RNA–Protein interactions for RNA: ENST00000475706.5

BRD9-203, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 744 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-203ENST00000475706 TRIOBPQ9H2D6 2365 aa13.34□□□□□ -0.27
BRD9-203ENST00000475706 DCDC2CA8MYV0 355 aa13.33□□□□□ -0.28
BRD9-203ENST00000475706 MEIS2O14770 477 aa13.33□□□□□ -0.28
BRD9-203ENST00000475706 PPFIA3O75145 1194 aa13.33□□□□□ -0.28
BRD9-203ENST00000475706 CABYRO75952 493 aa13.33□□□□□ -0.28
BRD9-203ENST00000475706 GH1P01241 217 aa13.33□□□□□ -0.28
BRD9-203ENST00000475706 PDIA3P30101 505 aaKnown RBP13.33□□□□□ -0.28
BRD9-203ENST00000475706 CPT1AP50416 773 aa13.33□□□□□ -0.28
BRD9-203ENST00000475706 NKX3-2P78367 333 aa13.33□□□□□ -0.28
BRD9-203ENST00000475706 MDM2Q00987 491 aaPredicted RBP13.33□□□□□ -0.28
BRD9-203ENST00000475706 STK3Q13188 491 aa13.33□□□□□ -0.28
BRD9-203ENST00000475706 SNX17Q15036 470 aa13.33□□□□□ -0.28
BRD9-203ENST00000475706 CCDC62Q6P9F0 684 aa13.33□□□□□ -0.28
BRD9-203ENST00000475706 VSIG10LQ86VR7 867 aa13.33□□□□□ -0.28
BRD9-203ENST00000475706 FBXL16Q8N461 479 aa13.33□□□□□ -0.28
BRD9-203ENST00000475706 POLR3EQ9NVU0 708 aa13.33□□□□□ -0.28
BRD9-203ENST00000475706 RTEL1Q9NZ71 1219 aa13.33□□□□□ -0.28
BRD9-203ENST00000475706 SCN10AQ9Y5Y9 1956 aa13.32□□□□□ -0.28
BRD9-203ENST00000475706 LTBP2Q14767 1821 aa13.32□□□□□ -0.28
BRD9-203ENST00000475706 MKI67P46013 3256 aaKnown RBP13.32□□□□□ -0.28
BRD9-203ENST00000475706 SPDYE3A6NKU9 549 aa13.32□□□□□ -0.28
BRD9-203ENST00000475706 ARVCFO00192 962 aa13.32□□□□□ -0.28
BRD9-203ENST00000475706 PIK3CDO00329 1044 aa13.32□□□□□ -0.28
BRD9-203ENST00000475706 SORBS3O60504 671 aa13.32□□□□□ -0.28
BRD9-203ENST00000475706 SEC24BO95487 1268 aa13.32□□□□□ -0.28
BRD9-203ENST00000475706 MAGEA10P43363 369 aaPredicted RBP13.32□□□□□ -0.28
BRD9-203ENST00000475706 PSMC6P62333 389 aa13.32□□□□□ -0.28
BRD9-203ENST00000475706 C1orf53Q5VUE5 145 aa13.32□□□□□ -0.28
BRD9-203ENST00000475706 PHKBQ93100 1093 aa13.32□□□□□ -0.28
BRD9-203ENST00000475706 LBHD1Q9BQE6 289 aaPredicted RBP13.32□□□□□ -0.28
BRD9-203ENST00000475706 SLC26A6Q9BXS9 759 aa13.32□□□□□ -0.28
BRD9-203ENST00000475706 NCOA5Q9HCD5 579 aaKnown RBP13.32□□□□□ -0.28
BRD9-203ENST00000475706 DDX41Q9UJV9 622 aaKnown RBP13.32□□□□□ -0.28
BRD9-203ENST00000475706 SMCO2A6NFE2 343 aa13.31□□□□□ -0.28
BRD9-203ENST00000475706 PRPF3O43395 683 aaKnown RBP13.31□□□□□ -0.28
BRD9-203ENST00000475706 CLTBP09497 229 aa13.31□□□□□ -0.28
BRD9-203ENST00000475706 ADCY7P51828 1080 aa13.31□□□□□ -0.28
BRD9-203ENST00000475706 CHMP4BP1P59074 171 aa13.31□□□□□ -0.28
BRD9-203ENST00000475706 ANAPC15P60006 121 aa13.31□□□□□ -0.28
BRD9-203ENST00000475706 ITGA7Q13683 1181 aa13.31□□□□□ -0.28
BRD9-203ENST00000475706 HABP4Q5JVS0 413 aaKnown RBP13.31□□□□□ -0.28
BRD9-203ENST00000475706 TYW1BQ6NUM6 668 aa13.31□□□□□ -0.28
BRD9-203ENST00000475706 KCNV1Q6PIU1 500 aa13.31□□□□□ -0.28
BRD9-203ENST00000475706 SH3RF1Q7Z6J0 888 aa13.31□□□□□ -0.28
BRD9-203ENST00000475706 DHX37Q8IY37 1157 aaKnown RBP13.31□□□□□ -0.28
BRD9-203ENST00000475706 AFG1LQ8WV93 481 aa13.31□□□□□ -0.28
BRD9-203ENST00000475706 MTG1Q9BT17 334 aaPredicted RBP13.31□□□□□ -0.28
BRD9-203ENST00000475706 PDLIM7Q9NR12 457 aa13.31□□□□□ -0.28
BRD9-203ENST00000475706 TMEM39AQ9NV64 488 aa13.31□□□□□ -0.28
BRD9-203ENST00000475706 RBM27Q9P2N5 1060 aaKnown RBP13.31□□□□□ -0.28
BRD9-203ENST00000475706 PCDHA6Q9UN73 950 aa13.31□□□□□ -0.28
BRD9-203ENST00000475706 PCDHA8Q9Y5H6 950 aa13.31□□□□□ -0.28
