RNA–Protein interactions for RNA: ENST00000575934.5

ABR-233, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-233ENST00000575934 HOMER1Q86YM7 354 aa23.72■■□□□ 1.39
ABR-233ENST00000575934 RPUSD2Q8IZ73 545 aaKnown RBP23.72■■□□□ 1.39
ABR-233ENST00000575934 MAFAQ8NHW3 353 aaPredicted RBP23.72■■□□□ 1.39
ABR-233ENST00000575934 IGDCC4Q8TDY8 1250 aa23.72■■□□□ 1.39
ABR-233ENST00000575934 PIGSQ96S52 555 aa23.72■■□□□ 1.39
ABR-233ENST00000575934 PDCD2LQ9BRP1 358 aa23.72■■□□□ 1.39
ABR-233ENST00000575934 ZNF576Q9H609 170 aa23.72■■□□□ 1.39
ABR-233ENST00000575934 DDX41Q9UJV9 622 aaKnown RBP23.72■■□□□ 1.39
ABR-233ENST00000575934 FOSL2P15408 326 aa23.71■■□□□ 1.39
ABR-233ENST00000575934 TRAF1Q13077 416 aa23.71■■□□□ 1.39
ABR-233ENST00000575934 GRIN2CQ14957 1233 aa23.71■■□□□ 1.39
ABR-233ENST00000575934 TMEM67Q5HYA8 995 aa23.71■■□□□ 1.39
ABR-233ENST00000575934 OTOP2Q7RTS6 562 aa23.71■■□□□ 1.39
ABR-233ENST00000575934 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.71■■□□□ 1.39
ABR-233ENST00000575934 PPP1R13LQ8WUF5 828 aa23.71■■□□□ 1.39
ABR-233ENST00000575934 PFKMP08237 780 aa23.7■■□□□ 1.38
ABR-233ENST00000575934 EMID1Q96A84 441 aaPredicted RBP23.7■■□□□ 1.38
ABR-233ENST00000575934 DOCK5Q9H7D0 1870 aa23.69■■□□□ 1.38
ABR-233ENST00000575934 PNMA6FA0A0J9YX94 578 aa23.69■■□□□ 1.38
ABR-233ENST00000575934 RGS20O76081 388 aa23.69■■□□□ 1.38
ABR-233ENST00000575934 HOXA13P31271 388 aaPredicted RBP23.69■■□□□ 1.38
ABR-233ENST00000575934 PGM5Q15124 567 aa23.69■■□□□ 1.38
ABR-233ENST00000575934 CATIPQ7Z7H3 387 aa23.69■■□□□ 1.38
ABR-233ENST00000575934 SESTD1Q86VW0 696 aa23.69■■□□□ 1.38
ABR-233ENST00000575934 KAT2BQ92831 832 aa23.69■■□□□ 1.38
ABR-233ENST00000575934 MTA3Q9BTC8 594 aa23.69■■□□□ 1.38
ABR-233ENST00000575934 LSG1Q9H089 658 aaKnown RBP23.69■■□□□ 1.38
ABR-233ENST00000575934 MRVI1Q9Y6F6 885 aa23.69■■□□□ 1.38
ABR-233ENST00000575934 PRUNE2Q8WUY3 3088 aa23.69■■□□□ 1.38
ABR-233ENST00000575934 PITPNM1O00562 1244 aa23.68■■□□□ 1.38
ABR-233ENST00000575934 CASTP20810 708 aaKnown RBP23.68■■□□□ 1.38
ABR-233ENST00000575934 RAB30Q15771 203 aa23.68■■□□□ 1.38
ABR-233ENST00000575934 VSIG10LQ86VR7 867 aa23.68■■□□□ 1.38
ABR-233ENST00000575934 MAP3K14Q99558 947 aa23.68■■□□□ 1.38
ABR-233ENST00000575934 LY9Q9HBG7 655 aa23.68■■□□□ 1.38
ABR-233ENST00000575934 GCOM1H8Y6P7 765 aaPredicted RBP23.67■■□□□ 1.38
ABR-233ENST00000575934 POLR2MP0CAP2 368 aa23.67■■□□□ 1.38
ABR-233ENST00000575934 DGKDQ16760 1214 aa23.67■■□□□ 1.38
ABR-233ENST00000575934 IL31RAQ8NI17 732 aa23.67■■□□□ 1.38
ABR-233ENST00000575934 ESYT1Q9BSJ8 1104 aa23.67■■□□□ 1.38
ABR-233ENST00000575934 PTPRSQ13332 1948 aa23.67■■□□□ 1.38
ABR-233ENST00000575934 DDAH1O94760 285 aa23.66■■□□□ 1.38
ABR-233ENST00000575934 MYCLP12524 364 aaPredicted RBP23.66■■□□□ 1.38
ABR-233ENST00000575934 HOXD8P13378 290 aaPredicted RBP23.66■■□□□ 1.38
ABR-233ENST00000575934 RFC2P35250 354 aa23.66■■□□□ 1.38
ABR-233ENST00000575934 LAMC2Q13753 1193 aa23.66■■□□□ 1.38
ABR-233ENST00000575934 KCNV1Q6PIU1 500 aa23.66■■□□□ 1.38
ABR-233ENST00000575934 ZNF654Q8IZM8 581 aa23.66■■□□□ 1.38
ABR-233ENST00000575934 PPTC7Q8NI37 304 aa23.66■■□□□ 1.38
ABR-233ENST00000575934 CTAGE1Q96RT6 745 aa23.66■■□□□ 1.38
ABR-233ENST00000575934 MSRAQ9UJ68 235 aa23.66■■□□□ 1.38
ABR-233ENST00000575934 CHD9Q3L8U1 2897 aa23.66■■□□□ 1.38
ABR-233ENST00000575934 IQCF3P0C7M6 154 aa23.65■■□□□ 1.38
ABR-233ENST00000575934 BFSP2Q13515 415 aa23.65■■□□□ 1.38
ABR-233ENST00000575934 PTGISQ16647 500 aa23.65■■□□□ 1.38
ABR-233ENST00000575934 GDF6Q6KF10 455 aaPredicted RBP23.65■■□□□ 1.38
ABR-233ENST00000575934 DHX37Q8IY37 1157 aaKnown RBP23.65■■□□□ 1.38
ABR-233ENST00000575934 SPZ1Q9BXG8 430 aa23.65■■□□□ 1.38
ABR-233ENST00000575934 NOD1Q9Y239 953 aa23.65■■□□□ 1.38
ABR-233ENST00000575934 YBX2Q9Y2T7 364 aaKnown RBP23.65■■□□□ 1.38
ABR-233ENST00000575934 SLC4A7Q9Y6M7 1214 aa23.65■■□□□ 1.38
ABR-233ENST00000575934 FRMPD4Q14CM0 1322 aa23.64■■□□□ 1.38
ABR-233ENST00000575934 PRC1O43663 620 aa23.64■■□□□ 1.37
ABR-233ENST00000575934 F2P00734 622 aa23.64■■□□□ 1.37
ABR-233ENST00000575934 CHMP4BP1P59074 171 aa23.64■■□□□ 1.37
ABR-233ENST00000575934 CASC1Q6TDU7 716 aa23.64■■□□□ 1.37
ABR-233ENST00000575934 DEFB128Q7Z7B8 93 aa23.64■■□□□ 1.37
ABR-233ENST00000575934 FCHSD1Q86WN1 690 aa23.64■■□□□ 1.37
ABR-233ENST00000575934 RETREG2Q8NC44 543 aa23.64■■□□□ 1.37
ABR-233ENST00000575934 CTCFLQ8NI51 663 aaPredicted RBP23.64■■□□□ 1.37
ABR-233ENST00000575934 MYL10Q9BUA6 226 aa23.64■■□□□ 1.37
ABR-233ENST00000575934 KATNAL1Q9BW62 490 aa23.64■■□□□ 1.37
ABR-233ENST00000575934 HAS3O00219 553 aa23.63■■□□□ 1.37
ABR-233ENST00000575934 SH2B2O14492 632 aaPredicted RBP23.63■■□□□ 1.37
ABR-233ENST00000575934 SLC27A2O14975 620 aa23.63■■□□□ 1.37
ABR-233ENST00000575934 SMARCA1P28370 1054 aa23.63■■□□□ 1.37
ABR-233ENST00000575934 CCND2P30279 289 aa23.63■■□□□ 1.37
ABR-233ENST00000575934 MCM5P33992 734 aa23.63■■□□□ 1.37
ABR-233ENST00000575934 NECTIN1Q15223 517 aa23.63■■□□□ 1.37
ABR-233ENST00000575934 CELF3Q5SZQ8 465 aaKnown RBP23.63■■□□□ 1.37
ABR-233ENST00000575934 MYSM1Q5VVJ2 828 aa23.63■■□□□ 1.37
ABR-233ENST00000575934 CAGE1Q8TC20 777 aa23.63■■□□□ 1.37
ABR-233ENST00000575934 TMEM87BQ96K49 555 aa23.63■■□□□ 1.37
ABR-233ENST00000575934 NKX2-4Q9H2Z4 354 aa23.63■■□□□ 1.37
ABR-233ENST00000575934 GTF2IRD1Q9UHL9 959 aa23.63■■□□□ 1.37
ABR-233ENST00000575934 ZBBXA8MT70 800 aa23.62■■□□□ 1.37
ABR-233ENST00000575934 ZNF286BP0CG31 522 aa23.62■■□□□ 1.37
ABR-233ENST00000575934 TGFB3P10600 412 aa23.62■■□□□ 1.37
ABR-233ENST00000575934 UBA1P22314 1058 aaKnown RBP23.62■■□□□ 1.37
ABR-233ENST00000575934 KIF5BP33176 963 aa23.62■■□□□ 1.37
ABR-233ENST00000575934 PSEN2P49810 448 aa23.62■■□□□ 1.37
ABR-233ENST00000575934 SP2Q02086 613 aa23.62■■□□□ 1.37
ABR-233ENST00000575934 COL9A3Q14050 684 aaPredicted RBP23.62■■□□□ 1.37
ABR-233ENST00000575934 TMTC2Q8N394 836 aa23.62■■□□□ 1.37
ABR-233ENST00000575934 CCDC155Q8N6L0 562 aa23.62■■□□□ 1.37
ABR-233ENST00000575934 HDAC6Q9UBN7 1215 aa23.62■■□□□ 1.37
ABR-233ENST00000575934 CHD7Q9P2D1 2997 aa23.61■■□□□ 1.37
ABR-233ENST00000575934 GGPS1O95749 300 aa23.61■■□□□ 1.37
ABR-233ENST00000575934 ACTN1P12814 892 aa23.61■■□□□ 1.37
ABR-233ENST00000575934 RABGGTBP53611 331 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms