RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 TOP1P11387 765 aaKnown RBP14.62□□□□□ -0.07
CAPN1-223ENST00000533079 CASTP20810 708 aaKnown RBP14.62□□□□□ -0.07
CAPN1-223ENST00000533079 SLC16A2P36021 539 aa14.62□□□□□ -0.07
CAPN1-223ENST00000533079 PTK7Q13308 1070 aa14.62□□□□□ -0.07
CAPN1-223ENST00000533079 ZMYM1Q5SVZ6 1142 aa14.62□□□□□ -0.07
CAPN1-223ENST00000533079 CCDC62Q6P9F0 684 aa14.62□□□□□ -0.07
CAPN1-223ENST00000533079 TMCO2Q7Z6W1 182 aaPredicted RBP14.62□□□□□ -0.07
CAPN1-223ENST00000533079 SP7Q8TDD2 431 aaPredicted RBP14.62□□□□□ -0.07
CAPN1-223ENST00000533079 EMID1Q96A84 441 aaPredicted RBP14.62□□□□□ -0.07
CAPN1-223ENST00000533079 CHMP4CQ96CF2 233 aa14.62□□□□□ -0.07
CAPN1-223ENST00000533079 MTMR7Q9Y216 660 aa14.62□□□□□ -0.07
CAPN1-223ENST00000533079 MUC6Q6W4X9 2439 aa14.62□□□□□ -0.07
CAPN1-223ENST00000533079 TET1Q8NFU7 2136 aa14.62□□□□□ -0.07
CAPN1-223ENST00000533079 AMHP03971 560 aa14.61□□□□□ -0.07
CAPN1-223ENST00000533079 ARHGAP1Q07960 439 aa14.61□□□□□ -0.07
CAPN1-223ENST00000533079 DGKDQ16760 1214 aa14.61□□□□□ -0.07
CAPN1-223ENST00000533079 TTBK2Q6IQ55 1244 aa14.61□□□□□ -0.07
CAPN1-223ENST00000533079 C7orf31Q8N865 590 aa14.61□□□□□ -0.07
CAPN1-223ENST00000533079 PPP1R13LQ8WUF5 828 aa14.61□□□□□ -0.07
CAPN1-223ENST00000533079 AFG1LQ8WV93 481 aa14.61□□□□□ -0.07
CAPN1-223ENST00000533079 KAT2BQ92831 832 aa14.61□□□□□ -0.07
CAPN1-223ENST00000533079 PABPC5Q96DU9 382 aaKnown RBP14.61□□□□□ -0.07
CAPN1-223ENST00000533079 UIMC1Q96RL1 719 aa14.61□□□□□ -0.07
CAPN1-223ENST00000533079 SEC62Q99442 399 aaKnown RBP14.61□□□□□ -0.07
CAPN1-223ENST00000533079 FSD1Q9BTV5 496 aa14.61□□□□□ -0.07
CAPN1-223ENST00000533079 TCP11L1Q9NUJ3 509 aa14.61□□□□□ -0.07
CAPN1-223ENST00000533079 POTEB3A0JP26 581 aa14.6□□□□□ -0.07
CAPN1-223ENST00000533079 F2P00734 622 aa14.6□□□□□ -0.07
CAPN1-223ENST00000533079 FGRP09769 529 aa14.6□□□□□ -0.07
CAPN1-223ENST00000533079 PDHBP11177 359 aa14.6□□□□□ -0.07
CAPN1-223ENST00000533079 CHMP4BP1P59074 171 aa14.6□□□□□ -0.07
CAPN1-223ENST00000533079 HTRA4P83105 476 aaPredicted RBP14.6□□□□□ -0.07
CAPN1-223ENST00000533079 COL19A1Q14993 1142 aa14.6□□□□□ -0.07
CAPN1-223ENST00000533079 TSHZ3Q63HK5 1081 aa14.6□□□□□ -0.07
CAPN1-223ENST00000533079 POTEBQ6S5H4 581 aa14.6□□□□□ -0.07
CAPN1-223ENST00000533079 UPF3BQ9BZI7 483 aaKnown RBP14.6□□□□□ -0.07
CAPN1-223ENST00000533079 FRMPD2Q68DX3 1309 aaPredicted RBP14.6□□□□□ -0.07
CAPN1-223ENST00000533079 RALGAPA2Q2PPJ7 1873 aa14.59□□□□□ -0.07
CAPN1-223ENST00000533079 LGR5O75473 907 aa14.59□□□□□ -0.07
CAPN1-223ENST00000533079 SNHG28P0DPA3 235 aa14.59□□□□□ -0.07
CAPN1-223ENST00000533079 ZP2Q05996 745 aa14.59□□□□□ -0.07
CAPN1-223ENST00000533079 CTDSPL2Q05D32 466 aa14.59□□□□□ -0.07
CAPN1-223ENST00000533079 ZNF543Q08ER8 600 aa14.59□□□□□ -0.07
CAPN1-223ENST00000533079 MKRN4PQ13434 485 aaPredicted RBP14.59□□□□□ -0.07
CAPN1-223ENST00000533079 NSUN6Q8TEA1 469 aaKnown RBP14.59□□□□□ -0.07
CAPN1-223ENST00000533079 FBXL18Q96ME1 805 aa14.59□□□□□ -0.07
CAPN1-223ENST00000533079 IWS1Q96ST2 819 aa14.59□□□□□ -0.07
CAPN1-223ENST00000533079 POP1Q99575 1024 aaKnown RBP14.59□□□□□ -0.07
CAPN1-223ENST00000533079 TMEM47Q9BQJ4 181 aa14.59□□□□□ -0.07
CAPN1-223ENST00000533079 C17orf80Q9BSJ5 609 aa14.59□□□□□ -0.07