BRD9-203ENST00000475706 MROH7Q68CQ1 1323 aa13.31□□□□□ -0.28
BRD9-203ENST00000475706 hCG_1984214I3L0E3 225 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 STXBP3O00186 592 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 CPLX1O14810 134 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 TLR3O15455 904 aaKnown RBP13.3□□□□□ -0.28
BRD9-203ENST00000475706 RGS20O76081 388 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 SCG2P13521 617 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 CDK7P50613 346 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 EVCP57679 992 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 MRPS9P82933 396 aaKnown RBP13.3□□□□□ -0.28
BRD9-203ENST00000475706 ARHGAP1Q07960 439 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 NTRK3Q16288 839 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 PFKFB3Q16875 520 aaPredicted RBP13.3□□□□□ -0.28
BRD9-203ENST00000475706 GNPTABQ3T906 1256 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 PPP1R18Q6NYC8 613 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 ZNF713Q8N859 430 aaPredicted RBP13.3□□□□□ -0.28
BRD9-203ENST00000475706 ZNF274Q96GC6 653 aaPredicted RBP13.3□□□□□ -0.28
BRD9-203ENST00000475706 PGBD1Q96JS3 809 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 GDF15Q99988 308 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 UBE2OQ9C0C9 1292 aaKnown RBP13.3□□□□□ -0.28
BRD9-203ENST00000475706 EHMT1Q9H9B1 1298 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 RIC8AQ9NPQ8 531 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 BARHL2Q9NY43 387 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 FRMPD4Q14CM0 1322 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 NID2Q14112 1375 aa13.3□□□□□ -0.28
BRD9-203ENST00000475706 TRIM43BA6NCK2 446 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 A6NJR5 290 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 KPNA6O60684 536 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 STAM2O75886 525 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 GGPS1O95749 300 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 MMP3P08254 477 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 RAG1P15918 1043 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 IFNAR1P17181 557 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 PURAQ00577 322 aaKnown RBP13.29□□□□□ -0.28
BRD9-203ENST00000475706 SSRP1Q08945 709 aaKnown RBP13.29□□□□□ -0.28
BRD9-203ENST00000475706 FAAP100Q0VG06 881 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 LAMC2Q13753 1193 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 FAM47CQ5HY64 1035 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 PCNX4Q63HM2 1172 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 CPLX2Q6PUV4 134 aaKnown RBP13.29□□□□□ -0.28
BRD9-203ENST00000475706 NLRX1Q86UT6 975 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 PPP1R13LQ8WUF5 828 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 TRIM43Q96BQ3 446 aaPredicted RBP13.29□□□□□ -0.28
BRD9-203ENST00000475706 TOX2Q96NM4 488 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 RNF26Q9BY78 433 aaPredicted RBP13.29□□□□□ -0.28
BRD9-203ENST00000475706 MLXIPQ9HAP2 919 aa13.29□□□□□ -0.28
BRD9-203ENST00000475706 TGFB3P10600 412 aa13.28□□□□□ -0.28
BRD9-203ENST00000475706 UBA1P22314 1058 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms