RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 BRDTQ58F21 947 aaPredicted RBP33.49■■■□□ 2.95
CHCHD4-202ENST00000396914 KRT25Q7Z3Z0 450 aa33.49■■■□□ 2.95
CHCHD4-202ENST00000396914 PCSK9Q8NBP7 692 aaKnown RBP33.49■■■□□ 2.95
CHCHD4-202ENST00000396914 OXER1Q8TDS5 423 aa33.49■■■□□ 2.95
CHCHD4-202ENST00000396914 GPRASP2Q96D09 838 aa33.49■■■□□ 2.95
CHCHD4-202ENST00000396914 MXRA8Q9BRK3 442 aa33.49■■■□□ 2.95
CHCHD4-202ENST00000396914 SPATA31C2B4DYI2 1134 aa33.48■■■□□ 2.95
CHCHD4-202ENST00000396914 ZEB2O60315 1214 aa33.48■■■□□ 2.95
CHCHD4-202ENST00000396914 MMP1P03956 469 aa33.48■■■□□ 2.95
CHCHD4-202ENST00000396914 NONOQ15233 471 aaKnown RBP eCLIP33.48■■■□□ 2.95
CHCHD4-202ENST00000396914 SAFBQ15424 915 aaKnown RBP eCLIP33.48■■■□□ 2.95
CHCHD4-202ENST00000396914 HSCBQ8IWL3 235 aa33.48■■■□□ 2.95
CHCHD4-202ENST00000396914 KLHDC9Q8NEP7 349 aa33.48■■■□□ 2.95
CHCHD4-202ENST00000396914 CDHR1Q96JP9 859 aa33.48■■■□□ 2.95
CHCHD4-202ENST00000396914 JADE2Q9NQC1 790 aa33.48■■■□□ 2.95
CHCHD4-202ENST00000396914 PKD2L1Q9P0L9 805 aa33.48■■■□□ 2.95
CHCHD4-202ENST00000396914 K7ELQ4 463 aaPredicted RBP33.47■■■□□ 2.95
CHCHD4-202ENST00000396914 M0R2N6 131 aa33.47■■■□□ 2.95
CHCHD4-202ENST00000396914 GGPS1O95749 300 aa33.47■■■□□ 2.95
CHCHD4-202ENST00000396914 GJB2P29033 226 aa33.47■■■□□ 2.95
CHCHD4-202ENST00000396914 ICAM3P32942 547 aa33.47■■■□□ 2.95
CHCHD4-202ENST00000396914 CPT1AP50416 773 aa33.47■■■□□ 2.95
CHCHD4-202ENST00000396914 CEP55Q53EZ4 464 aa33.47■■■□□ 2.95
CHCHD4-202ENST00000396914 TBCKQ8TEA7 893 aa33.47■■■□□ 2.95
CHCHD4-202ENST00000396914 MLXIPQ9HAP2 919 aa33.47■■■□□ 2.95
CHCHD4-202ENST00000396914 UBA1P22314 1058 aaKnown RBP33.46■■■□□ 2.95
CHCHD4-202ENST00000396914 RGS19P49795 217 aa33.46■■■□□ 2.95
CHCHD4-202ENST00000396914 SP2Q02086 613 aa33.46■■■□□ 2.95
CHCHD4-202ENST00000396914 CYP2W1Q8TAV3 490 aa33.46■■■□□ 2.95
CHCHD4-202ENST00000396914 VTI1AQ96AJ9 217 aa33.46■■■□□ 2.95
CHCHD4-202ENST00000396914 TSEN34Q9BSV6 310 aaKnown RBP33.46■■■□□ 2.95
CHCHD4-202ENST00000396914 CST5P28325 142 aaPredicted RBP33.45■■■□□ 2.95
CHCHD4-202ENST00000396914 ACLYP53396 1101 aa33.45■■■□□ 2.95
CHCHD4-202ENST00000396914 ARHGAP1Q07960 439 aa33.45■■■□□ 2.95
CHCHD4-202ENST00000396914 PIK3AP1Q6ZUJ8 805 aa33.45■■■□□ 2.95
CHCHD4-202ENST00000396914 UBE2Q1Q7Z7E8 422 aa33.45■■■□□ 2.95
CHCHD4-202ENST00000396914 DIS3L2Q8IYB7 885 aaKnown RBP33.45■■■□□ 2.95
CHCHD4-202ENST00000396914 CTAGE5O15320 804 aa33.45■■■□□ 2.94
CHCHD4-202ENST00000396914 ASGR1P07306 291 aa33.45■■■□□ 2.94
CHCHD4-202ENST00000396914 CYP3A4P08684 503 aa33.45■■■□□ 2.94
CHCHD4-202ENST00000396914 SEMA3FQ13275 785 aa33.45■■■□□ 2.94
CHCHD4-202ENST00000396914 NR5A1Q13285 461 aa33.45■■■□□ 2.94
CHCHD4-202ENST00000396914 LAMC2Q13753 1193 aa33.45■■■□□ 2.94
CHCHD4-202ENST00000396914 NEDD9Q14511 834 aa33.45■■■□□ 2.94
CHCHD4-202ENST00000396914 CELF3Q5SZQ8 465 aaKnown RBP33.45■■■□□ 2.94
CHCHD4-202ENST00000396914 AFG1LQ8WV93 481 aa33.45■■■□□ 2.94
CHCHD4-202ENST00000396914 SNX21Q969T3 373 aa33.45■■■□□ 2.94
CHCHD4-202ENST00000396914 PHF24Q9UPV7 400 aa33.45■■■□□ 2.94
CHCHD4-202ENST00000396914 MOXD2PA6NHM9 499 aa33.44■■■□□ 2.94
CHCHD4-202ENST00000396914 MYL3P08590 195 aa33.44■■■□□ 2.94
CHCHD4-202ENST00000396914 GNL2Q13823 731 aaKnown RBP33.44■■■□□ 2.94
CHCHD4-202ENST00000396914 INF2Q27J81 1249 aa33.44■■■□□ 2.94
CHCHD4-202ENST00000396914 PLA2G4DQ86XP0 818 aa33.44■■■□□ 2.94
CHCHD4-202ENST00000396914 SPATA33Q96N06 139 aa33.44■■■□□ 2.94
CHCHD4-202ENST00000396914 MYH7BA7E2Y1 1941 aa33.44■■■□□ 2.94
CHCHD4-202ENST00000396914 BTBD18B2RXH4 712 aa33.43■■■□□ 2.94
CHCHD4-202ENST00000396914 MLLT1Q03111 559 aaPredicted RBP33.43■■■□□ 2.94
CHCHD4-202ENST00000396914 CUL4AQ13619 759 aa33.43■■■□□ 2.94
CHCHD4-202ENST00000396914 CYFIP1Q7L576 1253 aa33.43■■■□□ 2.94
CHCHD4-202ENST00000396914 CRYGNQ8WXF5 182 aa33.43■■■□□ 2.94
CHCHD4-202ENST00000396914 KCNH7Q9NS40 1196 aa33.43■■■□□ 2.94
CHCHD4-202ENST00000396914 A0A1W2PQ45 241 aaPredicted RBP33.42■■■□□ 2.94
CHCHD4-202ENST00000396914 A0A1W2PQY0 241 aa33.42■■■□□ 2.94
CHCHD4-202ENST00000396914 FAM86B1E9PN63 330 aa33.42■■■□□ 2.94
CHCHD4-202ENST00000396914 MAFGO15525 162 aa33.42■■■□□ 2.94
CHCHD4-202ENST00000396914 FAM86B2P0C5J1 330 aa33.42■■■□□ 2.94
CHCHD4-202ENST00000396914 COL6A1P12109 1028 aa33.42■■■□□ 2.94
CHCHD4-202ENST00000396914 USP11P51784 963 aa33.42■■■□□ 2.94
CHCHD4-202ENST00000396914 ATN1P54259 1190 aaPredicted RBP33.42■■■□□ 2.94
CHCHD4-202ENST00000396914 NKX3-2P78367 333 aa33.42■■■□□ 2.94
CHCHD4-202ENST00000396914 CCSAPQ6IQ19 270 aaPredicted RBP33.42■■■□□ 2.94
CHCHD4-202ENST00000396914 FBXO18Q8NFZ0 1043 aa33.42■■■□□ 2.94
CHCHD4-202ENST00000396914 HTATIP2Q9BUP3 242 aa33.42■■■□□ 2.94
CHCHD4-202ENST00000396914 FOXD4L1Q9NU39 408 aa33.42■■■□□ 2.94
CHCHD4-202ENST00000396914 MEIS1O00470 390 aa33.41■■■□□ 2.94
CHCHD4-202ENST00000396914 ARP10275 920 aa33.41■■■□□ 2.94
CHCHD4-202ENST00000396914 SP4Q02446 784 aa33.41■■■□□ 2.94
CHCHD4-202ENST00000396914 PRR16Q569H4 304 aa33.41■■■□□ 2.94
CHCHD4-202ENST00000396914 MYSM1Q5VVJ2 828 aa33.41■■■□□ 2.94
CHCHD4-202ENST00000396914 CXCL17Q6UXB2 119 aa33.41■■■□□ 2.94
CHCHD4-202ENST00000396914 GIMAP8Q8ND71 665 aaPredicted RBP33.41■■■□□ 2.94
CHCHD4-202ENST00000396914 GLT1D1Q96MS3 346 aa33.41■■■□□ 2.94
CHCHD4-202ENST00000396914 NOP56O00567 594 aaKnown RBP33.4■■■□□ 2.94
CHCHD4-202ENST00000396914 ATP9AO75110 1047 aa33.4■■■□□ 2.94
CHCHD4-202ENST00000396914 LETM2Q2VYF4 491 aa33.4■■■□□ 2.94
CHCHD4-202ENST00000396914 NIPA1Q7RTP0 329 aa33.4■■■□□ 2.94
CHCHD4-202ENST00000396914 EMID1Q96A84 441 aaPredicted RBP33.4■■■□□ 2.94
CHCHD4-202ENST00000396914 UIMC1Q96RL1 719 aa33.4■■■□□ 2.94
CHCHD4-202ENST00000396914 SENP7Q9BQF6 1050 aa33.4■■■□□ 2.94
CHCHD4-202ENST00000396914 BCAS3Q9H6U6 928 aa33.4■■■□□ 2.94
CHCHD4-202ENST00000396914 STARD7Q9NQZ5 370 aa33.4■■■□□ 2.94
CHCHD4-202ENST00000396914 POLR3EQ9NVU0 708 aa33.4■■■□□ 2.94
CHCHD4-202ENST00000396914 A6NJR5 290 aa33.39■■■□□ 2.94
CHCHD4-202ENST00000396914 H3BQV1 296 aa33.39■■■□□ 2.94
CHCHD4-202ENST00000396914 DPF3Q92784 378 aa33.39■■■□□ 2.94
CHCHD4-202ENST00000396914 MMP3P08254 477 aa33.38■■■□□ 2.93
CHCHD4-202ENST00000396914 SETQ01105 290 aaPredicted RBP33.38■■■□□ 2.93
CHCHD4-202ENST00000396914 METTL7BQ6UX53 244 aa33.38■■■□□ 2.93
CHCHD4-202ENST00000396914 NEK8Q86SG6 692 aa33.38■■■□□ 2.93
CHCHD4-202ENST00000396914 PPTC7Q8NI37 304 aa33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms