RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 ALDH8A1Q9H2A2 487 aaPredicted RBP9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 LY9Q9HBG7 655 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 TRMT13Q9NUP7 481 aaKnown RBP9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 MYH7BA7E2Y1 1941 aa9.89□□□□□ -0.83
SFSWAP-202ENST00000535202 PNMA6FA0A0J9YX94 578 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 CCDC69A6NI79 296 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 GCOM1H8Y6P7 765 aaPredicted RBP9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 SH2B2O14492 632 aaPredicted RBP9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 SORBS3O60504 671 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 EIF3JO75822 258 aaKnown RBP9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 DDAH1O94760 285 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 MMP3P08254 477 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 POLR2MP0CAP2 368 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 CYP2C9P11712 490 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 KIF5BP33176 963 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 MCM5P33992 734 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 GHRHRQ02643 423 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 ARHGAP1Q07960 439 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 TRAF1Q13077 416 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 NBPF20Q3BBV1 942 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 BMP2KLQ5H9B9 411 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 ZNF365Q70YC5 407 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 C16orf59Q7L2K0 433 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 FCHSD1Q86WN1 690 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 SLC17A8Q8NDX2 589 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 AFG1LQ8WV93 481 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 TMEM87BQ96K49 555 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 PDCD2LQ9BRP1 358 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 WNT8AQ9H1J5 351 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 SEMA6BQ9H3T3 888 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 IL23AQ9NPF7 189 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 MAP3K20Q9NYL2 800 aaKnown RBP9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 MRVI1Q9Y6F6 885 aa9.88□□□□□ -0.83
SFSWAP-202ENST00000535202 SUPT20HL2P0C7V6 817 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 RXRAP19793 462 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 CCND2P30279 289 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 CLCN1P35523 988 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 COL9A3Q14050 684 aaPredicted RBP9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 PGM5Q15124 567 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 NECTIN1Q15223 517 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 NFRKBQ6P4R8 1299 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 RAB11FIP4Q86YS3 637 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 SAMD3Q8N6K7 520 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 IL31RAQ8NI17 732 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 RRP36Q96EU6 259 aaKnown RBP9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 SCLYQ96I15 445 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 ZFP91Q96JP5 570 aaPredicted RBP9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 MAP3K14Q99558 947 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 MTA3Q9BTC8 594 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 LRRC2Q9BYS8 371 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 TTYH1Q9H313 450 aaPredicted RBP9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 SEC63Q9UGP8 760 aaKnown RBP9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 DDX41Q9UJV9 622 aaKnown RBP9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 NOD1Q9Y239 953 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 TANC1Q9C0D5 1861 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 SCN5AQ14524 2016 aa9.87□□□□□ -0.83
SFSWAP-202ENST00000535202 GRXCR1A8MXD5 290 aa9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 CDC45O75419 566 aa9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 PLEKHA8P1O95397 391 aa9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 FGBP02675 491 aa9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 CASTP20810 708 aaKnown RBP9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 DNAJB2P25686 324 aa9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 GNAQP50148 359 aa9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 PTPN11Q06124 597 aaPredicted RBP9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 RNF20Q5VTR2 975 aa9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 OTOP2Q7RTS6 562 aa9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 DHX37Q8IY37 1157 aaKnown RBP9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 RPUSD2Q8IZ73 545 aaKnown RBP9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 TMTC2Q8N394 836 aa9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 MYLIPQ8WY64 445 aa9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 HERVK_113Q902F9 699 aa9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 GBF1Q92538 1859 aa9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 TIFAQ96CG3 184 aa9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 CDX2Q99626 313 aaPredicted RBP9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 SPZ1Q9BXG8 430 aa9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 MTIF3Q9H2K0 278 aaKnown RBP9.86□□□□□ -0.83
SFSWAP-202ENST00000535202 TMEM265A0A087WTH1 108 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 RGS20O76081 388 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 ZNF286BP0CG31 522 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 CALM1P0DP23 149 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 CALM2P0DP24 149 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 CALM3P0DP25 149 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 PBX2P40425 430 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 LIFRP42702 1097 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 LAMC2Q13753 1193 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 PTGISQ16647 500 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 DGKDQ16760 1214 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 RASIP1Q5U651 963 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 KCNV1Q6PIU1 500 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 DEFB128Q7Z7B8 93 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 VSIG10LQ86VR7 867 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 MICU3Q86XE3 530 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 CMTR1Q8N1G2 835 aaKnown RBP9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 SRBD1Q8N5C6 995 aaKnown RBP9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 RETREG2Q8NC44 543 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 PPTC7Q8NI37 304 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 SMARCC2Q8TAQ2 1214 aa9.85□□□□□ -0.83
SFSWAP-202ENST00000535202 KAT2BQ92831 832 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms