12.63□□□□□ -0.39
CPSF7-212ENST00000489728 TNRC18O15417 2968 aaPredicted RBP12.63□□□□□ -0.39
CPSF7-212ENST00000489728 JAK2O60674 1132 aa12.63□□□□□ -0.39
CPSF7-212ENST00000489728 ASGR1P07306 291 aa12.63□□□□□ -0.39
CPSF7-212ENST00000489728 ITGB5P18084 799 aa12.63□□□□□ -0.39
CPSF7-212ENST00000489728 CIITAP33076 1130 aa12.63□□□□□ -0.39
CPSF7-212ENST00000489728 USP11P51784 963 aa12.63□□□□□ -0.39
CPSF7-212ENST00000489728 LY6KQ17RY6 165 aa12.63□□□□□ -0.39
CPSF7-212ENST00000489728 MYSM1Q5VVJ2 828 aa12.63□□□□□ -0.39
CPSF7-212ENST00000489728 JAKMIP3Q5VZ66 844 aa12.63□□□□□ -0.39
CPSF7-212ENST00000489728 MOXD1Q6UVY6 613 aa12.63□□□□□ -0.39
CPSF7-212ENST00000489728 METTL7BQ6UX53 244 aa12.63□□□□□ -0.39
CPSF7-212ENST00000489728 DHX37Q8IY37 1157 aaKnown RBP12.63□□□□□ -0.39
CPSF7-212ENST00000489728 SENP6Q9GZR1 1112 aaPredicted RBP12.63□□□□□ -0.39
CPSF7-212ENST00000489728 MROH7Q68CQ1 1323 aa12.62□□□□□ -0.39
CPSF7-212ENST00000489728 CD2BP2O95400 341 aaKnown RBP12.62□□□□□ -0.39
CPSF7-212ENST00000489728 GGPS1O95749 300 aa12.62□□□□□ -0.39
CPSF7-212ENST00000489728 MMP1P03956 469 aa12.62□□□□□ -0.39
CPSF7-212ENST00000489728 MYCNP04198 464 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-212ENST00000489728 SEMA3FQ13275 785 aa12.62□□□□□ -0.39
CPSF7-212ENST00000489728 NONOQ15233 471 aaKnown RBP eCLIP12.62□□□□□ -0.39
CPSF7-212ENST00000489728 DGKDQ16760 1214 aa12.62□□□□□ -0.39
CPSF7-212ENST00000489728 NAP1L4Q99733 375 aaKnown RBP12.62□□□□□ -0.39
CPSF7-212ENST00000489728 STARD7Q9NQZ5 370 aa12.62□□□□□ -0.39
CPSF7-212ENST00000489728 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.62□□□□□ -0.39
CPSF7-212ENST00000489728 NR2E3Q9Y5X4 410 aa12.62□□□□□ -0.39
CPSF7-212ENST00000489728 MYH7BA7E2Y1 1941 aa12.62□□□□□ -0.39
CPSF7-212ENST00000489728 NFASCO94856 1347 aa12.62□□□□□ -0.39
CPSF7-212ENST00000489728 IGLV3-22A0A075B6J6 115 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 A0A0U1RQG5 324 aaPredicted RBP12.61□□□□□ -0.39
CPSF7-212ENST00000489728 PPFIA4O75335 1185 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 MMP3P08254 477 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 GCFC2P16383 781 aaKnown RBP12.61□□□□□ -0.39
CPSF7-212ENST00000489728 KCNA2P16389 499 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 KRT2P35908 639 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 ZNF76P36508 570 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 PURAQ00577 322 aaKnown RBP12.61□□□□□ -0.39
CPSF7-212ENST00000489728 BEX3Q00994 111 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 SP2Q02086 613 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 TMEM63BQ5T3F8 832 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 SLC39A5Q6ZMH5 540 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 FAM184AQ8NB25 1140 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 SLC43A3Q8NBI5 491 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 AFG1LQ8WV93 481 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 COPS5Q92905 334 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 PGBD1Q96JS3 809 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 C8orf76Q96K31 380 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 SPATA33Q96N06 139 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 MTG1Q9BT17 334 aaPredicted RBP12.61□□□□□ -0.39
CPSF7-212ENST00000489728 KATNAL1Q9BW62 490 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 MLXIPQ9HAP2 919 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 KCNH7Q9NS40 1196 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 RTEL1Q9NZ71 1219 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 KCNJ14Q9UNX9 436 aa12.61□□□□□ -0.39
CPSF7-212ENST00000489728 ALPK3Q96L96 1907 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 SCN10AQ9Y5Y9 1956 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 CYP3A7-CYP3A51PA0A087WV96 503 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 CCDC194A0A1B0GVG4 234 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 ADAMTS3O15072 1205 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 EVI5O60447 810 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 CYP3A7P24462 503 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 CUL4AQ13619 759 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 SAFBQ15424 915 aaKnown RBP eCLIP12.6□□□□□ -0.39
CPSF7-212ENST00000489728 LRRC26Q2I0M4 334 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 KRT40Q6A162 431 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 CXCL17Q6UXB2 119 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 ANKRD33Q7Z3H0 272 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 FBXO18Q8NFZ0 1043 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 RASGRP4Q8TDF6 673 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 TBCKQ8TEA7 893 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 SNX21Q969T3 373 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 TOX2Q96NM4 488 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 SDF4Q9BRK5 362 aa12.6□□□□□ -0.39
CPSF7-212ENST00000489728 DNAH12Q6ZR08 3092 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 FAM86B1E9PN63 330 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 ARVCFO00192 962 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 NOP56O00567 594 aaKnown RBP12.59□□□□□ -0.39
CPSF7-212ENST00000489728 F2P00734 622 aa12.59□□□□□ -0.39
CPSF7-212ENST00000489728 FAM86B2P0C5J1 330 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms