RNA–Protein interactions for RNA: ENST00000425971.2

HMGB1P32-201, Transcript of high mobility group box 1 pseudogene 32, humanhuman

BASIC

Gene HMGB1P32, Length 565 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P32-201ENST00000425971 SAMD15Q9P1V8 674 aa8.65□□□□□ -1.02
HMGB1P32-201ENST00000425971 FBXL7Q9UJT9 491 aa8.65□□□□□ -1.02
HMGB1P32-201ENST00000425971 DIP2CQ9Y2E4 1556 aa8.65□□□□□ -1.03
HMGB1P32-201ENST00000425971 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.64□□□□□ -1.03
HMGB1P32-201ENST00000425971 C7orf72A4D263 438 aa8.64□□□□□ -1.03
HMGB1P32-201ENST00000425971 ALG1L2C9J202 215 aa8.64□□□□□ -1.03
HMGB1P32-201ENST00000425971 GLRX3O76003 335 aaKnown RBP8.64□□□□□ -1.03
HMGB1P32-201ENST00000425971 CPEP16870 476 aa8.64□□□□□ -1.03
HMGB1P32-201ENST00000425971 RPL10P27635 214 aaKnown RBP8.64□□□□□ -1.03
HMGB1P32-201ENST00000425971 STRN3Q13033 797 aa8.64□□□□□ -1.03
HMGB1P32-201ENST00000425971 DDX53Q86TM3 631 aaKnown RBP8.64□□□□□ -1.03
HMGB1P32-201ENST00000425971 KIF18BQ86Y91 864 aa8.64□□□□□ -1.03
HMGB1P32-201ENST00000425971 IGSF22Q8N9C0 903 aa8.64□□□□□ -1.03
HMGB1P32-201ENST00000425971 CELF4Q9BZC1 486 aaKnown RBP8.64□□□□□ -1.03
HMGB1P32-201ENST00000425971 CDIP1Q9H305 208 aa8.64□□□□□ -1.03
HMGB1P32-201ENST00000425971 PCDHA2Q9Y5H9 948 aa8.64□□□□□ -1.03
HMGB1P32-201ENST00000425971 CBX4O00257 560 aa8.63□□□□□ -1.03
HMGB1P32-201ENST00000425971 MYO1BO43795 1136 aa8.63□□□□□ -1.03
HMGB1P32-201ENST00000425971 SOD2P04179 222 aa8.63□□□□□ -1.03
HMGB1P32-201ENST00000425971 FERMT3Q86UX7 667 aa8.63□□□□□ -1.03
HMGB1P32-201ENST00000425971 NLRP10Q86W26 655 aa8.63□□□□□ -1.03
HMGB1P32-201ENST00000425971 ZC3H7AQ8IWR0 971 aaKnown RBP8.63□□□□□ -1.03
HMGB1P32-201ENST00000425971 Q8N1Y9 231 aa8.63□□□□□ -1.03
HMGB1P32-201ENST00000425971 ATL2Q8NHH9 583 aa8.63□□□□□ -1.03
HMGB1P32-201ENST00000425971 WNK4Q96J92 1243 aa8.63□□□□□ -1.03
HMGB1P32-201ENST00000425971 IPPKQ9H8X2 491 aa8.63□□□□□ -1.03
HMGB1P32-201ENST00000425971 PPARGC1AQ9UBK2 798 aaKnown RBP8.63□□□□□ -1.03
HMGB1P32-201ENST00000425971 AGLP35573 1532 aa8.63□□□□□ -1.03
HMGB1P32-201ENST00000425971 ADAM23O75077 832 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 BPIP17213 487 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 GRK2P25098 689 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 GRK3P35626 688 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 MECP2P51608 486 aaKnown RBP8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 GTF2A2P52657 109 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 LSAMPQ13449 338 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 SKOR2Q2VWA4 1001 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 BRDTQ58F21 947 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 HLA-DQA1Q5Y7H0 255 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 WFDC3Q8IUB2 231 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 OR2W6PQ8NHA6 318 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 DPF3Q92784 378 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 MAP6Q96JE9 813 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 LMCD1Q9NZU5 365 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 TNFRSF10DQ9UBN6 386 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 COQ6Q9Y2Z9 468 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 TIMM13Q9Y5L4 95 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 STRCP1A6NGW2 1772 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 POLR1AO95602 1720 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 ABCA6Q8N139 1617 aa8.62□□□□□ -1.03