CAPN1-223ENST00000533079 C19orf67A6NJJ6 358 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 H3BNC9 293 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 HAS3O00219 553 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 FOXP2O15409 715 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 NCK2O43639 380 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 PSEN2P49810 448 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 STXBP2Q15833 593 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 LY6KQ17RY6 165 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 TRIM71Q2Q1W2 868 aaKnown RBP14.58□□□□□ -0.08
CAPN1-223ENST00000533079 EPC2Q52LR7 807 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 GPATCH4Q5T3I0 446 aaKnown RBP14.58□□□□□ -0.08
CAPN1-223ENST00000533079 ZNF618Q5T7W0 954 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 TRAF7Q6Q0C0 670 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 ADHFE1Q8IWW8 467 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 BANK1Q8NDB2 785 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 PPTC7Q8NI37 304 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 PI4K2BQ8TCG2 481 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 TTC14Q96N46 770 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 NSUN3Q9H649 340 aaKnown RBP14.58□□□□□ -0.08
CAPN1-223ENST00000533079 DCTPP1Q9H773 170 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 GPCPD1Q9NPB8 672 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 HDAC6Q9UBN7 1215 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 ZMYM6O95789 1325 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 KIAA1217Q5T5P2 1943 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 MICAL3Q7RTP6 2002 aa14.58□□□□□ -0.08
CAPN1-223ENST00000533079 TRIP12Q14669 1992 aaPredicted RBP14.57□□□□□ -0.08
CAPN1-223ENST00000533079 PCP11498 1178 aaKnown RBP14.57□□□□□ -0.08
CAPN1-223ENST00000533079 HOXD8P13378 290 aaPredicted RBP14.57□□□□□ -0.08
CAPN1-223ENST00000533079 LAMC2Q13753 1193 aa14.57□□□□□ -0.08
CAPN1-223ENST00000533079 MFSD10Q14728 455 aa14.57□□□□□ -0.08
CAPN1-223ENST00000533079 KIAA0753Q2KHM9 967 aa14.57□□□□□ -0.08
CAPN1-223ENST00000533079 TCTN1Q2MV58 587 aa14.57□□□□□ -0.08
CAPN1-223ENST00000533079 MCF2L2Q86YR7 1114 aa14.57□□□□□ -0.08
CAPN1-223ENST00000533079 MYOCDQ8IZQ8 938 aa14.57□□□□□ -0.08
CAPN1-223ENST00000533079 SNX27Q96L92 541 aa14.57□□□□□ -0.08
CAPN1-223ENST00000533079 MFSD14AQ96MC6 490 aa14.57□□□□□ -0.08
CAPN1-223ENST00000533079 ABCB11O95342 1321 aa14.57□□□□□ -0.08
CAPN1-223ENST00000533079 H3BQ06 376 aaPredicted RBP14.56□□□□□ -0.08
CAPN1-223ENST00000533079 CAND2O75155 1236 aa14.56□□□□□ -0.08
CAPN1-223ENST00000533079 NT5C2P49902 561 aa14.56□□□□□ -0.08
CAPN1-223ENST00000533079 MBTPS1Q14703 1052 aa14.56□□□□□ -0.08
CAPN1-223ENST00000533079 ALX1Q15699 326 aa14.56□□□□□ -0.08
CAPN1-223ENST00000533079 PLEKHG4Q58EX7 1191 aa14.56□□□□□ -0.08
CAPN1-223ENST00000533079 FAM117BQ6P1L5 589 aa14.56□□□□□ -0.08
CAPN1-223ENST00000533079 SEPT14Q6ZU15 432 aa14.56□□□□□ -0.08
CAPN1-223ENST00000533079 FBXO11Q86XK2 927 aa14.56□□□□□ -0.08
CAPN1-223ENST00000533079 YME1L1Q96TA2 773 aa14.56□□□□□ -0.08
CAPN1-223ENST00000533079 TOMM22Q9NS69 142 aa14.56□□□□□ -0.08
CAPN1-223ENST00000533079 NLRC5Q86WI3 1866 aa14.55□□□□□ -0.08
CAPN1-223ENST00000533079 USH1GQ495M9 461 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms