RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C VOA1P53262 265 aa5.51□□□□□ -1.53
PDB1YBR221C ZPR1P53303 486 aaKnown RBP5.51□□□□□ -1.53
PDB1YBR221C DIP5P53388 608 aa5.51□□□□□ -1.53
PDB1YBR221C SSU72P53538 206 aaPredicted RBP5.51□□□□□ -1.53
PDB1YBR221C SKO1Q02100 647 aa5.51□□□□□ -1.53
PDB1YBR221C LEE1Q02799 301 aaKnown RBP5.51□□□□□ -1.53
PDB1YBR221C ACL4Q03771 387 aa5.51□□□□□ -1.53
PDB1YBR221C STE23Q06010 1027 aa5.51□□□□□ -1.53
PDB1YBR221C SOG2Q08817 791 aa5.51□□□□□ -1.53
PDB1YBR221C BTS1Q12051 335 aa5.51□□□□□ -1.53
PDB1YBR221C YOR022CQ12204 715 aa5.51□□□□□ -1.53
PDB1YBR221C SVS1Q12254 260 aa5.51□□□□□ -1.53
PDB1YBR221C DCP1Q12517 231 aaPredicted RBP5.51□□□□□ -1.53
PDB1YBR221C SCH9P11792 824 aaKnown RBP5.5□□□□□ -1.53
PDB1YBR221C HMG2P12684 1045 aa5.5□□□□□ -1.53
PDB1YBR221C PEP5P12868 1029 aa5.5□□□□□ -1.53
PDB1YBR221C KIN2P13186 1147 aaKnown RBP5.5□□□□□ -1.53
PDB1YBR221C SPO7P18410 259 aa5.5□□□□□ -1.53
PDB1YBR221C SEC62P21825 274 aa5.5□□□□□ -1.53
PDB1YBR221C CMK2P22517 447 aa5.5□□□□□ -1.53
PDB1YBR221C IDH2P28241 369 aaKnown RBP5.5□□□□□ -1.53
PDB1YBR221C TPS2P31688 896 aaKnown RBP5.5□□□□□ -1.53
PDB1YBR221C AIM29P36154 155 aa5.5□□□□□ -1.53
PDB1YBR221C AGP2P38090 596 aa5.5□□□□□ -1.53
PDB1YBR221C RPN3P40016 523 aaKnown RBP5.5□□□□□ -1.53
PDB1YBR221C PCL6P40038 420 aa5.5□□□□□ -1.53
PDB1YBR221C CEP3P40969 608 aa5.5□□□□□ -1.53
PDB1YBR221C YJL045WP47052 634 aa5.5□□□□□ -1.53
PDB1YBR221C TMA22P47089 198 aaPredicted RBP5.5□□□□□ -1.53
PDB1YBR221C KAP114P53067 1004 aa5.5□□□□□ -1.53
PDB1YBR221C CUS2P53830 285 aaPredicted RBP5.5□□□□□ -1.53
PDB1YBR221C RNT1Q02555 471 aa5.5□□□□□ -1.53
PDB1YBR221C INA17Q02888 182 aa5.5□□□□□ -1.53
PDB1YBR221C TRS31Q03337 283 aa5.5□□□□□ -1.53
PDB1YBR221C YMR226CQ05016 267 aaKnown RBP5.5□□□□□ -1.53
PDB1YBR221C RDR1Q08904 546 aa5.5□□□□□ -1.53
PDB1YBR221C FRE3Q08905 711 aa5.5□□□□□ -1.53
PDB1YBR221C MED2Q12124 431 aa5.5□□□□□ -1.53
PDB1YBR221C FMP16Q12497 93 aa5.5□□□□□ -1.53
PDB1YBR221C MTR10Q99189 972 aa5.5□□□□□ -1.53
PDB1YBR221C NHP6BP11633 99 aaKnown RBP5.49□□□□□ -1.53
PDB1YBR221C COQ1P18900 473 aa5.49□□□□□ -1.53
PDB1YBR221C ATP7P30902 174 aa5.49□□□□□ -1.53
PDB1YBR221C RAD24P32641 659 aa5.49□□□□□ -1.53
PDB1YBR221C WBP1P33767 430 aaKnown RBP5.49□□□□□ -1.53
PDB1YBR221C CIN1P40987 1014 aa5.49□□□□□ -1.53
PDB1YBR221C IME4P41833 600 aa5.49□□□□□ -1.53
PDB1YBR221C CTK2P46962 323 aa5.49□□□□□ -1.53
PDB1YBR221C SLX9P53251 210 aaPredicted RBP5.49□□□□□ -1.53
PDB1YBR221C DBP6P53734 629 aaKnown RBP5.49□□□□□ -1.53
PDB1YBR221C RSM24Q03976 319 aa5.49□□□□□ -1.53
PDB1YBR221C ARP10Q04549 284 aa5.49□□□□□ -1.53
PDB1YBR221C RRP45Q05636 305 aaKnown RBP5.49□□□□□ -1.53
PDB1YBR221C YLR283WQ05867 314 aa5.49□□□□□ -1.53
PDB1YBR221C NDL1Q06568 189 aa5.49□□□□□ -1.53
PDB1YBR221C AIM6Q07716 390 aa5.49□□□□□ -1.53
PDB1YBR221C BSC6Q08280 497 aa5.49□□□□□ -1.53
PDB1YBR221C YPL272CQ08984 517 aa5.49□□□□□ -1.53
PDB1YBR221C PNO1Q99216 274 aaKnown RBP5.49□□□□□ -1.53
PDB1YBR221C SOD2P00447 233 aa5.48□□□□□ -1.53
PDB1YBR221C GAL4P04386 881 aa5.48□□□□□ -1.53
PDB1YBR221C PDE2P06776 526 aa5.48□□□□□ -1.53
PDB1YBR221C KRS1P15180 591 aaKnown RBP5.48□□□□□ -1.53
PDB1YBR221C URA4P20051 364 aa5.48□□□□□ -1.53
PDB1YBR221C SAG1P20840 650 aa5.48□□□□□ -1.53
PDB1YBR221C IME1P21190 360 aa5.48□□□□□ -1.53
PDB1YBR221C ADH7P25377 361 aa5.48□□□□□ -1.53
PDB1YBR221C PBN1P25580 416 aa5.48□□□□□ -1.53
PDB1YBR221C TUL1P36096 758 aa5.48□□□□□ -1.53
PDB1YBR221C TCD2P36101 447 aaKnown RBP5.48□□□□□ -1.53
PDB1YBR221C YMR262WP38430 313 aa5.48□□□□□ -1.53
PDB1YBR221C FAD1P38913 306 aa5.48□□□□□ -1.53
PDB1YBR221C SEC72P39742 193 aaKnown RBP5.48□□□□□ -1.53
PDB1YBR221C AGE2P40529 298 aa5.48□□□□□ -1.53
PDB1YBR221C DSN1P40568 576 aa5.48□□□□□ -1.53
PDB1YBR221C MAF1P41910 395 aa5.48□□□□□ -1.53
PDB1YBR221C GCV1P48015 400 aa5.48□□□□□ -1.53
PDB1YBR221C RIB4P50861 169 aaPredicted RBP5.48□□□□□ -1.53
PDB1YBR221C PUS2P53167 370 aa5.48□□□□□ -1.53
PDB1YBR221C DIA1P54005 336 aa5.48□□□□□ -1.53
PDB1YBR221C CAB5Q03941 241 aa5.48□□□□□ -1.53
PDB1YBR221C DUS4Q06063 367 aa5.48□□□□□ -1.53
PDB1YBR221C CTS2Q06350 511 aa5.48□□□□□ -1.53
PDB1YBR221C YPR078CQ06813 372 aa5.48□□□□□ -1.53
PDB1YBR221C SNA4Q07549 140 aa5.48□□□□□ -1.53
PDB1YBR221C YDL129WQ07555 291 aa5.48□□□□□ -1.53
PDB1YBR221C YDL109CQ12103 647 aa5.48□□□□□ -1.53
PDB1YBR221C TDH2P00358 332 aaKnown RBP5.47□□□□□ -1.53
PDB1YBR221C TDH3P00359 332 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
PDB1YBR221C TRP3P00937 484 aa5.47□□□□□ -1.53
PDB1YBR221C ILV2P07342 687 aaKnown RBP5.47□□□□□ -1.53
PDB1YBR221C MSF1P08425 469 aa5.47□□□□□ -1.53
PDB1YBR221C RPL27AP0C2H6 136 aaKnown RBP5.47□□□□□ -1.53
PDB1YBR221C RPL27BP0C2H7 136 aaKnown RBP5.47□□□□□ -1.53
PDB1YBR221C SEC12P11655 471 aa5.47□□□□□ -1.53
PDB1YBR221C YCP4P25349 247 aaKnown RBP5.47□□□□□ -1.53
PDB1YBR221C MTC7P32633 139 aa5.47□□□□□ -1.53
PDB1YBR221C ATM1P40416 690 aa5.47□□□□□ -1.53
PDB1YBR221C COS5P47187 383 aa5.47□□□□□ -1.53
PDB1YBR221C STR3P53101 465 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms