RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 SEPT4O43236 478 aa21.86■■□□□ 1.09
DDX39A-214ENST00000590556 SREBF1P36956 1147 aa21.86■■□□□ 1.09
DDX39A-214ENST00000590556 CCDC144BQ3MJ40 725 aa21.86■■□□□ 1.09
DDX39A-214ENST00000590556 TAPT1Q6NXT6 567 aa21.86■■□□□ 1.09
DDX39A-214ENST00000590556 SEPT14Q6ZU15 432 aa21.86■■□□□ 1.09
DDX39A-214ENST00000590556 KRT25Q7Z3Z0 450 aa21.86■■□□□ 1.09
DDX39A-214ENST00000590556 ZFP91Q96JP5 570 aaPredicted RBP21.86■■□□□ 1.09
DDX39A-214ENST00000590556 PDGFCQ9NRA1 345 aa21.86■■□□□ 1.09
DDX39A-214ENST00000590556 STAM2O75886 525 aa21.85■■□□□ 1.09
DDX39A-214ENST00000590556 AKR1A1P14550 325 aa21.85■■□□□ 1.09
DDX39A-214ENST00000590556 MRPS9P82933 396 aaKnown RBP21.85■■□□□ 1.09
DDX39A-214ENST00000590556 ARHGAP4P98171 946 aa21.85■■□□□ 1.09
DDX39A-214ENST00000590556 BECN1Q14457 450 aa21.85■■□□□ 1.09
DDX39A-214ENST00000590556 IQSEC1Q6DN90 963 aa21.85■■□□□ 1.09
DDX39A-214ENST00000590556 DIS3L2Q8IYB7 885 aaKnown RBP21.85■■□□□ 1.09
DDX39A-214ENST00000590556 TMEM106CQ9BVX2 250 aa21.85■■□□□ 1.09
DDX39A-214ENST00000590556 PAK6Q9NQU5 681 aaPredicted RBP21.85■■□□□ 1.09
DDX39A-214ENST00000590556 RTEL1Q9NZ71 1219 aa21.85■■□□□ 1.09
DDX39A-214ENST00000590556 DDX20Q9UHI6 824 aaKnown RBP21.85■■□□□ 1.09
DDX39A-214ENST00000590556 CCDC194A0A1B0GVG4 234 aa21.84■■□□□ 1.09
DDX39A-214ENST00000590556 RBM47A0AV96 593 aaKnown RBP21.84■■□□□ 1.09
DDX39A-214ENST00000590556 BTBD18B2RXH4 712 aa21.84■■□□□ 1.09
DDX39A-214ENST00000590556 MSCO60682 206 aa21.84■■□□□ 1.09
DDX39A-214ENST00000590556 ADCYAP1R1P41586 468 aa21.84■■□□□ 1.09
DDX39A-214ENST00000590556 NONOQ15233 471 aaKnown RBP eCLIP21.84■■□□□ 1.09
DDX39A-214ENST00000590556 LARP1BQ659C4 914 aaKnown RBP21.84■■□□□ 1.09
DDX39A-214ENST00000590556 SCFD2Q8WU76 684 aa21.84■■□□□ 1.09
DDX39A-214ENST00000590556 DEFB118Q96PH6 123 aa21.84■■□□□ 1.09
DDX39A-214ENST00000590556 KIAA1217Q5T5P2 1943 aa21.84■■□□□ 1.09
DDX39A-214ENST00000590556 MYH7BA7E2Y1 1941 aa21.83■■□□□ 1.09
DDX39A-214ENST00000590556 H3BQV1 296 aa21.83■■□□□ 1.09
DDX39A-214ENST00000590556 GJB1P08034 283 aa21.83■■□□□ 1.09
DDX39A-214ENST00000590556 ZNF76P36508 570 aa21.83■■□□□ 1.09
DDX39A-214ENST00000590556 TNFAIP2Q03169 654 aa21.83■■□□□ 1.09
DDX39A-214ENST00000590556 NR5A1Q13285 461 aa21.83■■□□□ 1.09
DDX39A-214ENST00000590556 IFFO2Q5TF58 517 aa21.83■■□□□ 1.09
DDX39A-214ENST00000590556 WDR11Q9BZH6 1224 aa21.83■■□□□ 1.09
DDX39A-214ENST00000590556 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.82■■□□□ 1.08
DDX39A-214ENST00000590556 RGS20O76081 388 aa21.82■■□□□ 1.08
DDX39A-214ENST00000590556 CYP3A4P08684 503 aa21.82■■□□□ 1.08
DDX39A-214ENST00000590556 RARBP10826 455 aa21.82■■□□□ 1.08
DDX39A-214ENST00000590556 PDCP20941 246 aa21.82■■□□□ 1.08
DDX39A-214ENST00000590556 GNL2Q13823 731 aaKnown RBP21.82■■□□□ 1.08
DDX39A-214ENST00000590556 TTLL4Q14679 1199 aa21.82■■□□□ 1.08
DDX39A-214ENST00000590556 GNPTABQ3T906 1256 aa21.82■■□□□ 1.08
DDX39A-214ENST00000590556 ANO1Q5XXA6 986 aa21.82■■□□□ 1.08
DDX39A-214ENST00000590556 PIK3AP1Q6ZUJ8 805 aa21.82■■□□□ 1.08
DDX39A-214ENST00000590556 NLRX1Q86UT6 975 aa21.82■■□□□ 1.08
DDX39A-214ENST00000590556 TBCKQ8TEA7 893 aa21.82■■□□□ 1.08
DDX39A-214ENST00000590556 CRYGNQ8WXF5 182 aa21.82■■□□□ 1.08
DDX39A-214ENST00000590556 TNFRSF25Q93038 417 aa21.82■■□□□ 1.08
DDX39A-214ENST00000590556 INPP4AQ96PE3 977 aaPredicted RBP21.82■■□□□ 1.08
DDX39A-214ENST00000590556 KIAA0100Q14667 2235 aaKnown RBP21.82■■□□□ 1.08
DDX39A-214ENST00000590556 CENPFP49454 3210 aa21.81■■□□□ 1.08
DDX39A-214ENST00000590556 TXNP10599 105 aaKnown RBP21.81■■□□□ 1.08
DDX39A-214ENST00000590556 SMPD1P17405 629 aa21.81■■□□□ 1.08
DDX39A-214ENST00000590556 USP11P51784 963 aa21.81■■□□□ 1.08
DDX39A-214ENST00000590556 LHX8Q68G74 356 aa21.81■■□□□ 1.08
DDX39A-214ENST00000590556 KCNV1Q6PIU1 500 aa21.81■■□□□ 1.08
DDX39A-214ENST00000590556 SPRYD3Q8NCJ5 442 aa21.81■■□□□ 1.08
DDX39A-214ENST00000590556 LENG1Q96BZ8 264 aaPredicted RBP21.81■■□□□ 1.08
DDX39A-214ENST00000590556 FOXP1Q9H334 677 aaPredicted RBP21.81■■□□□ 1.08
DDX39A-214ENST00000590556 UBIAD1Q9Y5Z9 338 aa21.81■■□□□ 1.08
DDX39A-214ENST00000590556 MRVI1Q9Y6F6 885 aa21.81■■□□□ 1.08
DDX39A-214ENST00000590556 CCDC85CA6NKD9 419 aa21.8■■□□□ 1.08
DDX39A-214ENST00000590556 ADCY6O43306 1168 aa21.8■■□□□ 1.08
DDX39A-214ENST00000590556 ITGB5P18084 799 aa21.8■■□□□ 1.08
DDX39A-214ENST00000590556 INF2Q27J81 1249 aa21.8■■□□□ 1.08
DDX39A-214ENST00000590556 DUSP28Q4G0W2 176 aa21.8■■□□□ 1.08
DDX39A-214ENST00000590556 CEP55Q53EZ4 464 aa21.8■■□□□ 1.08
DDX39A-214ENST00000590556 U2AF1L4Q8WU68 220 aaKnown RBP21.8■■□□□ 1.08
DDX39A-214ENST00000590556 MXRA8Q9BRK3 442 aa21.8■■□□□ 1.08
DDX39A-214ENST00000590556 SPATA31C2B4DYI2 1134 aa21.79■■□□□ 1.08
DDX39A-214ENST00000590556 FIBPO43427 364 aa21.79■■□□□ 1.08
DDX39A-214ENST00000590556 DUSP11O75319 330 aaKnown RBP21.79■■□□□ 1.08
DDX39A-214ENST00000590556 SGPL1O95470 568 aa21.79■■□□□ 1.08
DDX39A-214ENST00000590556 TFRCP02786 760 aaKnown RBP21.79■■□□□ 1.08
DDX39A-214ENST00000590556 TGFB3P10600 412 aa21.79■■□□□ 1.08
DDX39A-214ENST00000590556 ICAM3P32942 547 aa21.79■■□□□ 1.08
DDX39A-214ENST00000590556 EARS2Q5JPH6 523 aaKnown RBP21.79■■□□□ 1.08
DDX39A-214ENST00000590556 TMEM63BQ5T3F8 832 aa21.79■■□□□ 1.08
DDX39A-214ENST00000590556 MCTP1Q6DN14 999 aa21.79■■□□□ 1.08
DDX39A-214ENST00000590556 CCDC62Q6P9F0 684 aa21.79■■□□□ 1.08
DDX39A-214ENST00000590556 CYP2W1Q8TAV3 490 aa21.79■■□□□ 1.08
DDX39A-214ENST00000590556 GPRASP2Q96D09 838 aa21.79■■□□□ 1.08
DDX39A-214ENST00000590556 CDHR1Q96JP9 859 aa21.79■■□□□ 1.08
DDX39A-214ENST00000590556 JADE2Q9NQC1 790 aa21.79■■□□□ 1.08
DDX39A-214ENST00000590556 XPNPEP3Q9NQH7 507 aa21.79■■□□□ 1.08
DDX39A-214ENST00000590556 DDX41Q9UJV9 622 aaKnown RBP21.79■■□□□ 1.08
DDX39A-214ENST00000590556 FAM205CA6NFA0 338 aa21.78■■□□□ 1.08
DDX39A-214ENST00000590556 MEIS1O00470 390 aa21.78■■□□□ 1.08
DDX39A-214ENST00000590556 NKRFO15226 690 aaKnown RBP eCLIP21.78■■□□□ 1.08
DDX39A-214ENST00000590556 ARIH2O95376 493 aa21.78■■□□□ 1.08
DDX39A-214ENST00000590556 CIITAP33076 1130 aa21.78■■□□□ 1.08
DDX39A-214ENST00000590556 GJA8P48165 433 aa21.78■■□□□ 1.08
DDX39A-214ENST00000590556 MTMR1Q13613 665 aa21.78■■□□□ 1.08
DDX39A-214ENST00000590556 LY6KQ17RY6 165 aa21.78■■□□□ 1.08
DDX39A-214ENST00000590556 GJC2Q5T442 439 aaPredicted RBP21.78■■□□□ 1.08
DDX39A-214ENST00000590556 NIPA1Q7RTP0 329 aa21.78■■□□□ 1.08
DDX39A-214ENST00000590556 NEK8Q86SG6 692 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms