RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	GIC2	Q06648	383 aa		3.98	□□□□□ -1.77
PIM1	YBL022C	THI3	Q07471	609 aa		3.98	□□□□□ -1.77
PIM1	YBL022C	ICL2	Q12031	575 aa		3.98	□□□□□ -1.77
PIM1	YBL022C	YOR283W	Q12040	230 aa	Known RBP	3.98	□□□□□ -1.77
PIM1	YBL022C	WRS1	Q12109	432 aa	Known RBP	3.98	□□□□□ -1.77
PIM1	YBL022C	BSC1	Q12140	328 aa		3.98	□□□□□ -1.77
PIM1	YBL022C	YOR022C	Q12204	715 aa		3.98	□□□□□ -1.77
PIM1	YBL022C	WTM1	Q12363	437 aa	Known RBP	3.98	□□□□□ -1.77
PIM1	YBL022C	YIL002W-A	Q3E7Z5	69 aa		3.98	□□□□□ -1.77
PIM1	YBL022C	ATP1	P07251	545 aa	Known RBP	3.97	□□□□□ -1.77
PIM1	YBL022C	NHP6B	P11633	99 aa	Known RBP	3.97	□□□□□ -1.77
PIM1	YBL022C	TCP1	P12612	559 aa	Known RBP	3.97	□□□□□ -1.77
PIM1	YBL022C	YCR101C	P25607	182 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	HEM3	P28789	327 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	CHK1	P38147	527 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	SIF2	P38262	535 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	MPM1	P40364	252 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	YIR035C	P40579	254 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	ERG10	P41338	398 aa	Known RBP	3.97	□□□□□ -1.77
PIM1	YBL022C	GPD1	Q00055	391 aa	Known RBP	3.97	□□□□□ -1.77
PIM1	YBL022C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.97	□□□□□ -1.77	not detected
PIM1	YBL022C	REC102	Q02721	264 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	YLR224W	Q05947	369 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	RAD34	Q06665	692 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	ASR1	Q06834	288 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	ULA1	Q12059	462 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	RGS2	Q99188	309 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	ISN1	Q99312	450 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	CBP6	P07253	162 aa	Predicted RBP	3.97	□□□□□ -1.77
PIM1	YBL022C	ACE2	P21192	770 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	SYP1	P25623	870 aa	Known RBP	3.97	□□□□□ -1.77
PIM1	YBL022C	FUN30	P31380	1131 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	BIG1	P38813	335 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	NDT80	P38830	627 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	SNM1	P40993	198 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	GYP8	P43570	497 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	YJR107W	P47145	328 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	YAT1	P80235	687 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	ODC1	Q03028	310 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	YMR160W	Q03823	816 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	IVY1	Q04934	453 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	ECM38	Q05902	660 aa	Predicted RBP	3.97	□□□□□ -1.77
PIM1	YBL022C	NSL1	Q12143	216 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	PNS1	Q12412	539 aa		3.97	□□□□□ -1.77
PIM1	YBL022C	CDC33	P07260	213 aa	Known RBP	3.96	□□□□□ -1.77
PIM1	YBL022C	ALG7	P07286	448 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	KAR1	P11927	433 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	FUS3	P16892	353 aa	Known RBP	3.96	□□□□□ -1.77
PIM1	YBL022C	VMA16	P23968	213 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	DAL2	P25335	343 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	BUB3	P26449	341 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	FAA1	P30624	700 aa	Known RBP	3.96	□□□□□ -1.77
PIM1	YBL022C	DBF20	P32328	564 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	PAN5	P38787	379 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	VPS45	P38932	577 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	SCC4	P40090	624 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	YIR007W	P40566	764 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	CIN1	P40987	1014 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	BNA6	P43619	295 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	SRB7	P47822	140 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	HLJ1	P48353	224 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	PYK2	P52489	506 aa	Known RBP	3.96	□□□□□ -1.77
PIM1	YBL022C	MPC1	P53157	130 aa	Known RBP	3.96	□□□□□ -1.77
PIM1	YBL022C	SPC98	P53540	846 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	CUS2	P53830	285 aa	Predicted RBP	3.96	□□□□□ -1.77
PIM1	YBL022C	AIM33	Q04516	312 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	SMA2	Q04658	369 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	PDR8	Q06149	701 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	MDM32	Q12171	622 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	RMD5	Q12508	421 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	YOR019W	Q99248	730 aa		3.96	□□□□□ -1.77
PIM1	YBL022C	SPT3	P06844	337 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	CCA1	P21269	546 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	SRO9	P25567	434 aa	Known RBP	3.96	□□□□□ -1.78
PIM1	YBL022C	EMC1	P25574	760 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	PPZ1	P26570	692 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	SFC1	P33303	322 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	GSM1	P42950	618 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	NUP85	P46673	744 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	YML6	P51998	286 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	TIM8	P57744	87 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	SVL3	Q03088	825 aa	Known RBP	3.96	□□□□□ -1.78
PIM1	YBL022C	YDR090C	Q03193	310 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	SLD5	Q03406	294 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	PLB2	Q03674	706 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	PLM2	Q04383	521 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	JIP5	Q06214	492 aa	Predicted RBP	3.96	□□□□□ -1.78
PIM1	YBL022C	DIB1	Q06819	143 aa	Predicted RBP	3.96	□□□□□ -1.78
PIM1	YBL022C	YDL121C	Q07541	149 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	FEX2	Q08991	375 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	GIS3	Q12418	502 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	LAT1	P12695	482 aa	Known RBP	3.96	□□□□□ -1.78
PIM1	YBL022C	HPR1	P17629	752 aa	Known RBP	3.96	□□□□□ -1.78
PIM1	YBL022C	YPK2	P18961	677 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	RAM1	P22007	431 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	ATP7	P30902	174 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	MRS6	P32864	603 aa	Known RBP	3.96	□□□□□ -1.78
PIM1	YBL022C	CSG2	P35206	410 aa		3.96	□□□□□ -1.78
PIM1	YBL022C	YPT52	P36018	234 aa	Known RBP	3.96	□□□□□ -1.78
PIM1	YBL022C	OCA5	P38738	679 aa		3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms