RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 MEIS1O00470 390 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 AFPP02771 609 aaKnown RBP17.35■□□□□ 0.37
COL18A1-203ENST00000359759 DPCR1Q3MIW9 517 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 ZC3H18Q86VM9 953 aaKnown RBP17.35■□□□□ 0.37
COL18A1-203ENST00000359759 FAM149B1Q96BN6 582 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 MRPL11Q9Y3B7 192 aaKnown RBP17.35■□□□□ 0.37
COL18A1-203ENST00000359759 PCGF5Q86SE9 256 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 PRAG1Q86YV5 1406 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 EXOC1LA0A1B0GW35 172 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 KITP10721 976 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 CTSWP56202 376 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 ANKRD36BP1Q96IX9 119 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 SMYD3Q9H7B4 428 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 MED23Q9ULK4 1368 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 HNRNPDLO14979 420 aaKnown RBP17.35■□□□□ 0.37
COL18A1-203ENST00000359759 SOX5P35711 763 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 Q3C1V9 767 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 C16orf87Q6PH81 154 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 KCNV2Q8TDN2 545 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 UBE2TQ9NPD8 197 aaPredicted RBP17.35■□□□□ 0.37
COL18A1-203ENST00000359759 GINM1Q9NU53 330 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 KCNG1Q9UIX4 513 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 AKT3Q9Y243 479 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 H0Y3Z8 333 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 PGRMC1O00264 195 aaKnown RBP17.35■□□□□ 0.37
COL18A1-203ENST00000359759 SKIP12755 728 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 LONP1P36776 959 aaKnown RBP17.35■□□□□ 0.37
COL18A1-203ENST00000359759 TTC30BQ8N4P2 665 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 MIS12Q9H081 205 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 NHEJ1Q9H9Q4 299 aaPredicted RBP17.35■□□□□ 0.37
COL18A1-203ENST00000359759 ZSWIM6Q9HCJ5 1215 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 HACD3Q9P035 362 aa17.35■□□□□ 0.37
COL18A1-203ENST00000359759 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.35■□□□□ 0.37
COL18A1-203ENST00000359759 PDHA1P08559 390 aa17.34■□□□□ 0.37
COL18A1-203ENST00000359759 CERKLQ49MI3 558 aaPredicted RBP17.34■□□□□ 0.37
COL18A1-203ENST00000359759 ZBTB33Q86T24 672 aa17.34■□□□□ 0.37
COL18A1-203ENST00000359759 HSPH1Q92598 858 aa17.34■□□□□ 0.37
COL18A1-203ENST00000359759 CCDC87Q9NVE4 849 aa17.34■□□□□ 0.37
COL18A1-203ENST00000359759 PPIP5K2O43314 1243 aa17.34■□□□□ 0.37
COL18A1-203ENST00000359759 NRBF2Q96F24 287 aa17.34■□□□□ 0.37
COL18A1-203ENST00000359759 TSC22D3Q99576 134 aa17.34■□□□□ 0.37
COL18A1-203ENST00000359759 MAN1B1Q9UKM7 699 aa17.34■□□□□ 0.37
COL18A1-203ENST00000359759 ARPP19P56211 112 aa17.34■□□□□ 0.37
COL18A1-203ENST00000359759 NIM1KQ8IY84 436 aa17.34■□□□□ 0.37
COL18A1-203ENST00000359759 ST13P4Q8IZP2 240 aaPredicted RBP17.34■□□□□ 0.37
COL18A1-203ENST00000359759 RPS6KC1Q96S38 1066 aa17.34■□□□□ 0.37
COL18A1-203ENST00000359759 ACSL3O95573 720 aa17.34■□□□□ 0.37
COL18A1-203ENST00000359759 NR1D1P20393 614 aa17.34■□□□□ 0.37
COL18A1-203ENST00000359759 PSMC2P35998 433 aaKnown RBP17.34■□□□□ 0.37
COL18A1-203ENST00000359759 GRAMD4Q6IC98 578 aa17.34■□□□□ 0.37
COL18A1-203ENST00000359759 EIF3CLB5ME19 914 aaKnown RBP17.34■□□□□ 0.37
COL18A1-203ENST00000359759 EIF3CQ99613 913 aaKnown RBP17.34■□□□□ 0.37
COL18A1-203ENST00000359759 EIF2AK4Q9P2K8 1649 aaKnown RBP17.34■□□□□ 0.37
COL18A1-203ENST00000359759 A0A087WUV0 522 aaPredicted RBP17.33■□□□□ 0.37
COL18A1-203ENST00000359759 PDIA3P30101 505 aaKnown RBP17.33■□□□□ 0.37
COL18A1-203ENST00000359759 ELAC2Q9BQ52 826 aaKnown RBP17.33■□□□□ 0.37
COL18A1-203ENST00000359759 CCPG1Q9ULG6 757 aa17.33■□□□□ 0.37
COL18A1-203ENST00000359759 PIK3C2GO75747 1445 aa17.33■□□□□ 0.37
COL18A1-203ENST00000359759 NEURL1BA8MQ27 555 aa17.33■□□□□ 0.37
COL18A1-203ENST00000359759 TMEM232C9JQI7 657 aa17.33■□□□□ 0.37
COL18A1-203ENST00000359759 SLMAPQ14BN4 828 aa17.33■□□□□ 0.37
COL18A1-203ENST00000359759 OCRLQ01968 901 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 C7orf31Q8N865 590 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 TM6SF1Q9BZW5 370 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 YY1AP1Q9H869 796 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 SPC25Q9HBM1 224 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 PHLPP2Q6ZVD8 1323 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 CLCN6P51797 869 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 DAB2P98082 770 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 RSRC2Q7L4I2 434 aaKnown RBP17.33■□□□□ 0.36
COL18A1-203ENST00000359759 ZWILCHQ9H900 591 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 PCDHA13Q9Y5I0 950 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 URB2Q14146 1524 aaKnown RBP17.33■□□□□ 0.36
COL18A1-203ENST00000359759 hCG_2014768A0A024R1R8 64 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 TCIRG1Q13488 830 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 KRT27Q7Z3Y8 459 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 RAPGEF5Q92565 580 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 NCLNQ969V3 563 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 FTOQ9C0B1 505 aaKnown RBP eCLIP17.33■□□□□ 0.365e-9■■■■■ 33.5
COL18A1-203ENST00000359759 PCDHA5Q9Y5H7 936 aa17.33■□□□□ 0.36
COL18A1-203ENST00000359759 A0A0G2JND7 137 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 SYNDIG1LA6NDD5 238 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 MCF2P10911 925 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 OSTNP61366 133 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 NSUN2Q08J23 767 aaKnown RBP eCLIP17.32■□□□□ 0.36
COL18A1-203ENST00000359759 FAM186BQ8IYM0 893 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 SPICE1Q8N0Z3 855 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 ZMYND12Q9H0C1 365 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 GCNT4Q9P109 453 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 FGAP02671 866 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 BTDP43251 543 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 SCARA5Q6ZMJ2 495 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 AS3MTQ9HBK9 375 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 ABCB6Q9NP58 842 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 PI4K2BG5E9Z4 385 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 RASGRF2O14827 1237 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 CD58P19256 250 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 KCTD1Q719H9 257 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 SZRD1Q7Z422 152 aa17.32■□□□□ 0.36
COL18A1-203ENST00000359759 SNX25Q9H3E2 840 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms