RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 RETREG2Q8NC44 543 aa14.46□□□□□ -0.1
NUP54-201ENST00000264883 CCHCR1Q8TD31 782 aa14.46□□□□□ -0.1
NUP54-201ENST00000264883 TRMT112Q9UI30 125 aaKnown RBP14.46□□□□□ -0.1
NUP54-201ENST00000264883 DLEC1Q9Y238 1755 aa14.46□□□□□ -0.1
NUP54-201ENST00000264883 PPIP5K2O43314 1243 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 MOCS3O95396 460 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 LONP1P36776 959 aaKnown RBP14.45□□□□□ -0.1
NUP54-201ENST00000264883 FUT2Q10981 343 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 CDC37Q16543 378 aaPredicted RBP14.45□□□□□ -0.1
NUP54-201ENST00000264883 WHAMMQ8TF30 809 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 TCP11Q8WWU5 503 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 ZKSCAN3Q9BRR0 538 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 BLZF1Q9H2G9 400 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 MLXIPQ9HAP2 919 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 SLC12A6Q9UHW9 1150 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 ZSCAN5CA6NGD5 496 aaPredicted RBP14.45□□□□□ -0.1
NUP54-201ENST00000264883 GCOM1H8Y6P7 765 aaPredicted RBP14.45□□□□□ -0.1
NUP54-201ENST00000264883 MYZAPP0CAP1 466 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 TMOD1P28289 359 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 PDE6BP35913 854 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 RPS6KA3P51812 740 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 RIPK1Q13546 671 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 CLEC4GQ6UXB4 293 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 LCORLQ8N3X6 602 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 THAP9Q9H5L6 903 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 SH2D4AQ9H788 454 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 AGPAT5Q9NUQ2 364 aa14.45□□□□□ -0.1
NUP54-201ENST00000264883 CCNL1Q9UK58 526 aaPredicted RBP14.45□□□□□ -0.1
NUP54-201ENST00000264883 CORO1CQ9ULV4 474 aaPredicted RBP14.45□□□□□ -0.1
NUP54-201ENST00000264883 DUOX1Q9NRD9 1551 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 BACH1O14867 736 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 RPN1P04843 607 aaKnown RBP14.44□□□□□ -0.1
NUP54-201ENST00000264883 PRPHP41219 470 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 PARP10Q53GL7 1025 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 SUSD4Q5VX71 490 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 CPLX4Q7Z7G2 160 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 CCDC82Q8N4S0 544 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 CCDC63Q8NA47 563 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 ZNF507Q8TCN5 953 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 RAPGEF5Q92565 580 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 ALS2CR12Q96Q35 445 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 ZSCAN10Q96SZ4 725 aaPredicted RBP14.44□□□□□ -0.1
NUP54-201ENST00000264883 YIPF3Q9GZM5 350 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 IRAK4Q9NWZ3 460 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 L3MBTL1Q9Y468 752 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 RPS6KA4O75676 772 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 CLTAP09496 248 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 CDC25CP30307 473 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 RAB27AP51159 221 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 PTGDRQ13258 359 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 SNX1Q13596 522 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 THEMIS2Q5TEJ8 643 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 LRIG3Q6UXM1 1119 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 ZNF570Q96NI8 536 aa14.44□□□□□ -0.1
NUP54-201ENST00000264883 NOP53Q9NZM5 478 aaKnown RBP14.44□□□□□ -0.1
NUP54-201ENST00000264883 PDS5AQ29RF7 1337 aaKnown RBP14.43□□□□□ -0.1
NUP54-201ENST00000264883 MYH13Q9UKX3 1938 aa14.43□□□□□ -0.1
NUP54-201ENST00000264883 ZNF263O14978 683 aa14.43□□□□□ -0.1
NUP54-201ENST00000264883 NCK2O43639 380 aa14.43□□□□□ -0.1
NUP54-201ENST00000264883 TRIM21P19474 475 aaKnown RBP14.43□□□□□ -0.1
NUP54-201ENST00000264883 PPP1R2P41236 205 aa14.43□□□□□ -0.1
NUP54-201ENST00000264883 ODF2Q5BJF6 829 aa14.43□□□□□ -0.1
NUP54-201ENST00000264883 PNMA8AQ86V59 439 aaPredicted RBP14.43□□□□□ -0.1
NUP54-201ENST00000264883 NBPF5PQ86XG9 351 aaPredicted RBP14.43□□□□□ -0.1
NUP54-201ENST00000264883 IRF2BP1Q8IU81 584 aa14.43□□□□□ -0.1
NUP54-201ENST00000264883 CASKIN2Q8WXE0 1202 aa14.43□□□□□ -0.1
NUP54-201ENST00000264883 CCDC42Q96M95 316 aa14.43□□□□□ -0.1
NUP54-201ENST00000264883 FAM210AQ96ND0 272 aa14.43□□□□□ -0.1
NUP54-201ENST00000264883 TAF1DQ9H5J8 278 aaPredicted RBP14.43□□□□□ -0.1
NUP54-201ENST00000264883 PLCB1Q9NQ66 1216 aa14.43□□□□□ -0.1
NUP54-201ENST00000264883 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.43□□□□□ -0.1
NUP54-201ENST00000264883 MAPK8IP1Q9UQF2 711 aa14.43□□□□□ -0.1
NUP54-201ENST00000264883 LAMB2P55268 1798 aa14.43□□□□□ -0.1
NUP54-201ENST00000264883 CCT8L1PA6NM43 557 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 PRKAB2O43741 272 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 TRIM37O94972 964 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 HSPA9P38646 679 aaKnown RBP14.42□□□□□ -0.1
NUP54-201ENST00000264883 DNM2P50570 870 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 ZBED6P86452 979 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 ZNF174Q15697 407 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 CFAP221Q4G0U5 840 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 IFIT1BQ5T764 474 aaKnown RBP14.42□□□□□ -0.1
NUP54-201ENST00000264883 TMTC3Q6ZXV5 915 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 KRT26Q7Z3Y9 468 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 CMTR1Q8N1G2 835 aaKnown RBP14.42□□□□□ -0.1
NUP54-201ENST00000264883 L3MBTL3Q96JM7 780 aaPredicted RBP14.42□□□□□ -0.1
NUP54-201ENST00000264883 IFIH1Q9BYX4 1025 aaKnown RBP14.42□□□□□ -0.1
NUP54-201ENST00000264883 NUCKS1Q9H1E3 243 aaKnown RBP14.42□□□□□ -0.1
NUP54-201ENST00000264883 MAGEC2Q9UBF1 373 aaPredicted RBP14.42□□□□□ -0.1
NUP54-201ENST00000264883 FAM205CA6NFA0 338 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 NTSR2O95665 410 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 PAEPP09466 180 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 PPP2R2AP63151 447 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 CDK17Q00537 523 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 ADSSL1Q8N142 457 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 MS4A14Q96JA4 679 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 TTYH3Q9C0H2 523 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 ZNF652Q9Y2D9 606 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 PCDHA13Q9Y5I0 950 aa14.42□□□□□ -0.1
NUP54-201ENST00000264883 PHF20L1A8MW92 1017 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms