RNA–Protein interactions for RNA: ENST00000474345.5

FDPS-210, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-210ENST00000474345 ZNF76P36508 570 aa17.29■□□□□ 0.36
FDPS-210ENST00000474345 BEX3Q00994 111 aa17.29■□□□□ 0.36
FDPS-210ENST00000474345 GUCY1B3Q02153 619 aa17.29■□□□□ 0.36
FDPS-210ENST00000474345 ARHGAP1Q07960 439 aa17.29■□□□□ 0.36
FDPS-210ENST00000474345 TRIM29Q14134 588 aa17.29■□□□□ 0.36
FDPS-210ENST00000474345 GNPTABQ3T906 1256 aa17.29■□□□□ 0.36
FDPS-210ENST00000474345 RNF180Q86T96 592 aa17.29■□□□□ 0.36
FDPS-210ENST00000474345 TLK2Q86UE8 772 aa17.29■□□□□ 0.36
FDPS-210ENST00000474345 FBXO18Q8NFZ0 1043 aa17.29■□□□□ 0.36
FDPS-210ENST00000474345 GPRASP2Q96D09 838 aa17.29■□□□□ 0.36
FDPS-210ENST00000474345 TSEN34Q9BSV6 310 aaKnown RBP17.29■□□□□ 0.36
FDPS-210ENST00000474345 SMC3Q9UQE7 1217 aa17.29■□□□□ 0.36
FDPS-210ENST00000474345 K7ELQ4 463 aaPredicted RBP17.28■□□□□ 0.36
FDPS-210ENST00000474345 MAFGO15525 162 aa17.28■□□□□ 0.36
FDPS-210ENST00000474345 FIBPO43427 364 aa17.28■□□□□ 0.36
FDPS-210ENST00000474345 ARP10275 920 aa17.28■□□□□ 0.36
FDPS-210ENST00000474345 COL6A1P12109 1028 aa17.28■□□□□ 0.36
FDPS-210ENST00000474345 CST5P28325 142 aaPredicted RBP17.28■□□□□ 0.36
FDPS-210ENST00000474345 KRT2P35908 639 aa17.28■□□□□ 0.36
FDPS-210ENST00000474345 USP11P51784 963 aa17.28■□□□□ 0.36
FDPS-210ENST00000474345 NR5A1Q13285 461 aa17.28■□□□□ 0.36
FDPS-210ENST00000474345 KCNA10Q16322 511 aa17.28■□□□□ 0.36
FDPS-210ENST00000474345 FSCN1Q16658 493 aaKnown RBP17.28■□□□□ 0.36
FDPS-210ENST00000474345 CEP55Q53EZ4 464 aa17.28■□□□□ 0.36
FDPS-210ENST00000474345 EARS2Q5JPH6 523 aaKnown RBP17.28■□□□□ 0.36
FDPS-210ENST00000474345 KRT25Q7Z3Z0 450 aa17.28■□□□□ 0.36
FDPS-210ENST00000474345 NECAB2Q7Z6G3 386 aa17.28■□□□□ 0.36
FDPS-210ENST00000474345 OR6J1Q8NGC5 347 aa17.28■□□□□ 0.36
FDPS-210ENST00000474345 TBCKQ8TEA7 893 aa17.28■□□□□ 0.36
FDPS-210ENST00000474345 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.28■□□□□ 0.36
FDPS-210ENST00000474345 BRCA2P51587 3418 aa17.28■□□□□ 0.36
FDPS-210ENST00000474345 DOCK5Q9H7D0 1870 aa17.27■□□□□ 0.36
FDPS-210ENST00000474345 CCDC194A0A1B0GVG4 234 aa17.27■□□□□ 0.36
FDPS-210ENST00000474345 FAM86B1E9PN63 330 aa17.27■□□□□ 0.36
FDPS-210ENST00000474345 GH1P01241 217 aa17.27■□□□□ 0.36
FDPS-210ENST00000474345 FAM86B2P0C5J1 330 aa17.27■□□□□ 0.36
FDPS-210ENST00000474345 CIITAP33076 1130 aa17.27■□□□□ 0.36
FDPS-210ENST00000474345 LAMC2Q13753 1193 aa17.27■□□□□ 0.36
FDPS-210ENST00000474345 NONOQ15233 471 aaKnown RBP eCLIP17.27■□□□□ 0.36
FDPS-210ENST00000474345 CELF3Q5SZQ8 465 aaKnown RBP17.27■□□□□ 0.36
FDPS-210ENST00000474345 MYSM1Q5VVJ2 828 aa17.27■□□□□ 0.36
FDPS-210ENST00000474345 DHX37Q8IY37 1157 aaKnown RBP17.27■□□□□ 0.36
FDPS-210ENST00000474345 DIS3L2Q8IYB7 885 aaKnown RBP17.27■□□□□ 0.36
FDPS-210ENST00000474345 PCSK9Q8NBP7 692 aaKnown RBP17.27■□□□□ 0.36
FDPS-210ENST00000474345 TNFRSF25Q93038 417 aa17.27■□□□□ 0.36
FDPS-210ENST00000474345 SENP7Q9BQF6 1050 aa17.27■□□□□ 0.36
FDPS-210ENST00000474345 C11orf49Q9H6J7 331 aa17.27■□□□□ 0.36
FDPS-210ENST00000474345 PHF24Q9UPV7 400 aa17.27■□□□□ 0.36
FDPS-210ENST00000474345 IGLV3-22A0A075B6J6 115 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 A6NJR5 290 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 KBTBD13C9JR72 458 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 SORBS3O60504 671 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 GGPS1O95749 300 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 ASGR1P07306 291 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 UBA1P22314 1058 aaKnown RBP17.26■□□□□ 0.35
FDPS-210ENST00000474345 ACLYP53396 1101 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 MTMR1Q13613 665 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 NEDD9Q14511 834 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 INF2Q27J81 1249 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 PIK3AP1Q6ZUJ8 805 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 NIPA1Q7RTP0 329 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 PLA2G4DQ86XP0 818 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 AFG1LQ8WV93 481 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 FERMT2Q96AC1 680 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 CDHR1Q96JP9 859 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 SENP6Q9GZR1 1112 aaPredicted RBP17.26■□□□□ 0.35
FDPS-210ENST00000474345 BRMS1Q9HCU9 246 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 KCNH7Q9NS40 1196 aa17.26■□□□□ 0.35
FDPS-210ENST00000474345 FAM205CA6NFA0 338 aa17.25■□□□□ 0.35
FDPS-210ENST00000474345 KCNA2P16389 499 aa17.25■□□□□ 0.35
FDPS-210ENST00000474345 SAFBQ15424 915 aaKnown RBP eCLIP17.25■□□□□ 0.35
FDPS-210ENST00000474345 CYFIP1Q7L576 1253 aa17.25■□□□□ 0.35
FDPS-210ENST00000474345 EMID1Q96A84 441 aaPredicted RBP17.25■□□□□ 0.35
FDPS-210ENST00000474345 INTS4Q96HW7 963 aaKnown RBP17.25■□□□□ 0.35
FDPS-210ENST00000474345 MLXIPQ9HAP2 919 aa17.25■□□□□ 0.35
FDPS-210ENST00000474345 CYP3A7-CYP3A51PA0A087WV96 503 aa17.24■□□□□ 0.35
FDPS-210ENST00000474345 MOXD2PA6NHM9 499 aa17.24■□□□□ 0.35
FDPS-210ENST00000474345 ZEB2O60315 1214 aa17.24■□□□□ 0.35
FDPS-210ENST00000474345 CYP3A7P24462 503 aa17.24■□□□□ 0.35
FDPS-210ENST00000474345 CPT1AP50416 773 aa17.24■□□□□ 0.35
FDPS-210ENST00000474345 LARP1BQ659C4 914 aaKnown RBP17.24■□□□□ 0.35
FDPS-210ENST00000474345 HSCBQ8IWL3 235 aa17.24■□□□□ 0.35
FDPS-210ENST00000474345 LENG9Q96B70 501 aa17.24■□□□□ 0.35
FDPS-210ENST00000474345 AGO4Q9HCK5 861 aaKnown RBP17.24■□□□□ 0.35
FDPS-210ENST00000474345 FOXD4L1Q9NU39 408 aa17.24■□□□□ 0.35
FDPS-210ENST00000474345 PKD2L1Q9P0L9 805 aa17.24■□□□□ 0.35
FDPS-210ENST00000474345 KIF3AQ9Y496 699 aa17.24■□□□□ 0.35
FDPS-210ENST00000474345 TELO2Q9Y4R8 837 aa17.24■□□□□ 0.35
FDPS-210ENST00000474345 A0A1W2PQ45 241 aaPredicted RBP17.23■□□□□ 0.35
FDPS-210ENST00000474345 A0A1W2PQY0 241 aa17.23■□□□□ 0.35
FDPS-210ENST00000474345 MMP3P08254 477 aa17.23■□□□□ 0.35
FDPS-210ENST00000474345 MYL3P08590 195 aa17.23■□□□□ 0.35
FDPS-210ENST00000474345 HSDL1Q3SXM5 330 aa17.23■□□□□ 0.35
FDPS-210ENST00000474345 PRR16Q569H4 304 aa17.23■□□□□ 0.35
FDPS-210ENST00000474345 BRDTQ58F21 947 aaPredicted RBP17.23■□□□□ 0.35
FDPS-210ENST00000474345 METTL7BQ6UX53 244 aa17.23■□□□□ 0.35
FDPS-210ENST00000474345 CXCL17Q6UXB2 119 aa17.23■□□□□ 0.35
FDPS-210ENST00000474345 SLC39A5Q6ZMH5 540 aa17.23■□□□□ 0.35
FDPS-210ENST00000474345 GIMAP8Q8ND71 665 aaPredicted RBP17.23■□□□□ 0.35
FDPS-210ENST00000474345 SPATA33Q96N06 139 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms