RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 SREBF1P36956 1147 aa16.16■□□□□ 0.18
SNX6-206ENST00000556162 IFFO2Q5TF58 517 aa16.16■□□□□ 0.18
SNX6-206ENST00000556162 DIS3L2Q8IYB7 885 aaKnown RBP16.16■□□□□ 0.18
SNX6-206ENST00000556162 OXER1Q8TDS5 423 aa16.16■□□□□ 0.18
SNX6-206ENST00000556162 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.16■□□□□ 0.188e-7■□□□□ 9.9
SNX6-206ENST00000556162 FAM184BQ9ULE4 1060 aa16.16■□□□□ 0.18
SNX6-206ENST00000556162 CCDC194A0A1B0GVG4 234 aa16.15■□□□□ 0.18
SNX6-206ENST00000556162 BTBD18B2RXH4 712 aa16.15■□□□□ 0.18
SNX6-206ENST00000556162 PDCP20941 246 aa16.15■□□□□ 0.18
SNX6-206ENST00000556162 MRPS9P82933 396 aaKnown RBP16.15■□□□□ 0.18
SNX6-206ENST00000556162 CCDC144BQ3MJ40 725 aa16.15■□□□□ 0.18
SNX6-206ENST00000556162 TAPT1Q6NXT6 567 aa16.15■□□□□ 0.18
SNX6-206ENST00000556162 SEPT14Q6ZU15 432 aa16.15■□□□□ 0.18
SNX6-206ENST00000556162 KRT25Q7Z3Z0 450 aa16.15■□□□□ 0.18
SNX6-206ENST00000556162 ZFP91Q96JP5 570 aaPredicted RBP16.15■□□□□ 0.18
SNX6-206ENST00000556162 TMEM106CQ9BVX2 250 aa16.15■□□□□ 0.18
SNX6-206ENST00000556162 RTEL1Q9NZ71 1219 aa16.15■□□□□ 0.18
SNX6-206ENST00000556162 AKR1A1P14550 325 aa16.14■□□□□ 0.17
SNX6-206ENST00000556162 ZNF76P36508 570 aa16.14■□□□□ 0.17
SNX6-206ENST00000556162 ARHGAP4P98171 946 aa16.14■□□□□ 0.17
SNX6-206ENST00000556162 NR5A1Q13285 461 aa16.14■□□□□ 0.17
SNX6-206ENST00000556162 GNL2Q13823 731 aaKnown RBP16.14■□□□□ 0.17
SNX6-206ENST00000556162 NONOQ15233 471 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNX6-206ENST00000556162 GNPTABQ3T906 1256 aa16.14■□□□□ 0.17
SNX6-206ENST00000556162 IQSEC1Q6DN90 963 aa16.14■□□□□ 0.17
SNX6-206ENST00000556162 ABHD8Q96I13 439 aa16.14■□□□□ 0.17
SNX6-206ENST00000556162 PDGFCQ9NRA1 345 aa16.14■□□□□ 0.17
SNX6-206ENST00000556162 BRCA2P51587 3418 aa16.14■□□□□ 0.17
SNX6-206ENST00000556162 MSCO60682 206 aa16.14■□□□□ 0.17
SNX6-206ENST00000556162 ADCYAP1R1P41586 468 aa16.14■□□□□ 0.17
SNX6-206ENST00000556162 TBCKQ8TEA7 893 aa16.14■□□□□ 0.17
SNX6-206ENST00000556162 SCFD2Q8WU76 684 aa16.14■□□□□ 0.17
SNX6-206ENST00000556162 PAK6Q9NQU5 681 aaPredicted RBP16.14■□□□□ 0.17
SNX6-206ENST00000556162 DDX20Q9UHI6 824 aaKnown RBP16.14■□□□□ 0.17
SNX6-206ENST00000556162 MCM3APO60318 1980 aa16.13■□□□□ 0.17
SNX6-206ENST00000556162 RBM47A0AV96 593 aaKnown RBP16.13■□□□□ 0.17
SNX6-206ENST00000556162 CYP3A4P08684 503 aa16.13■□□□□ 0.17
SNX6-206ENST00000556162 USP11P51784 963 aa16.13■□□□□ 0.17
SNX6-206ENST00000556162 TNFAIP2Q03169 654 aa16.13■□□□□ 0.17
SNX6-206ENST00000556162 TTLL4Q14679 1199 aa16.13■□□□□ 0.17
SNX6-206ENST00000556162 PIK3AP1Q6ZUJ8 805 aa16.13■□□□□ 0.17
SNX6-206ENST00000556162 NLRX1Q86UT6 975 aa16.13■□□□□ 0.17
SNX6-206ENST00000556162 SPRYD3Q8NCJ5 442 aa16.13■□□□□ 0.17
SNX6-206ENST00000556162 DEFB118Q96PH6 123 aa16.13■□□□□ 0.17
SNX6-206ENST00000556162 WDR11Q9BZH6 1224 aa16.13■□□□□ 0.17
SNX6-206ENST00000556162 FOXP1Q9H334 677 aaPredicted RBP16.13■□□□□ 0.17
SNX6-206ENST00000556162 RGS20O76081 388 aa16.12■□□□□ 0.17
SNX6-206ENST00000556162 GJB1P08034 283 aa16.12■□□□□ 0.17
SNX6-206ENST00000556162 RARBP10826 455 aa16.12■□□□□ 0.17
SNX6-206ENST00000556162 KCNV1Q6PIU1 500 aa16.12■□□□□ 0.17
SNX6-206ENST00000556162 CRYGNQ8WXF5 182 aa16.12■□□□□ 0.17
SNX6-206ENST00000556162 INPP4AQ96PE3 977 aaPredicted RBP16.12■□□□□ 0.17
SNX6-206ENST00000556162 MRVI1Q9Y6F6 885 aa16.12■□□□□ 0.17
SNX6-206ENST00000556162 TXNP10599 105 aaKnown RBP16.12■□□□□ 0.17
SNX6-206ENST00000556162 TGFB3P10600 412 aa16.12■□□□□ 0.17
SNX6-206ENST00000556162 INF2Q27J81 1249 aa16.12■□□□□ 0.17
SNX6-206ENST00000556162 CEP55Q53EZ4 464 aa16.12■□□□□ 0.17
SNX6-206ENST00000556162 ANO1Q5XXA6 986 aa16.12■□□□□ 0.17
SNX6-206ENST00000556162 MCTP1Q6DN14 999 aa16.12■□□□□ 0.17
SNX6-206ENST00000556162 TNFRSF25Q93038 417 aa16.12■□□□□ 0.17
SNX6-206ENST00000556162 MXRA8Q9BRK3 442 aa16.12■□□□□ 0.17
SNX6-206ENST00000556162 UBIAD1Q9Y5Z9 338 aa16.12■□□□□ 0.17
SNX6-206ENST00000556162 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.11■□□□□ 0.17
SNX6-206ENST00000556162 MAFGO15525 162 aa16.11■□□□□ 0.17
SNX6-206ENST00000556162 DUSP11O75319 330 aaKnown RBP16.11■□□□□ 0.17
SNX6-206ENST00000556162 SMPD1P17405 629 aa16.11■□□□□ 0.17
SNX6-206ENST00000556162 ITGB5P18084 799 aa16.11■□□□□ 0.17
SNX6-206ENST00000556162 DUSP28Q4G0W2 176 aa16.11■□□□□ 0.17
SNX6-206ENST00000556162 LHX8Q68G74 356 aa16.11■□□□□ 0.17
SNX6-206ENST00000556162 GPRASP2Q96D09 838 aa16.11■□□□□ 0.17
SNX6-206ENST00000556162 CDHR1Q96JP9 859 aa16.11■□□□□ 0.17
SNX6-206ENST00000556162 JADE2Q9NQC1 790 aa16.11■□□□□ 0.17
SNX6-206ENST00000556162 SPATA31C2B4DYI2 1134 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 FIBPO43427 364 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 SGPL1O95470 568 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 SYT1P21579 422 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 ICAM3P32942 547 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 ANP32AP39687 249 aaKnown RBP16.1■□□□□ 0.17
SNX6-206ENST00000556162 MTMR1Q13613 665 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 EARS2Q5JPH6 523 aaKnown RBP16.1■□□□□ 0.17
SNX6-206ENST00000556162 CCDC62Q6P9F0 684 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 NEK8Q86SG6 692 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 CYP2W1Q8TAV3 490 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 U2AF1L4Q8WU68 220 aaKnown RBP16.1■□□□□ 0.17
SNX6-206ENST00000556162 DDX41Q9UJV9 622 aaKnown RBP16.1■□□□□ 0.17
SNX6-206ENST00000556162 VPS37CA5D8V6 355 aaPredicted RBP16.1■□□□□ 0.17
SNX6-206ENST00000556162 CCDC85CA6NKD9 419 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 MEIS1O00470 390 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 NKRFO15226 690 aaKnown RBP eCLIP16.1■□□□□ 0.17
SNX6-206ENST00000556162 TFRCP02786 760 aaKnown RBP16.1■□□□□ 0.17
SNX6-206ENST00000556162 U2AF2P26368 475 aaKnown RBP eCLIP16.1■□□□□ 0.171e-8■■□□□ 13.1
SNX6-206ENST00000556162 CIITAP33076 1130 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 LY6KQ17RY6 165 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 LETM2Q2VYF4 491 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 NIPA1Q7RTP0 329 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 NOSTRINQ8IVI9 506 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 SPC25Q9HBM1 224 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 XPNPEP3Q9NQH7 507 aa16.1■□□□□ 0.17
SNX6-206ENST00000556162 FAM86B1E9PN63 330 aa16.09■□□□□ 0.17
SNX6-206ENST00000556162 ADCY6O43306 1168 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms