RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 CRYGNQ8WXF5 182 aa18.16■□□□□ 0.5
COPS3-207ENST00000477299 TNFRSF25Q93038 417 aa18.16■□□□□ 0.5
COPS3-207ENST00000477299 UIMC1Q96RL1 719 aa18.16■□□□□ 0.5
COPS3-207ENST00000477299 IWS1Q96ST2 819 aa18.16■□□□□ 0.5
COPS3-207ENST00000477299 RNF208Q9H0X6 261 aa18.16■□□□□ 0.5
COPS3-207ENST00000477299 ABHD16BQ9H3Z7 469 aa18.16■□□□□ 0.5
COPS3-207ENST00000477299 HMX1Q9NP08 348 aaPredicted RBP18.16■□□□□ 0.5
COPS3-207ENST00000477299 CNPY2Q9Y2B0 182 aa18.16■□□□□ 0.5
COPS3-207ENST00000477299 POTEFA5A3E0 1075 aa18.15■□□□□ 0.5
COPS3-207ENST00000477299 ARIH2O95376 493 aa18.15■□□□□ 0.5
COPS3-207ENST00000477299 XBP1P17861 261 aa18.15■□□□□ 0.5
COPS3-207ENST00000477299 DIS3L2Q8IYB7 885 aaKnown RBP18.15■□□□□ 0.5
COPS3-207ENST00000477299 COPS5Q92905 334 aa18.15■□□□□ 0.5
COPS3-207ENST00000477299 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.15■□□□□ 0.5
COPS3-207ENST00000477299 GLT8D2Q9H1C3 349 aa18.15■□□□□ 0.5
COPS3-207ENST00000477299 WNT7AO00755 349 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 FOSP01100 380 aaPredicted RBP18.14■□□□□ 0.49
COPS3-207ENST00000477299 SMPD1P17405 629 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 ITGB5P18084 799 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 CCND2P30279 289 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 KRT2P35908 639 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 SREBF1P36956 1147 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 ARHGAP4P98171 946 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 SEMA3FQ13275 785 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 AP3B2Q13367 1082 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 INF2Q27J81 1249 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 PCNX4Q63HM2 1172 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 LARP1BQ659C4 914 aaKnown RBP18.14■□□□□ 0.49
COPS3-207ENST00000477299 LHX8Q68G74 356 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 BICD2Q8TD16 824 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 TBCKQ8TEA7 893 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 INTS4Q96HW7 963 aaKnown RBP18.14■□□□□ 0.49
COPS3-207ENST00000477299 DEFB118Q96PH6 123 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 WDR11Q9BZH6 1224 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 PAK6Q9NQU5 681 aaPredicted RBP18.14■□□□□ 0.49
COPS3-207ENST00000477299 TSHZ2Q9NRE2 1034 aa18.14■□□□□ 0.49
COPS3-207ENST00000477299 SORBS3O60504 671 aa18.13■□□□□ 0.49
COPS3-207ENST00000477299 EIF3JO75822 258 aaKnown RBP18.13■□□□□ 0.49
COPS3-207ENST00000477299 SP2Q02086 613 aa18.13■□□□□ 0.49
COPS3-207ENST00000477299 TRIM29Q14134 588 aa18.13■□□□□ 0.49
COPS3-207ENST00000477299 GALNT17Q6IS24 598 aa18.13■□□□□ 0.49
COPS3-207ENST00000477299 PIK3AP1Q6ZUJ8 805 aa18.13■□□□□ 0.49
COPS3-207ENST00000477299 VTA1Q9NP79 307 aa18.13■□□□□ 0.49
COPS3-207ENST00000477299 TELO2Q9Y4R8 837 aa18.13■□□□□ 0.49
COPS3-207ENST00000477299 BRCA2P51587 3418 aa18.13■□□□□ 0.49
COPS3-207ENST00000477299 LOC102724159A0A0B4J2E5 919 aa18.12■□□□□ 0.49
COPS3-207ENST00000477299 RBM47A0AV96 593 aaKnown RBP18.12■□□□□ 0.49
COPS3-207ENST00000477299 FAM86B1E9PN63 330 aa18.12■□□□□ 0.49
COPS3-207ENST00000477299 SEPT4O43236 478 aa18.12■□□□□ 0.49
COPS3-207ENST00000477299 FAM86B2P0C5J1 330 aa18.12■□□□□ 0.49
COPS3-207ENST00000477299 ARP10275 920 aa18.12■□□□□ 0.49
COPS3-207ENST00000477299 PWP2Q15269 919 aaKnown RBP18.12■□□□□ 0.49
COPS3-207ENST00000477299 LY6KQ17RY6 165 aa18.12■□□□□ 0.49
COPS3-207ENST00000477299 CCDC62Q6P9F0 684 aa18.12■□□□□ 0.49
COPS3-207ENST00000477299 FAM177A1Q8N128 213 aaPredicted RBP18.12■□□□□ 0.49
COPS3-207ENST00000477299 UBIAD1Q9Y5Z9 338 aa18.12■□□□□ 0.49
COPS3-207ENST00000477299 B4DLN1 442 aa18.11■□□□□ 0.49
COPS3-207ENST00000477299 ATP9AO75110 1047 aa18.11■□□□□ 0.49
COPS3-207ENST00000477299 SYT1P21579 422 aa18.11■□□□□ 0.49
COPS3-207ENST00000477299 TNFAIP2Q03169 654 aa18.11■□□□□ 0.49
COPS3-207ENST00000477299 INPP4AQ96PE3 977 aaPredicted RBP18.11■□□□□ 0.49
COPS3-207ENST00000477299 PKD2L1Q9P0L9 805 aa18.11■□□□□ 0.49
COPS3-207ENST00000477299 DDX20Q9UHI6 824 aaKnown RBP18.11■□□□□ 0.49
COPS3-207ENST00000477299 NRBP1Q9UHY1 535 aa18.11■□□□□ 0.49
COPS3-207ENST00000477299 DDX41Q9UJV9 622 aaKnown RBP18.11■□□□□ 0.49
COPS3-207ENST00000477299 FAM184BQ9ULE4 1060 aa18.11■□□□□ 0.49
COPS3-207ENST00000477299 CCDC194A0A1B0GVG4 234 aa18.1■□□□□ 0.49
COPS3-207ENST00000477299 MYADML2A6NDP7 307 aa18.1■□□□□ 0.49
COPS3-207ENST00000477299 TDP2O95551 362 aa18.1■□□□□ 0.49
COPS3-207ENST00000477299 PGK1P00558 417 aa18.1■□□□□ 0.49
COPS3-207ENST00000477299 CYP3A4P08684 503 aa18.1■□□□□ 0.49
COPS3-207ENST00000477299 TXNP10599 105 aaKnown RBP18.1■□□□□ 0.49
COPS3-207ENST00000477299 NONOQ15233 471 aaKnown RBP eCLIP18.1■□□□□ 0.49
COPS3-207ENST00000477299 IQSEC1Q6DN90 963 aa18.1■□□□□ 0.49
COPS3-207ENST00000477299 KRT25Q7Z3Z0 450 aa18.1■□□□□ 0.49
COPS3-207ENST00000477299 GJA10Q969M2 543 aa18.1■□□□□ 0.49
COPS3-207ENST00000477299 MPHOSPH6Q99547 160 aaKnown RBP18.1■□□□□ 0.49
COPS3-207ENST00000477299 MXRA8Q9BRK3 442 aa18.1■□□□□ 0.49
COPS3-207ENST00000477299 GNEQ9Y223 722 aaKnown RBP18.1■□□□□ 0.49
COPS3-207ENST00000477299 WDR81Q562E7 1941 aa18.1■□□□□ 0.49
COPS3-207ENST00000477299 IGLV3-22A0A075B6J6 115 aa18.09■□□□□ 0.49
COPS3-207ENST00000477299 CCDC85CA6NKD9 419 aa18.09■□□□□ 0.49
COPS3-207ENST00000477299 SPATA31C2B4DYI2 1134 aa18.09■□□□□ 0.49
COPS3-207ENST00000477299 CTAGE5O15320 804 aa18.09■□□□□ 0.49
COPS3-207ENST00000477299 HSP90AA1P07900 732 aaKnown RBP18.09■□□□□ 0.49
COPS3-207ENST00000477299 GJB1P08034 283 aa18.09■□□□□ 0.49
COPS3-207ENST00000477299 AKR1A1P14550 325 aa18.09■□□□□ 0.49
COPS3-207ENST00000477299 ATP2B1P20020 1258 aa18.09■□□□□ 0.49
COPS3-207ENST00000477299 ZNF76P36508 570 aa18.09■□□□□ 0.49
COPS3-207ENST00000477299 SOX10P56693 466 aa18.09■□□□□ 0.49
COPS3-207ENST00000477299 MCTP1Q6DN14 999 aa18.09■□□□□ 0.49
COPS3-207ENST00000477299 TEX2Q8IWB9 1127 aa18.09■□□□□ 0.49
COPS3-207ENST00000477299 U2AF1L4Q8WU68 220 aaKnown RBP18.09■□□□□ 0.49
COPS3-207ENST00000477299 LENG9Q96B70 501 aa18.09■□□□□ 0.49
COPS3-207ENST00000477299 EHMT1Q9H9B1 1298 aa18.09■□□□□ 0.49
COPS3-207ENST00000477299 JADE2Q9NQC1 790 aa18.09■□□□□ 0.49
COPS3-207ENST00000477299 VPS37CA5D8V6 355 aaPredicted RBP18.08■□□□□ 0.48
COPS3-207ENST00000477299 H3BQV1 296 aa18.08■□□□□ 0.48
COPS3-207ENST00000477299 MEIS1O00470 390 aa18.08■□□□□ 0.48
COPS3-207ENST00000477299 DYNC1LI2O43237 492 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms