RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W ROY1Q04847 553 aa3.49□□□□□ -1.85
UBC9YDL064W YLR345WQ06137 509 aa3.49□□□□□ -1.85
UBC9YDL064W LEU4P06208 619 aaKnown RBP3.48□□□□□ -1.85
UBC9YDL064W MTF1P14908 341 aaKnown RBP3.48□□□□□ -1.85
UBC9YDL064W MCK1P21965 375 aaKnown RBP3.48□□□□□ -1.85
UBC9YDL064W AGA1P32323 725 aa3.48□□□□□ -1.85
UBC9YDL064W MFT1P33441 392 aaKnown RBP3.48□□□□□ -1.85
UBC9YDL064W PMU1P36069 295 aa3.48□□□□□ -1.85
UBC9YDL064W KRE9P39005 276 aa3.48□□□□□ -1.85
UBC9YDL064W CCT2P39076 527 aaKnown RBP3.48□□□□□ -1.85
UBC9YDL064W ISC1P40015 477 aaKnown RBP3.48□□□□□ -1.85
UBC9YDL064W SSU1P41930 458 aa3.48□□□□□ -1.85
UBC9YDL064W RMD9P53140 646 aaKnown RBP3.48□□□□□ -1.85
UBC9YDL064W CRZ1P53968 678 aa3.48□□□□□ -1.85
UBC9YDL064W VPS74Q06385 345 aa3.48□□□□□ -1.85
UBC9YDL064W SET6Q12529 373 aa3.48□□□□□ -1.85
UBC9YDL064W AFI1Q99222 893 aa3.48□□□□□ -1.85
UBC9YDL064W GDH1P07262 454 aaKnown RBP3.47□□□□□ -1.85
UBC9YDL064W RIP1P08067 215 aa3.47□□□□□ -1.85
UBC9YDL064W RPL20AP0CX23 172 aaKnown RBP3.47□□□□□ -1.85
UBC9YDL064W RPL20BP0CX24 172 aaPredicted RBP3.47□□□□□ -1.85
UBC9YDL064W SEC63P14906 663 aa3.47□□□□□ -1.85
UBC9YDL064W YUR1P26725 428 aa3.47□□□□□ -1.85
UBC9YDL064W URA7P28274 579 aaKnown RBP3.47□□□□□ -1.85
UBC9YDL064W PRP21P32524 280 aaPredicted RBP3.47□□□□□ -1.85
UBC9YDL064W YME2P32843 850 aa3.47□□□□□ -1.85
UBC9YDL064W GCD10P41814 478 aa3.47□□□□□ -1.85
UBC9YDL064W TRS85P46944 698 aa3.47□□□□□ -1.85
UBC9YDL064W COS10P52924 374 aa3.47□□□□□ -1.85
UBC9YDL064W WSC2P53832 503 aa3.47□□□□□ -1.85
UBC9YDL064W ERP1Q05359 219 aaKnown RBP3.47□□□□□ -1.85
UBC9YDL064W CTF3Q12748 733 aa3.47□□□□□ -1.85
UBC9YDL064W YLR278CQ05854 1341 aa3.46□□□□□ -1.85
UBC9YDL064W GPH1P06738 902 aaKnown RBP3.46□□□□□ -1.86
UBC9YDL064W EXO70P19658 623 aa3.46□□□□□ -1.86
UBC9YDL064W PRO3P32263 286 aaKnown RBP3.46□□□□□ -1.86
UBC9YDL064W VHC1P38329 1120 aa3.46□□□□□ -1.86
UBC9YDL064W ALG8P40351 577 aa3.46□□□□□ -1.86
UBC9YDL064W SAS2P40963 338 aa3.46□□□□□ -1.86
UBC9YDL064W URB2P47108 1174 aa3.46□□□□□ -1.86
UBC9YDL064W AVT4P50944 713 aa3.46□□□□□ -1.86
UBC9YDL064W ART5P53244 586 aaKnown RBP3.46□□□□□ -1.86
UBC9YDL064W PCP1P53259 346 aa3.46□□□□□ -1.86
UBC9YDL064W ERB1Q04660 807 aaKnown RBP3.46□□□□□ -1.86
UBC9YDL064W SOV1Q04748 898 aa3.46□□□□□ -1.86
UBC9YDL064W PRP16P15938 1071 aaPredicted RBP3.45□□□□□ -1.86
UBC9YDL064W MDM31P38880 579 aa3.45□□□□□ -1.86
UBC9YDL064W YJL213WP40896 331 aa3.45□□□□□ -1.86
UBC9YDL064W ELP2P42935 788 aa3.45□□□□□ -1.86
UBC9YDL064W RPS0BP46654 252 aaKnown RBP3.45□□□□□ -1.86
UBC9YDL064W FMS1P50264 508 aa3.45□□□□□ -1.86
UBC9YDL064W YGL138CP53122 345 aa3.45□□□□□ -1.86
UBC9YDL064W YIF1P53845 314 aaKnown RBP3.45□□□□□ -1.86
UBC9YDL064W GIR2Q03768 265 aaPredicted RBP3.45□□□□□ -1.86
UBC9YDL064W YDR387CQ04162 555 aa3.45□□□□□ -1.86
UBC9YDL064W MDM30Q05930 598 aa3.45□□□□□ -1.86
UBC9YDL064W ERP4Q12450 207 aa3.45□□□□□ -1.86
UBC9YDL064W REC107P21651 314 aa3.44□□□□□ -1.86
UBC9YDL064W RNA14P25298 677 aaKnown RBP3.44□□□□□ -1.86
UBC9YDL064W GEX1P25596 615 aa3.44□□□□□ -1.86
UBC9YDL064W YCR100CP25606 316 aa3.44□□□□□ -1.86
UBC9YDL064W HIR2P32480 875 aa3.44□□□□□ -1.86
UBC9YDL064W GLC7P32598 312 aaKnown RBP3.44□□□□□ -1.86
UBC9YDL064W RSM22P36056 628 aa3.44□□□□□ -1.86
UBC9YDL064W YCR041WP37265 110 aa3.44□□□□□ -1.86
UBC9YDL064W CBP4P37267 147 aa3.44□□□□□ -1.86
UBC9YDL064W RFC3P38629 340 aa3.44□□□□□ -1.86
UBC9YDL064W ZIM17P42844 174 aa3.44□□□□□ -1.86
UBC9YDL064W RRT5P43607 289 aa3.44□□□□□ -1.86
UBC9YDL064W COS5P47187 383 aa3.44□□□□□ -1.86
UBC9YDL064W YDL186WP48568 277 aa3.44□□□□□ -1.86
UBC9YDL064W NCS2P53923 493 aaPredicted RBP3.44□□□□□ -1.86
UBC9YDL064W KAP120Q02932 1032 aa3.44□□□□□ -1.86
UBC9YDL064W PIR3Q03180 325 aa3.44□□□□□ -1.86
UBC9YDL064W HSP31Q04432 237 aa3.44□□□□□ -1.86
UBC9YDL064W AIM32Q04689 311 aa3.44□□□□□ -1.86
UBC9YDL064W RRP45Q05636 305 aaKnown RBP3.44□□□□□ -1.86
UBC9YDL064W COS7Q07788 383 aa3.44□□□□□ -1.86
UBC9YDL064W VAM3Q12241 283 aa3.44□□□□□ -1.86
UBC9YDL064W YBR298C-AQ8TGK4 73 aa3.44□□□□□ -1.86
UBC9YDL064W CHS1P08004 1131 aa3.43□□□□□ -1.86
UBC9YDL064W HOM3P10869 527 aa3.43□□□□□ -1.86
UBC9YDL064W CLC1P17891 233 aa3.43□□□□□ -1.86
UBC9YDL064W CLB1P24868 471 aa3.43□□□□□ -1.86
UBC9YDL064W BEM1P29366 551 aa3.43□□□□□ -1.86
UBC9YDL064W SIN4P32259 974 aa3.43□□□□□ -1.86
UBC9YDL064W DBF4P32325 704 aa3.43□□□□□ -1.86
UBC9YDL064W VMA8P32610 256 aaKnown RBP3.43□□□□□ -1.86
UBC9YDL064W GYP6P32806 458 aa3.43□□□□□ -1.86
UBC9YDL064W ARA1P38115 344 aa3.43□□□□□ -1.86
UBC9YDL064W TCB2P48231 1178 aa3.43□□□□□ -1.86
UBC9YDL064W RMT2Q03305 412 aa3.43□□□□□ -1.86
UBC9YDL064W CYB2P00175 591 aa3.42□□□□□ -1.86
UBC9YDL064W ATR1P13090 542 aa3.42□□□□□ -1.86
UBC9YDL064W RPI1P23250 407 aaKnown RBP3.42□□□□□ -1.86
UBC9YDL064W RHB1P25378 209 aa3.42□□□□□ -1.86
UBC9YDL064W PUT3P25502 979 aaPredicted RBP3.42□□□□□ -1.86
UBC9YDL064W NDI1P32340 513 aa3.42□□□□□ -1.86
UBC9YDL064W ECM25P32525 599 aa3.42□□□□□ -1.86
UBC9YDL064W NTC20P38302 140 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms