RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 SGSM2O43147 1006 aa7.71□□□□□ -1.18
CD46-213ENST00000471987 TBX1O43435 398 aa7.71□□□□□ -1.18
CD46-213ENST00000471987 ECI1P42126 302 aa7.71□□□□□ -1.18
CD46-213ENST00000471987 ZFYVE27Q5T4F4 411 aa7.71□□□□□ -1.18
CD46-213ENST00000471987 ACBD5Q5T8D3 534 aaPredicted RBP7.71□□□□□ -1.18
CD46-213ENST00000471987 DDX11Q96FC9 970 aa7.71□□□□□ -1.18
CD46-213ENST00000471987 SMARCA5O60264 1052 aaPredicted RBP7.7□□□□□ -1.18
CD46-213ENST00000471987 C8BP07358 591 aa7.7□□□□□ -1.18
CD46-213ENST00000471987 FGRP09769 529 aa7.7□□□□□ -1.18
CD46-213ENST00000471987 KCNJ6P48051 423 aa7.7□□□□□ -1.18
CD46-213ENST00000471987 SARSP49591 514 aaKnown RBP7.7□□□□□ -1.18
CD46-213ENST00000471987 GJA9P57773 515 aa7.7□□□□□ -1.18
CD46-213ENST00000471987 ARID5AQ03989 594 aa7.7□□□□□ -1.18
CD46-213ENST00000471987 TESK1Q15569 626 aa7.7□□□□□ -1.18
CD46-213ENST00000471987 CEP68Q76N32 757 aa7.7□□□□□ -1.18
CD46-213ENST00000471987 ZC3H18Q86VM9 953 aaKnown RBP7.7□□□□□ -1.18
CD46-213ENST00000471987 MIB1Q86YT6 1006 aa7.7□□□□□ -1.18
CD46-213ENST00000471987 CCDC103Q8IW40 242 aa7.7□□□□□ -1.18
CD46-213ENST00000471987 Q8N1Y9 231 aa7.7□□□□□ -1.18
CD46-213ENST00000471987 LINC00482Q8N8I6 264 aa7.7□□□□□ -1.18
CD46-213ENST00000471987 TRMT2BQ96GJ1 504 aaKnown RBP7.7□□□□□ -1.18
CD46-213ENST00000471987 KRTAP9-3Q9BYQ3 159 aa7.7□□□□□ -1.18
CD46-213ENST00000471987 X6R8D5 127 aa7.7□□□□□ -1.18
CD46-213ENST00000471987 FPR2P25090 351 aa7.69□□□□□ -1.18
CD46-213ENST00000471987 BCL6P41182 706 aa7.69□□□□□ -1.18
CD46-213ENST00000471987 UBXN11Q5T124 520 aa7.69□□□□□ -1.18
CD46-213ENST00000471987 MRM1Q6IN84 353 aaKnown RBP7.69□□□□□ -1.18
CD46-213ENST00000471987 EEPD1Q7L9B9 569 aa7.69□□□□□ -1.18
CD46-213ENST00000471987 PRRT2Q7Z6L0 340 aaPredicted RBP7.69□□□□□ -1.18
CD46-213ENST00000471987 MILR1Q7Z6M3 343 aa7.69□□□□□ -1.18
CD46-213ENST00000471987 KREMEN2Q8NCW0 462 aa7.69□□□□□ -1.18
CD46-213ENST00000471987 MICAL1Q8TDZ2 1067 aa7.69□□□□□ -1.18
CD46-213ENST00000471987 TMEM169Q96HH4 297 aa7.69□□□□□ -1.18
CD46-213ENST00000471987 EPN3Q9H201 632 aa7.69□□□□□ -1.18
CD46-213ENST00000471987 SPATA6Q9NWH7 488 aaPredicted RBP7.69□□□□□ -1.18
CD46-213ENST00000471987 TMEFF2Q9UIK5 374 aaPredicted RBP7.69□□□□□ -1.18
CD46-213ENST00000471987 PALD1Q9ULE6 856 aa7.69□□□□□ -1.18
CD46-213ENST00000471987 COA3Q9Y2R0 106 aaPredicted RBP7.69□□□□□ -1.18
CD46-213ENST00000471987 PRICKLE3O43900 615 aaPredicted RBP7.68□□□□□ -1.18
CD46-213ENST00000471987 NOBOXO60393 691 aa7.68□□□□□ -1.18
CD46-213ENST00000471987 LTBRP36941 435 aa7.68□□□□□ -1.18
CD46-213ENST00000471987 PLP2Q04941 152 aa7.68□□□□□ -1.18
CD46-213ENST00000471987 SMAD4Q13485 552 aaKnown RBP7.68□□□□□ -1.18
CD46-213ENST00000471987 RTP5Q14D33 572 aa7.68□□□□□ -1.18
CD46-213ENST00000471987 CD300LDQ6UXZ3 194 aa7.68□□□□□ -1.18
CD46-213ENST00000471987 PPIL6Q8IXY8 311 aa7.68□□□□□ -1.18
CD46-213ENST00000471987 GORASP1Q9BQQ3 440 aa7.68□□□□□ -1.18
CD46-213ENST00000471987 C11orf84Q9BUA3 381 aaPredicted RBP7.68□□□□□ -1.18
CD46-213ENST00000471987 BDH2Q9BUT1 245 aa7.68□□□□□ -1.18
CD46-213ENST00000471987 ZNF408Q9H9D4 720 aa7.68□□□□□ -1.18
CD46-213ENST00000471987 NGRNQ9NPE2 291 aaKnown RBP7.68□□□□□ -1.18
CD46-213ENST00000471987 R3HCC1Q9Y3T6 440 aaKnown RBP7.68□□□□□ -1.18
CD46-213ENST00000471987 AGRPO00253 132 aa7.67□□□□□ -1.18
CD46-213ENST00000471987 ARNTLO00327 626 aa7.67□□□□□ -1.18
CD46-213ENST00000471987 GFRA1P56159 465 aa7.67□□□□□ -1.18
CD46-213ENST00000471987 SF1Q15637 639 aaKnown RBP7.67□□□□□ -1.18
CD46-213ENST00000471987 CHRNA2Q15822 529 aa7.67□□□□□ -1.18
CD46-213ENST00000471987 NLRP10Q86W26 655 aa7.67□□□□□ -1.18
CD46-213ENST00000471987 FAM126BQ8IXS8 530 aa7.67□□□□□ -1.18
CD46-213ENST00000471987 KYQ8NBH2 561 aa7.67□□□□□ -1.18
CD46-213ENST00000471987 RCBTB1Q8NDN9 531 aa7.67□□□□□ -1.18
CD46-213ENST00000471987 TINF2Q9BSI4 451 aa7.67□□□□□ -1.18
CD46-213ENST00000471987 H7BY64 318 aa7.66□□□□□ -1.18
CD46-213ENST00000471987 GJB6O95452 261 aa7.66□□□□□ -1.18
CD46-213ENST00000471987 PRSS53Q2L4Q9 553 aa7.66□□□□□ -1.18
CD46-213ENST00000471987 ZNF761Q86XN6 746 aaPredicted RBP7.66□□□□□ -1.18
CD46-213ENST00000471987 TTLL6Q8N841 843 aa7.66□□□□□ -1.18
CD46-213ENST00000471987 TMEM145Q8NBT3 493 aa7.66□□□□□ -1.18
CD46-213ENST00000471987 YIPF4Q9BSR8 244 aa7.66□□□□□ -1.18
CD46-213ENST00000471987 CNOT11Q9UKZ1 510 aaKnown RBP7.66□□□□□ -1.18
CD46-213ENST00000471987 RPL13P26373 211 aaKnown RBP7.65□□□□□ -1.18
CD46-213ENST00000471987 THBS2P35442 1172 aa7.65□□□□□ -1.18
CD46-213ENST00000471987 LSAMPQ13449 338 aa7.65□□□□□ -1.18
CD46-213ENST00000471987 SLC10A6Q3KNW5 377 aa7.65□□□□□ -1.18
CD46-213ENST00000471987 FERMT3Q86UX7 667 aa7.65□□□□□ -1.18
CD46-213ENST00000471987 MCF2L2Q86YR7 1114 aa7.65□□□□□ -1.18
CD46-213ENST00000471987 FAM26EQ8N5C1 309 aa7.65□□□□□ -1.18
CD46-213ENST00000471987 ADAMTS17Q8TE56 1095 aa7.65□□□□□ -1.18
CD46-213ENST00000471987 CHAMP1Q96JM3 812 aa7.65□□□□□ -1.18
CD46-213ENST00000471987 LNPKQ9C0E8 428 aa7.65□□□□□ -1.18
CD46-213ENST00000471987 ZNF652Q9Y2D9 606 aa7.65□□□□□ -1.18
CD46-213ENST00000471987 PCDHA2Q9Y5H9 948 aa7.65□□□□□ -1.18
CD46-213ENST00000471987 HGSO14964 777 aaPredicted RBP7.64□□□□□ -1.19
CD46-213ENST00000471987 DNAJA1P31689 397 aaKnown RBP7.64□□□□□ -1.19
CD46-213ENST00000471987 SPATS1Q496A3 300 aa7.64□□□□□ -1.19
CD46-213ENST00000471987 DBX2Q6ZNG2 339 aa7.64□□□□□ -1.19
CD46-213ENST00000471987 DDX1Q92499 740 aaKnown RBP7.64□□□□□ -1.19
CD46-213ENST00000471987 C1orf159Q96HA4 380 aa7.64□□□□□ -1.19
CD46-213ENST00000471987 FBXL7Q9UJT9 491 aa7.64□□□□□ -1.19
CD46-213ENST00000471987 CAPNS1P04632 268 aa7.63□□□□□ -1.19
CD46-213ENST00000471987 LCP1P13796 627 aa7.63□□□□□ -1.19
CD46-213ENST00000471987 CNR2P34972 360 aa7.63□□□□□ -1.19
CD46-213ENST00000471987 ITGA1P56199 1179 aa7.63□□□□□ -1.19
CD46-213ENST00000471987 PPP2R2AP63151 447 aa7.63□□□□□ -1.19
CD46-213ENST00000471987 NKX3-2P78367 333 aa7.63□□□□□ -1.19
CD46-213ENST00000471987 EFEMP1Q12805 493 aa7.63□□□□□ -1.19
CD46-213ENST00000471987 SLC35F1Q5T1Q4 408 aa7.63□□□□□ -1.19
CD46-213ENST00000471987 DENND5AQ6IQ26 1287 aa7.63□□□□□ -1.19
CD46-213ENST00000471987 KCTD13Q8WZ19 329 aa7.63□□□□□ -1.19
CD46-213ENST00000471987 SYT3Q9BQG1 590 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms