RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	TCRBV5S4A2T	A0A5A2	114 aa		11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	TMEM232	C9JQI7	657 aa		11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	CSPG5	O95196	566 aa		11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	BMP3	P12645	472 aa		11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	ALDH5A1	P51649	535 aa	Predicted RBP	11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	IK	Q13123	557 aa	Predicted RBP	11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	PTK7	Q13308	1070 aa		11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	MBTPS1	Q14703	1052 aa		11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	FIBCD1	Q8N539	461 aa		11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	C7orf31	Q8N865	590 aa		11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	TMEM105	Q8N8V8	129 aa		11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	SCFD2	Q8WU76	684 aa		11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	COPS5	Q92905	334 aa		11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	MKL1	Q969V6	931 aa		11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	MKNK2	Q9HBH9	465 aa		11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	CLEC1B	Q9P126	229 aa		11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	USP15	Q9Y4E8	981 aa	Predicted RBP	11.22	□□□□□ -0.61
PABPN1-208	ENST00000557702	TXN	P10599	105 aa	Known RBP	11.21	□□□□□ -0.61
PABPN1-208	ENST00000557702	PDE4B	Q07343	736 aa		11.21	□□□□□ -0.61
PABPN1-208	ENST00000557702	POLA2	Q14181	598 aa		11.21	□□□□□ -0.61
PABPN1-208	ENST00000557702	CTR9	Q6PD62	1173 aa		11.21	□□□□□ -0.61
PABPN1-208	ENST00000557702	TRAF7	Q6Q0C0	670 aa		11.21	□□□□□ -0.61
PABPN1-208	ENST00000557702	FAM160B2	Q86V87	743 aa		11.21	□□□□□ -0.61
PABPN1-208	ENST00000557702	GMCL1P1	Q8NEA9	526 aa		11.21	□□□□□ -0.61
PABPN1-208	ENST00000557702	KCNG4	Q8TDN1	519 aa		11.21	□□□□□ -0.61
PABPN1-208	ENST00000557702	IL17RA	Q96F46	866 aa		11.21	□□□□□ -0.61
PABPN1-208	ENST00000557702	MPHOSPH6	Q99547	160 aa	Known RBP	11.21	□□□□□ -0.61
PABPN1-208	ENST00000557702	HDAC6	Q9UBN7	1215 aa		11.21	□□□□□ -0.61
PABPN1-208	ENST00000557702	SYNPO2	Q9UMS6	1093 aa		11.21	□□□□□ -0.61
PABPN1-208	ENST00000557702	DMXL1	Q9Y485	3027 aa		11.21	□□□□□ -0.62
PABPN1-208	ENST00000557702	MBD4	O95243	580 aa		11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	MMP1	P03956	469 aa		11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	ATF7	P17544	494 aa	Predicted RBP	11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	CAST	P20810	708 aa	Known RBP	11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	RASA1	P20936	1047 aa		11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	PDE4D	Q08499	809 aa		11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	BAAT	Q14032	418 aa	Predicted RBP	11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	TRIM71	Q2Q1W2	868 aa	Known RBP	11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	PLEKHG4	Q58EX7	1191 aa		11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	SLFN13	Q68D06	897 aa		11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	KIAA2013	Q8IYS2	634 aa		11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	EFHB	Q8N7U6	833 aa		11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	STAG1	Q8WVM7	1258 aa		11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	SEPT8	Q92599	483 aa		11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	IFIH1	Q9BYX4	1025 aa	Known RBP	11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	CFAP47	Q6ZTR5	3102 aa		11.2	□□□□□ -0.62
PABPN1-208	ENST00000557702	BAZ2A	Q9UIF9	1905 aa	Known RBP	11.19	□□□□□ -0.62
PABPN1-208	ENST00000557702	RSPH10B2	B2RC85	870 aa		11.19	□□□□□ -0.62
PABPN1-208	ENST00000557702	RBAK-RBAKDN	I3L0D1	243 aa		11.19	□□□□□ -0.62
PABPN1-208	ENST00000557702	TTLL1	O95922	423 aa		11.19	□□□□□ -0.62
PABPN1-208	ENST00000557702	MMP3	P08254	477 aa		11.19	□□□□□ -0.62
PABPN1-208	ENST00000557702	RSPH10B	P0C881	870 aa		11.19	□□□□□ -0.62
PABPN1-208	ENST00000557702	SLC1A4	P43007	532 aa		11.19	□□□□□ -0.62
PABPN1-208	ENST00000557702	ST3GAL2	Q16842	350 aa		11.19	□□□□□ -0.62
PABPN1-208	ENST00000557702	ASTL	Q6HA08	431 aa	Predicted RBP	11.19	□□□□□ -0.62
PABPN1-208	ENST00000557702	SSH3	Q8TE77	659 aa		11.19	□□□□□ -0.62
PABPN1-208	ENST00000557702	AFG1L	Q8WV93	481 aa		11.19	□□□□□ -0.62
PABPN1-208	ENST00000557702	KAT2B	Q92831	832 aa		11.19	□□□□□ -0.62
PABPN1-208	ENST00000557702	CCPG1	Q9ULG6	757 aa		11.19	□□□□□ -0.62
PABPN1-208	ENST00000557702	BARX2	Q9UMQ3	279 aa	Predicted RBP	11.19	□□□□□ -0.62
PABPN1-208	ENST00000557702	ATRX	P46100	2492 aa		11.19	□□□□□ -0.62
PABPN1-208	ENST00000557702	SPTBN2	O15020	2390 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	IGKV6D-41	A0A0C4DH26	115 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	PTPDC1	A2A3K4	754 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	GOLIM4	O00461	696 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	BCAR3	O75815	825 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	SNAP25	P60880	206 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	ATP8B2	P98198	1209 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	UBALD2	Q8IYN6	164 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	STK11IP	Q8N1F8	1099 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	ARHGAP45	Q92619	1136 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	CLP1	Q92989	425 aa	Known RBP	11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	WNT8B	Q93098	351 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	CEP95	Q96GE4	821 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	ALG1	Q9BT22	464 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	KATNAL1	Q9BW62	490 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	PLVAP	Q9BX97	442 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	SEMA4A	Q9H3S1	761 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	MTMR4	Q9NYA4	1195 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	DLL3	Q9NYJ7	618 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	PLAGL2	Q9UPG8	496 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	NOP58	Q9Y2X3	529 aa	Known RBP	11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	PCDHGC5	Q9Y5F6	944 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	SLC4A4	Q9Y6R1	1079 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	NLRC5	Q86WI3	1866 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	PKD1L2	Q7Z442	2459 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	CEP250	Q9BV73	2442 aa		11.18	□□□□□ -0.62
PABPN1-208	ENST00000557702	RALGAPA2	Q2PPJ7	1873 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	ZBED9	Q6R2W3	1325 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702		B4DLN1	442 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	PLA2G6	O60733	806 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	LMNA	P02545	664 aa	Known RBP	11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	LINC00271	P0C7V0	271 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	ADD2	P35612	726 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	THPO	P40225	353 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	NRIP1	P48552	1158 aa		11.17	□□□□□ -0.62
PABPN1-208	ENST00000557702	PSEN2	P49810	448 aa		11.17	□□□□□ -0.62

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