RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ATF7P17544 494 aaPredicted RBP12.57□□□□□ -0.4
NOD1-201ENST00000222823 GAP43P17677 238 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 ARHGAP25P42331 645 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 RBL2Q08999 1139 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 SDCCAG8Q86SQ7 713 aaPredicted RBP12.57□□□□□ -0.4
NOD1-201ENST00000222823 FAM186BQ8IYM0 893 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 SLC7A3Q8WY07 619 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 NT5C1BQ96P26 610 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 NACC1Q96RE7 527 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 HOMER3Q9NSC5 361 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 MYO1FO00160 1098 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 ENC1O14682 589 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 PSMC2P35998 433 aaKnown RBP12.57□□□□□ -0.4
NOD1-201ENST00000222823 CDK8P49336 464 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 NT5C2P49902 561 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 BPIFB4P59827 614 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 SRGAP1Q7Z6B7 1085 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 NSMCE1Q8WV22 266 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 P3H4Q92791 437 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 DCPSQ96C86 337 aaKnown RBP12.57□□□□□ -0.4
NOD1-201ENST00000222823 BRIP1Q9BX63 1249 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 KCNF1Q9H3M0 494 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 RIPOR2Q9Y4F9 1068 aa12.57□□□□□ -0.4
NOD1-201ENST00000222823 ZNF335Q9H4Z2 1342 aaPredicted RBP12.57□□□□□ -0.4
NOD1-201ENST00000222823 RPS6KA4O75676 772 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 RAD17O75943 681 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 RNF8O76064 485 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 IQCB1Q15051 598 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 ANKRD20A3Q5VUR7 823 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 NAA35Q5VZE5 725 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 RNF169Q8NCN4 708 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 HINFPQ9BQA5 517 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 ANKFY1Q9P2R3 1169 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 KDM6AO15550 1401 aaPredicted RBP12.56□□□□□ -0.4
NOD1-201ENST00000222823 CIB2O75838 187 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 STX2P32856 288 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 ARL6IP4Q66PJ3 421 aaKnown RBP12.56□□□□□ -0.4
NOD1-201ENST00000222823 KRT27Q7Z3Y8 459 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 SYNE4Q8N205 404 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 ANKRD42Q8N9B4 389 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.56□□□□□ -0.4
NOD1-201ENST00000222823 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.56□□□□□ -0.4
NOD1-201ENST00000222823 MKRN1Q9UHC7 482 aaKnown RBP12.56□□□□□ -0.4
NOD1-201ENST00000222823 RNF40O75150 1001 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 ZNF131P52739 623 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 ATP11AP98196 1134 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 KCTD2Q14681 263 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 PPP2R5AQ15172 486 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 CCDC144BQ3MJ40 725 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 RESP18Q5W5W9 173 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 CYB5R4Q7L1T6 521 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 PALM2Q8IXS6 379 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 MCUR1Q96AQ8 359 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 MTA3Q9BTC8 594 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 MIS12Q9H081 205 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 GMNNO75496 209 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 CRCPO75575 148 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 CSF1RP07333 972 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 PLCG1P19174 1290 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 PRDX5P30044 214 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 STAT2P52630 851 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 ST3GAL1Q11201 340 aa12.56□□□□□ -0.4
NOD1-201ENST00000222823 FOXP4Q8IVH2 680 aaPredicted RBP12.56□□□□□ -0.4
NOD1-201ENST00000222823 OSBPL5Q9H0X9 879 aaPredicted RBP12.56□□□□□ -0.4
NOD1-201ENST00000222823 I3L4J1 428 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 MEIS1O00470 390 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 PLEKHA8P1O95397 391 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 CTDNEP1O95476 244 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 LMNB1P20700 586 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 MYL7Q01449 175 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 GUCY2DQ02846 1103 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 MGARPQ8TDB4 240 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 GRK7Q8WTQ7 553 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 ATP2A3Q93084 1043 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 COA1Q9GZY4 146 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 EMILIN3Q9NT22 766 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 MEGF6O75095 1541 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 CAPN9O14815 690 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 AFPP02771 609 aaKnown RBP12.55□□□□□ -0.4
NOD1-201ENST00000222823 MESDQ14696 234 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 CCDC62Q6P9F0 684 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 SGMS1Q86VZ5 419 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 STAG1Q8WVM7 1258 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 RWDD2AQ9UIY3 292 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 ZNF148Q9UQR1 794 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 PIK3C2AO00443 1686 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 CLIC2O15247 247 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 ATP1A3P13637 1013 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 MFAP3P55082 362 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 GKAP1Q5VSY0 366 aaPredicted RBP12.55□□□□□ -0.4
NOD1-201ENST00000222823 FAM160B1Q5W0V3 765 aa12.55□□□□□ -0.4
NOD1-201ENST00000222823 DHX40Q8IX18 779 aaKnown RBP12.55□□□□□ -0.4
NOD1-201ENST00000222823 CYP19A1P11511 503 aaPredicted RBP12.54□□□□□ -0.4
NOD1-201ENST00000222823 PTPREP23469 700 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 SARNPP82979 210 aaKnown RBP12.54□□□□□ -0.4
NOD1-201ENST00000222823 ZBED6P86452 979 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 KRT81Q14533 505 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 ARID5BQ14865 1188 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 GPR162Q16538 588 aa12.54□□□□□ -0.4
NOD1-201ENST00000222823 ZSCAN26Q16670 478 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms