RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 UBR7Q8N806 425 aa7.02□□□□□ -1.29
HMGB1P26-201ENST00000452520 NETO2Q8NC67 525 aa7.02□□□□□ -1.29
HMGB1P26-201ENST00000452520 CHAC2Q8WUX2 184 aa7.02□□□□□ -1.29
HMGB1P26-201ENST00000452520 SLC6A20Q9NP91 592 aa7.02□□□□□ -1.29
HMGB1P26-201ENST00000452520 M0R2C6 588 aa7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 NKRFO15226 690 aaKnown RBP eCLIP7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 MARCH6O60337 910 aa7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 GLRX3O76003 335 aaKnown RBP7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 MPOP05164 745 aa7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 GLI1P08151 1106 aa7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 GNAT1P11488 350 aa7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 PDE6AP16499 860 aa7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 IGBP1P78318 339 aa7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 KCNMB1Q16558 191 aa7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 TMEM177Q53S58 311 aa7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 ZSWIM9Q86XI8 627 aa7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 ANKLE2Q86XL3 938 aa7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 PIP4K2CQ8TBX8 421 aa7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 INTS4Q96HW7 963 aaKnown RBP7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 ORAI3Q9BRQ5 295 aa7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 SLC6A17Q9H1V8 727 aa7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 SIT1Q9Y3P8 196 aa7.01□□□□□ -1.29
HMGB1P26-201ENST00000452520 TCRBV5S4A2TA0A5A2 114 aa7□□□□□ -1.29
HMGB1P26-201ENST00000452520 ZC3H12DA2A288 527 aaKnown RBP7□□□□□ -1.29
HMGB1P26-201ENST00000452520 F8W031 263 aaPredicted RBP7□□□□□ -1.29
HMGB1P26-201ENST00000452520 TRAF5O00463 557 aa7□□□□□ -1.29
HMGB1P26-201ENST00000452520 KPNA6O60684 536 aa7□□□□□ -1.29
HMGB1P26-201ENST00000452520 PAPLNO95428 1278 aa7□□□□□ -1.29
HMGB1P26-201ENST00000452520 ITGB5P18084 799 aa7□□□□□ -1.29
HMGB1P26-201ENST00000452520 SOX5P35711 763 aa7□□□□□ -1.29
HMGB1P26-201ENST00000452520 SLC6A11P48066 632 aa7□□□□□ -1.29
HMGB1P26-201ENST00000452520 NR1I3Q14994 352 aa7□□□□□ -1.29
HMGB1P26-201ENST00000452520 GPR19Q15760 415 aa7□□□□□ -1.29
HMGB1P26-201ENST00000452520 ADGRF1Q5T601 910 aa7□□□□□ -1.29
HMGB1P26-201ENST00000452520 STEAP3Q658P3 488 aa7□□□□□ -1.29
HMGB1P26-201ENST00000452520 ARHGAP36Q6ZRI8 547 aa7□□□□□ -1.29
HMGB1P26-201ENST00000452520 DDX46Q7L014 1031 aaKnown RBP7□□□□□ -1.29
HMGB1P26-201ENST00000452520 KIF18BQ86Y91 864 aa7□□□□□ -1.29
HMGB1P26-201ENST00000452520 PANK1Q8TE04 598 aa7□□□□□ -1.29
HMGB1P26-201ENST00000452520 LEO1Q8WVC0 666 aaPredicted RBP7□□□□□ -1.29
HMGB1P26-201ENST00000452520 RXFP1Q9HBX9 757 aa7□□□□□ -1.29
HMGB1P26-201ENST00000452520 CBX4O00257 560 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 KRIT1O00522 736 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 HGSO14964 777 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 SGSM2O43147 1006 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 TADA3O75528 432 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 AMY2AP04746 511 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 AMY2BP19961 511 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 PDE6BP35913 854 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 MECP2P51608 486 aaKnown RBP6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 JAM2P57087 298 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 CHRNA2Q15822 529 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 EMC4Q5J8M3 183 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 PKN3Q6P5Z2 889 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 ZCRB1Q8TBF4 217 aaKnown RBP6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 SEC14L1Q92503 715 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 PEX11GQ96HA9 241 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 POLR3GLQ9BT43 218 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 BRINP2Q9C0B6 783 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 COL4A3BPQ9Y5P4 624 aa6.99□□□□□ -1.29
HMGB1P26-201ENST00000452520 OR14I1A6ND48 311 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 NUDT19A8MXV4 375 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 ZNF561-AS1K7EIQ3 104 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 JUNBP17275 347 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 IBSPP21815 317 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 CNGA1P29973 690 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 IRAK1P51617 712 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 YBX1P67809 324 aaKnown RBP6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 PRR5P85299 388 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 AMPD3Q01432 767 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 RAB3GAP1Q15042 981 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 SEPT7Q16181 437 aaKnown RBP6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 CT47A1Q5JQC4 288 aaPredicted RBP6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 RPTNQ6XPR3 784 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 NOL8Q76FK4 1167 aaKnown RBP6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 DCP2Q8IU60 420 aaKnown RBP6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 CISD2Q8N5K1 135 aaKnown RBP6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 AP5M1Q9H0R1 490 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 SMOC1Q9H4F8 434 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 SMURF1Q9HCE7 757 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 PCDH12Q9NPG4 1184 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 KLHL14Q9P2G3 628 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 KLHL42Q9P2K6 505 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 DBR1Q9UK59 544 aaKnown RBP6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 NUDT5Q9UKK9 219 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 DSEQ9UL01 958 aa6.98□□□□□ -1.29
HMGB1P26-201ENST00000452520 ZNF503-AS2A6NEH8 195 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 ZBTB7AO95365 584 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 F2P00734 622 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 KRT15P19012 456 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 POU3F3P20264 500 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 ANAPC15P60006 121 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 ARHGAP44Q17R89 818 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 CARMIL2Q6F5E8 1435 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 CYP4F22Q6NT55 531 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 MILR1Q7Z6M3 343 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 STRA8Q7Z7C7 330 aa6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 PTRH1Q86Y79 214 aaKnown RBP6.97□□□□□ -1.29
HMGB1P26-201ENST00000452520 IRF2BP1Q8IU81 584 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms