RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W TAF11Q04226 346 aa3.5□□□□□ -1.85
RPN9YDR427W PGA3Q12746 312 aaKnown RBP3.5□□□□□ -1.85
RPN9YDR427W SPB1P25582 841 aaPredicted RBP3.49□□□□□ -1.85
RPN9YDR427W NPL6P32832 435 aa3.49□□□□□ -1.85
RPN9YDR427W FRE2P36033 711 aa3.49□□□□□ -1.85
RPN9YDR427W THI2P38141 450 aa3.49□□□□□ -1.85
RPN9YDR427W RRT5P43607 289 aa3.49□□□□□ -1.85
RPN9YDR427W ART5P53244 586 aaKnown RBP3.49□□□□□ -1.85
RPN9YDR427W WSC2P53832 503 aa3.49□□□□□ -1.85
RPN9YDR427W LEU4P06208 619 aaKnown RBP3.48□□□□□ -1.85
RPN9YDR427W HIP1P06775 603 aa3.48□□□□□ -1.85
RPN9YDR427W ERG3P32353 365 aa3.48□□□□□ -1.85
RPN9YDR427W FAA2P39518 744 aa3.48□□□□□ -1.85
RPN9YDR427W TFG2P41896 400 aaPredicted RBP3.48□□□□□ -1.85
RPN9YDR427W TRS85P46944 698 aa3.48□□□□□ -1.85
RPN9YDR427W YGR149WP48236 432 aa3.48□□□□□ -1.85
RPN9YDR427W AVT4P50944 713 aa3.48□□□□□ -1.85
RPN9YDR427W KTR5P53966 522 aaPredicted RBP3.48□□□□□ -1.85
RPN9YDR427W SOV1Q04748 898 aa3.48□□□□□ -1.85
RPN9YDR427W YER078W-AQ3E7A2 54 aa3.48□□□□□ -1.85
RPN9YDR427W REV1P12689 985 aa3.47□□□□□ -1.85
RPN9YDR427W AFG1P32317 509 aa3.47□□□□□ -1.85
RPN9YDR427W NDI1P32340 513 aa3.47□□□□□ -1.85
RPN9YDR427W HXT3P32466 567 aaKnown RBP3.47□□□□□ -1.85
RPN9YDR427W GLC7P32598 312 aaKnown RBP3.47□□□□□ -1.85
RPN9YDR427W YBP1P38315 674 aa3.47□□□□□ -1.85
RPN9YDR427W YPI1P43587 155 aa3.47□□□□□ -1.85
RPN9YDR427W PIR3Q03180 325 aa3.47□□□□□ -1.85
RPN9YDR427W SPS4P09937 338 aa3.46□□□□□ -1.86
RPN9YDR427W RSM22P36056 628 aa3.46□□□□□ -1.86
RPN9YDR427W CCT2P39076 527 aaKnown RBP3.46□□□□□ -1.86
RPN9YDR427W ISC1P40015 477 aaKnown RBP3.46□□□□□ -1.86
RPN9YDR427W RMD9P53140 646 aaKnown RBP3.46□□□□□ -1.86
RPN9YDR427W CAF40P53829 373 aa3.46□□□□□ -1.86
RPN9YDR427W RPA49Q01080 415 aaPredicted RBP3.46□□□□□ -1.86
RPN9YDR427W MDM1Q01846 1127 aa3.46□□□□□ -1.86
RPN9YDR427W ODC1Q03028 310 aa3.46□□□□□ -1.86
RPN9YDR427W VTA1Q06263 330 aa3.46□□□□□ -1.86
RPN9YDR427W RTN2Q12443 393 aa3.46□□□□□ -1.86
RPN9YDR427W YOL159C-AQ3E769 90 aa3.46□□□□□ -1.86
RPN9YDR427W YML133CQ03099 1374 aa3.46□□□□□ -1.86
RPN9YDR427W YLL067CQ07888 1374 aa3.46□□□□□ -1.86
RPN9YDR427W YLL066CQ99208 1374 aa3.46□□□□□ -1.86
RPN9YDR427W GPH1P06738 902 aaKnown RBP3.45□□□□□ -1.86
RPN9YDR427W CHS1P08004 1131 aa3.45□□□□□ -1.86
RPN9YDR427W RED1P14291 827 aa3.45□□□□□ -1.86
RPN9YDR427W YCR100CP25606 316 aa3.45□□□□□ -1.86
RPN9YDR427W CRM1P30822 1084 aaKnown RBP3.45□□□□□ -1.86
RPN9YDR427W PRP21P32524 280 aaPredicted RBP3.45□□□□□ -1.86
RPN9YDR427W NIP100P33420 868 aa3.45□□□□□ -1.86
RPN9YDR427W OTU2P38747 307 aaKnown RBP3.45□□□□□ -1.86
RPN9YDR427W SPG5P42933 373 aa3.45□□□□□ -1.86
RPN9YDR427W VTC2P43585 828 aa3.45□□□□□ -1.86
RPN9YDR427W NCS2P53923 493 aaPredicted RBP3.45□□□□□ -1.86
RPN9YDR427W PNG1Q02890 363 aa3.45□□□□□ -1.86
RPN9YDR427W GIR2Q03768 265 aaPredicted RBP3.45□□□□□ -1.86
RPN9YDR427W RIP1P08067 215 aa3.44□□□□□ -1.86
RPN9YDR427W CPR1P14832 162 aaKnown RBP3.44□□□□□ -1.86
RPN9YDR427W SEC63P14906 663 aa3.44□□□□□ -1.86
RPN9YDR427W HEM15P16622 393 aa3.44□□□□□ -1.86
RPN9YDR427W SNT1P25357 1226 aa3.44□□□□□ -1.86
RPN9YDR427W MRP4P32902 394 aa3.44□□□□□ -1.86
RPN9YDR427W CBP4P37267 147 aa3.44□□□□□ -1.86
RPN9YDR427W MKT1P40850 830 aaKnown RBP3.44□□□□□ -1.86
RPN9YDR427W DLD2P46681 530 aaKnown RBP3.44□□□□□ -1.86
RPN9YDR427W SRB7P47822 140 aa3.44□□□□□ -1.86
RPN9YDR427W POP6P53218 158 aa3.44□□□□□ -1.86
RPN9YDR427W SCM3Q12334 223 aa3.44□□□□□ -1.86
RPN9YDR427W INH1P01097 85 aa3.43□□□□□ -1.86
RPN9YDR427W PPH22P23595 377 aa3.43□□□□□ -1.86
RPN9YDR427W IDH2P28241 369 aaKnown RBP3.43□□□□□ -1.86
RPN9YDR427W YIM1P28625 365 aa3.43□□□□□ -1.86
RPN9YDR427W RFS1P38234 210 aaKnown RBP3.43□□□□□ -1.86
RPN9YDR427W HSP31Q04432 237 aa3.43□□□□□ -1.86
RPN9YDR427W YLR287CQ05881 355 aa3.43□□□□□ -1.86
RPN9YDR427W ERV2Q12284 196 aa3.43□□□□□ -1.86
RPN9YDR427W YAR066WP0CX18 203 aa3.42□□□□□ -1.86
RPN9YDR427W YHR214WP0CX19 203 aa3.42□□□□□ -1.86
RPN9YDR427W RML2P32611 393 aa3.42□□□□□ -1.86
RPN9YDR427W REC114P32841 428 aa3.42□□□□□ -1.86
RPN9YDR427W MIX23P38162 196 aa3.42□□□□□ -1.86
RPN9YDR427W RFC3P38629 340 aa3.42□□□□□ -1.86
RPN9YDR427W YIP1P53039 248 aa3.42□□□□□ -1.86
RPN9YDR427W YGL242CP53066 181 aa3.42□□□□□ -1.86
RPN9YDR427W SHE10P53075 577 aa3.42□□□□□ -1.86
RPN9YDR427W SYF1Q04048 859 aaPredicted RBP3.42□□□□□ -1.86
RPN9YDR427W THP3Q12049 470 aaKnown RBP3.42□□□□□ -1.86
RPN9YDR427W SFI1Q12369 946 aa3.42□□□□□ -1.86
RPN9YDR427W SPT15P13393 240 aaKnown RBP3.41□□□□□ -1.86
RPN9YDR427W RPL3P14126 387 aaKnown RBP3.41□□□□□ -1.86
RPN9YDR427W CLC1P17891 233 aa3.41□□□□□ -1.86
RPN9YDR427W GEX1P25596 615 aa3.41□□□□□ -1.86
RPN9YDR427W ECM25P32525 599 aa3.41□□□□□ -1.86
RPN9YDR427W NFU1P32860 256 aa3.41□□□□□ -1.86
RPN9YDR427W SAS3P34218 831 aa3.41□□□□□ -1.86
RPN9YDR427W YCR041WP37265 110 aa3.41□□□□□ -1.86
RPN9YDR427W LSM5P40089 93 aaKnown RBP3.41□□□□□ -1.86
RPN9YDR427W YGR250CP53316 781 aaKnown RBP3.41□□□□□ -1.86
RPN9YDR427W IBD2P53892 351 aa3.41□□□□□ -1.86
RPN9YDR427W MRP51Q02950 344 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 108.1 ms