RNA–Protein interactions for RNA: YDR119W

VBA4, Transcript of Protein of unknown function, yeast

Gene VBA4, Length 2,307 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VBA4	YDR119W	CTH1	P47976	325 aa		3.11	□□□□□ -1.91
VBA4	YDR119W	YNL146W	P53906	100 aa		3.11	□□□□□ -1.91
VBA4	YDR119W	ESBP6	P53918	673 aa		3.11	□□□□□ -1.91
VBA4	YDR119W	ADE16	P54113	591 aa	Known RBP	3.11	□□□□□ -1.91
VBA4	YDR119W	STD1	Q02794	444 aa		3.11	□□□□□ -1.91
VBA4	YDR119W	COQ9	Q05779	260 aa		3.11	□□□□□ -1.91
VBA4	YDR119W	IZH3	Q07959	543 aa		3.11	□□□□□ -1.91
VBA4	YDR119W	GAS5	Q08193	484 aa		3.11	□□□□□ -1.91
VBA4	YDR119W	ATG9	Q12142	997 aa		3.11	□□□□□ -1.91
VBA4	YDR119W	CYC1	P00044	109 aa	Predicted RBP	3.1	□□□□□ -1.91
VBA4	YDR119W	KGD2	P19262	463 aa	Predicted RBP	3.1	□□□□□ -1.91
VBA4	YDR119W	RVS161	P25343	265 aa	Known RBP	3.1	□□□□□ -1.91
VBA4	YDR119W	ELO2	P25358	347 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	MGR1	P25573	417 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	CDC20	P26309	610 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	CYM1	P32898	989 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	LHS1	P36016	881 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	RPF2	P36160	344 aa	Known RBP	3.1	□□□□□ -1.91
VBA4	YDR119W	KAP104	P38217	918 aa	Known RBP	3.1	□□□□□ -1.91
VBA4	YDR119W	OLA1	P38219	394 aa	Known RBP	3.1	□□□□□ -1.91
VBA4	YDR119W	YHR210C	P38893	341 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	ECM10	P39987	644 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	RPN11	P43588	306 aa	Known RBP	3.1	□□□□□ -1.91
VBA4	YDR119W	MPS3	P47069	682 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	YGL108C	P53139	140 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	SLU7	Q02775	382 aa	Known RBP	3.1	□□□□□ -1.91
VBA4	YDR119W	MUK1	Q02866	612 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	PLB2	Q03674	706 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	YMR310C	Q04867	317 aa	Predicted RBP	3.1	□□□□□ -1.91
VBA4	YDR119W	RXT3	Q07458	294 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	CYK3	Q07533	885 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	YPL216W	Q08964	1102 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	BTS1	Q12051	335 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	AAC1	P04710	309 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	HIS5	P07172	385 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	SPE2	P21182	396 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	KRE2	P27809	442 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	CNE1	P27825	502 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	GAC1	P28006	793 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	ITR1	P30605	584 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	PSO2	P30620	661 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	RAD23	P32628	398 aa	Known RBP	3.1	□□□□□ -1.91
VBA4	YDR119W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
VBA4	YDR119W	PCA1	P38360	1216 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	PLB1	P39105	664 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	CIN4	P39110	191 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	YIR042C	P40586	236 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	BAP3	P41815	604 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	TOS3	P43637	560 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	GTF1	P53260	183 aa	Predicted RBP	3.1	□□□□□ -1.91
VBA4	YDR119W	MRPL35	Q06678	367 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	POS5	Q06892	414 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
VBA4	YDR119W	YOS9	Q99220	542 aa		3.1	□□□□□ -1.91
VBA4	YDR119W	RHO2	P06781	192 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	HXT2	P23585	541 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	YUR1	P26725	428 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	GAR1	P28007	205 aa	Known RBP	3.09	□□□□□ -1.91
VBA4	YDR119W	ICL1	P28240	557 aa	Predicted RBP	3.09	□□□□□ -1.91
VBA4	YDR119W	YPS1	P32329	569 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	YKL071W	P36086	256 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	VHC1	P38329	1120 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	YHR182W	P38870	785 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	ALP1	P38971	573 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	OPT1	P40897	799 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	ATG27	P46989	271 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	LOH1	P47055	219 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	DRN1	P53255	507 aa	Known RBP	3.09	□□□□□ -1.91
VBA4	YDR119W	RET3	P53600	189 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	YNL260C	P53846	198 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	YDL242W	Q07746	117 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	TEN1	Q07921	160 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	BSC6	Q08280	497 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	YBL111C	Q3E7Y5	667 aa		3.09	□□□□□ -1.91
VBA4	YDR119W	COX3	P00420	269 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	PMA1	P05030	918 aa	Known RBP	3.09	□□□□□ -1.92
VBA4	YDR119W	MAS1	P10507	462 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	PCT1	P13259	424 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	LAC1	P28496	418 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	EMP70	P32802	667 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	ECT1	P33412	323 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	RPC25	P35718	212 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	OCT1	P35999	772 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	KDX1	P36005	433 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	RPL32	P38061	130 aa	Known RBP	3.09	□□□□□ -1.92
VBA4	YDR119W	DUG2	P38149	878 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	MAL32	P38158	584 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	SPP381	P38282	291 aa	Predicted RBP	3.09	□□□□□ -1.92
VBA4	YDR119W	SPC97	P38863	823 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	GPI16	P38875	610 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	YFR020W	P43600	232 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	CHA4	P43634	648 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	MAL12	P53341	584 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	BNA7	Q04066	261 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	URH1	Q04179	340 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	PDR8	Q06149	701 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	CTS2	Q06350	511 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	PEX27	Q08580	376 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	RDR1	Q08904	546 aa		3.09	□□□□□ -1.92
VBA4	YDR119W	PUS9	Q12069	462 aa		3.09	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 13 ms