HMGB1P32-201ENST00000425971 REREQ9P2R6 1566 aa8.61□□□□□ -1.03
HMGB1P32-201ENST00000425971 FADS2P1A8MWK0 482 aa8.61□□□□□ -1.03
HMGB1P32-201ENST00000425971 M0R2C6 588 aa8.61□□□□□ -1.03
HMGB1P32-201ENST00000425971 NPHS1O60500 1241 aa8.61□□□□□ -1.03
HMGB1P32-201ENST00000425971 SRGAP2CP0DJJ0 459 aa8.61□□□□□ -1.03
HMGB1P32-201ENST00000425971 RPL11P62913 178 aaKnown RBP8.61□□□□□ -1.03
HMGB1P32-201ENST00000425971 EXOSC10Q01780 885 aaKnown RBP8.61□□□□□ -1.03
HMGB1P32-201ENST00000425971 TMEM177Q53S58 311 aa8.61□□□□□ -1.03
HMGB1P32-201ENST00000425971 LHFPL2Q6ZUX7 228 aa8.61□□□□□ -1.03
HMGB1P32-201ENST00000425971 BCL7CQ8WUZ0 217 aaPredicted RBP8.61□□□□□ -1.03
HMGB1P32-201ENST00000425971 LINC01599Q8WXQ3 324 aa8.61□□□□□ -1.03
HMGB1P32-201ENST00000425971 HHIPL1Q96JK4 782 aa8.61□□□□□ -1.03
HMGB1P32-201ENST00000425971 CARS2Q9HA77 564 aaKnown RBP8.61□□□□□ -1.03
HMGB1P32-201ENST00000425971 CTTNBP2Q8WZ74 1663 aa8.61□□□□□ -1.03
HMGB1P32-201ENST00000425971 CNTLNQ9NXG0 1405 aa8.61□□□□□ -1.03
HMGB1P32-201ENST00000425971 MROH2AA6NES4 1674 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 FAM47E-STBD1D6RA91 191 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 TRAF5O00463 557 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 GPR39O43194 453 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 BRINP1O60477 761 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 F2P00734 622 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 CD96P40200 585 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 BCL6P41182 706 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 DSG1Q02413 1049 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 IKZF1Q13422 519 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 STAT4Q14765 748 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 OVCH1Q7RTY7 1134 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 NECAB2Q7Z6G3 386 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 SLCO6A1Q86UG4 719 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 STK11IPQ8N1F8 1099 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 FBXW5Q969U6 566 aa8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 BSDC1Q9NW68 430 aaPredicted RBP8.6□□□□□ -1.03
HMGB1P32-201ENST00000425971 ZNF891A8MT65 544 aaPredicted RBP8.59□□□□□ -1.03
HMGB1P32-201ENST00000425971 PRNPP04156 253 aa8.59□□□□□ -1.03
HMGB1P32-201ENST00000425971 S100BP04271 92 aaPredicted RBP8.59□□□□□ -1.03
HMGB1P32-201ENST00000425971 BNIP3Q12983 259 aa8.59□□□□□ -1.03
HMGB1P32-201ENST00000425971 FAM47CQ5HY64 1035 aa8.59□□□□□ -1.03
HMGB1P32-201ENST00000425971 PRSS36Q5K4E3 855 aa8.59□□□□□ -1.03
HMGB1P32-201ENST00000425971 C16orf59Q7L2K0 433 aa8.59□□□□□ -1.03
HMGB1P32-201ENST00000425971 CHST14Q8NCH0 376 aa8.59□□□□□ -1.03
HMGB1P32-201ENST00000425971 WDR66Q8TBY9 1149 aa8.59□□□□□ -1.03
HMGB1P32-201ENST00000425971 PI4K2BQ8TCG2 481 aa8.59□□□□□ -1.03
HMGB1P32-201ENST00000425971 USP7Q93009 1102 aa8.59□□□□□ -1.03
HMGB1P32-201ENST00000425971 JMJD8Q96S16 334 aa8.59□□□□□ -1.03
HMGB1P32-201ENST00000425971 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.59□□□□□ -1.03
HMGB1P32-201ENST00000425971 EBF1Q9UH73 591 aa8.59□□□□□ -1.03
HMGB1P32-201ENST00000425971 ADGRE2Q9UHX3 823 aa8.59□□□□□ -1.03
HMGB1P32-201ENST00000425971 WASHC2CQ9Y4E1 1318 aa8.58□□□□□ -1.04
HMGB1P32-201ENST00000425971 KDM5CP41229 1560 aa8.58□□□□□ -1.04
HMGB1P32-201ENST00000425971 CCDC66A2RUB6 948 aa8.58□□□□□ -1.04
HMGB1P32-201ENST00000425971 H7BY64 318 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms