RNA–Protein interactions for RNA: YBL004W

UTP20, Transcript of Component of the small-subunit (SSU) processome, yeastyeast

Gene UTP20, Length 7,482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UTP20YBL004W TIM10P87108 93 aa0.66□□□□□ -2.3
UTP20YBL004W RAD30Q04049 632 aa0.66□□□□□ -2.3
UTP20YBL004W RDR1Q08904 546 aa0.66□□□□□ -2.3
UTP20YBL004W MDM32Q12171 622 aa0.66□□□□□ -2.3
UTP20YBL004W YLL054CQ12244 843 aa0.66□□□□□ -2.3
UTP20YBL004W MED1Q12321 566 aa0.66□□□□□ -2.3
UTP20YBL004W SCH9P11792 824 aaKnown RBP0.66□□□□□ -2.3
UTP20YBL004W MET8P15807 274 aa0.66□□□□□ -2.3
UTP20YBL004W RER2P35196 286 aa0.66□□□□□ -2.3
UTP20YBL004W PCM1P38628 557 aaKnown RBP0.66□□□□□ -2.3
UTP20YBL004W CCT5P40413 562 aaKnown RBP0.66□□□□□ -2.3
UTP20YBL004W APS3P47064 194 aa0.66□□□□□ -2.3
UTP20YBL004W SMA2Q04658 369 aa0.66□□□□□ -2.3
UTP20YBL004W SUE1Q06524 206 aa0.66□□□□□ -2.3
UTP20YBL004W YER152CP10356 443 aa0.65□□□□□ -2.3
UTP20YBL004W YEF1P32622 495 aa0.65□□□□□ -2.3
UTP20YBL004W DHR2P36009 735 aaPredicted RBP0.65□□□□□ -2.3
UTP20YBL004W TAE1P38340 232 aa0.65□□□□□ -2.3
UTP20YBL004W PSD1P39006 500 aa0.65□□□□□ -2.3
UTP20YBL004W ZRG8P40021 1076 aa0.65□□□□□ -2.3
UTP20YBL004W MND2P40577 368 aa0.65□□□□□ -2.3
UTP20YBL004W STB2P46679 850 aa0.65□□□□□ -2.3
UTP20YBL004W LSC2P53312 427 aa0.65□□□□□ -2.3
UTP20YBL004W HST2P53686 357 aa0.65□□□□□ -2.3
UTP20YBL004W ENT5Q03769 411 aaKnown RBP0.65□□□□□ -2.3
UTP20YBL004W CAC2Q04199 468 aa0.65□□□□□ -2.3
UTP20YBL004W TAF9Q05027 157 aa0.65□□□□□ -2.3
UTP20YBL004W RPL6BP05739 176 aaKnown RBP0.65□□□□□ -2.3
UTP20YBL004W PPR1P07272 904 aaPredicted RBP0.65□□□□□ -2.3
UTP20YBL004W ARG1P22768 420 aa0.65□□□□□ -2.3
UTP20YBL004W CLB1P24868 471 aa0.65□□□□□ -2.3
UTP20YBL004W MIG1P27705 504 aa0.65□□□□□ -2.3
UTP20YBL004W ERG9P29704 444 aa0.65□□□□□ -2.3
UTP20YBL004W MLF3P32047 452 aa0.65□□□□□ -2.3
UTP20YBL004W ECM34P38728 170 aa0.65□□□□□ -2.3
UTP20YBL004W SSN3P39073 555 aa0.65□□□□□ -2.3
UTP20YBL004W ERP2P39704 215 aa0.65□□□□□ -2.3
UTP20YBL004W MET18P40469 1032 aa0.65□□□□□ -2.3
UTP20YBL004W IRC5P43610 853 aa0.65□□□□□ -2.3
UTP20YBL004W TRS120Q04183 1289 aa0.65□□□□□ -2.3
UTP20YBL004W CYK3Q07533 885 aa0.65□□□□□ -2.3
UTP20YBL004W ATG10Q07879 167 aa0.65□□□□□ -2.3
UTP20YBL004W MUM3Q08750 479 aa0.65□□□□□ -2.3
UTP20YBL004W MRPL23Q12487 163 aaPredicted RBP0.65□□□□□ -2.3
UTP20YBL004W TOA1P32773 286 aa0.65□□□□□ -2.31
UTP20YBL004W TPO5P36029 618 aa0.65□□□□□ -2.31
UTP20YBL004W THI2P38141 450 aa0.65□□□□□ -2.31
UTP20YBL004W CCZ1P38273 704 aa0.65□□□□□ -2.31
UTP20YBL004W YIL029CP40538 142 aa0.65□□□□□ -2.31
UTP20YBL004W SNX41Q04053 625 aa0.65□□□□□ -2.31
UTP20YBL004W PMA2P19657 947 aa0.65□□□□□ -2.31
UTP20YBL004W CDC3P32457 520 aaKnown RBP0.65□□□□□ -2.31
UTP20YBL004W GIM4P40005 111 aaKnown RBP0.65□□□□□ -2.31
UTP20YBL004W ELO3P40319 345 aa0.65□□□□□ -2.31
UTP20YBL004W MNN11P46985 422 aaKnown RBP0.65□□□□□ -2.31
UTP20YBL004W MKC7P53379 596 aa0.65□□□□□ -2.31
UTP20YBL004W COS1P53822 381 aa0.65□□□□□ -2.31
UTP20YBL004W PPM1Q04081 328 aa0.65□□□□□ -2.31
UTP20YBL004W PEX10Q05568 337 aa0.65□□□□□ -2.31
UTP20YBL004W BUR2Q05949 395 aa0.65□□□□□ -2.31
UTP20YBL004W BAG7Q12128 409 aa0.65□□□□□ -2.31
UTP20YBL004W RUP1Q12242 671 aa0.65□□□□□ -2.31
UTP20YBL004W ATP2P00830 511 aaKnown RBP0.65□□□□□ -2.31
UTP20YBL004W RAD10P06838 210 aa0.65□□□□□ -2.31
UTP20YBL004W MCM1P11746 286 aa0.65□□□□□ -2.31
UTP20YBL004W GFD2P25370 566 aaKnown RBP0.65□□□□□ -2.31
UTP20YBL004W PRR1P28708 518 aa0.65□□□□□ -2.31
UTP20YBL004W KTR3P38130 404 aaPredicted RBP0.65□□□□□ -2.31
UTP20YBL004W ROG1P53118 685 aa0.65□□□□□ -2.31
UTP20YBL004W HOP2P53187 214 aa0.65□□□□□ -2.31
UTP20YBL004W DAM1P53267 343 aa0.65□□□□□ -2.31
UTP20YBL004W YDR249CQ03787 373 aa0.65□□□□□ -2.31
UTP20YBL004W SVF1Q05515 481 aa0.65□□□□□ -2.31
UTP20YBL004W YBP1P38315 674 aa0.65□□□□□ -2.31
UTP20YBL004W HOS4P40480 1083 aa0.65□□□□□ -2.31
UTP20YBL004W HXT10P43581 546 aa0.65□□□□□ -2.31
UTP20YBL004W DSE4P53753 1117 aa0.65□□□□□ -2.31
UTP20YBL004W RLI1Q03195 608 aaKnown RBP0.65□□□□□ -2.31
UTP20YBL004W YDR391CQ04170 232 aa0.65□□□□□ -2.31
UTP20YBL004W ARR2Q06597 130 aa0.65□□□□□ -2.31
UTP20YBL004W PRP11Q07350 266 aaPredicted RBP0.65□□□□□ -2.31
UTP20YBL004W YOR378WQ08902 515 aa0.65□□□□□ -2.31
UTP20YBL004W MET32Q12041 191 aa0.65□□□□□ -2.31
UTP20YBL004W MHF1Q3E835 90 aa0.65□□□□□ -2.31
UTP20YBL004W TDH2P00358 332 aaKnown RBP0.64□□□□□ -2.31
UTP20YBL004W TDH1P00360 332 aaKnown RBP0.64□□□□□ -2.31
UTP20YBL004W MET22P32179 357 aa0.64□□□□□ -2.31
UTP20YBL004W SWD2P36104 329 aaPredicted RBP0.64□□□□□ -2.31
UTP20YBL004W LYS1P38998 373 aaRIP-Chip data0.64□□□□□ -2.31not detected
UTP20YBL004W PHB1P40961 287 aa0.64□□□□□ -2.31
UTP20YBL004W MRPL13Q02204 264 aa0.64□□□□□ -2.31
UTP20YBL004W HAP5Q02516 242 aa0.64□□□□□ -2.31
UTP20YBL004W UGO1Q03327 502 aa0.64□□□□□ -2.31
UTP20YBL004W TY1A-DR3Q12441 440 aa0.64□□□□□ -2.31
UTP20YBL004W YJL197C-AP0C5P0 93 aa0.64□□□□□ -2.31
UTP20YBL004W YML003WP0CF16 290 aa0.64□□□□□ -2.31
UTP20YBL004W ARE1P25628 610 aa0.64□□□□□ -2.31
UTP20YBL004W OCH1P31755 480 aa0.64□□□□□ -2.31
UTP20YBL004W PRO1P32264 428 aa0.64□□□□□ -2.31
UTP20YBL004W MKS1P34072 584 aa0.64□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms