RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 PUM1Q14671 1186 aaKnown RBP eCLIP5.78□□□□□ -1.48
KDM3A-208ENST00000463013 CBX2Q14781 532 aaPredicted RBP5.78□□□□□ -1.48
KDM3A-208ENST00000463013 NR1I3Q14994 352 aa5.78□□□□□ -1.48
KDM3A-208ENST00000463013 RAB3GAP1Q15042 981 aa5.78□□□□□ -1.48
KDM3A-208ENST00000463013 DENND5AQ6IQ26 1287 aa5.78□□□□□ -1.48
KDM3A-208ENST00000463013 PAQR3Q6TCH7 311 aa5.78□□□□□ -1.48
KDM3A-208ENST00000463013 RPTNQ6XPR3 784 aa5.78□□□□□ -1.48
KDM3A-208ENST00000463013 UBXN4Q92575 508 aa5.78□□□□□ -1.48
KDM3A-208ENST00000463013 MTA3Q9BTC8 594 aa5.78□□□□□ -1.48
KDM3A-208ENST00000463013 LUC7LQ9NQ29 371 aaKnown RBP5.78□□□□□ -1.48
KDM3A-208ENST00000463013 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.78□□□□□ -1.48
KDM3A-208ENST00000463013 FBLN5Q9UBX5 448 aa5.78□□□□□ -1.48
KDM3A-208ENST00000463013 PFDN2Q9UHV9 154 aa5.78□□□□□ -1.48
KDM3A-208ENST00000463013 GLI4P10075 376 aa5.77□□□□□ -1.49
KDM3A-208ENST00000463013 PABPC1P11940 636 aaKnown RBP5.77□□□□□ -1.49
KDM3A-208ENST00000463013 VIPR1P32241 457 aa5.77□□□□□ -1.49
KDM3A-208ENST00000463013 LTBRP36941 435 aa5.77□□□□□ -1.49
KDM3A-208ENST00000463013 SRSF3P84103 164 aaKnown RBP5.77□□□□□ -1.49
KDM3A-208ENST00000463013 IFRD2Q12894 506 aaPredicted RBP5.77□□□□□ -1.49
KDM3A-208ENST00000463013 CABP7Q86V35 215 aa5.77□□□□□ -1.49
KDM3A-208ENST00000463013 DPF3Q92784 378 aa5.77□□□□□ -1.49
KDM3A-208ENST00000463013 SRPK1Q96SB4 655 aaKnown RBP5.77□□□□□ -1.49
KDM3A-208ENST00000463013 OSBPL2Q9H1P3 480 aa5.77□□□□□ -1.49
KDM3A-208ENST00000463013 N4BP3O15049 544 aa5.76□□□□□ -1.49
KDM3A-208ENST00000463013 PRODHO43272 600 aa5.76□□□□□ -1.49
KDM3A-208ENST00000463013 ADCY3O60266 1144 aa5.76□□□□□ -1.49
KDM3A-208ENST00000463013 DIAPH1O60610 1272 aaKnown RBP5.76□□□□□ -1.49
KDM3A-208ENST00000463013 FUCA1P04066 466 aa5.76□□□□□ -1.49
KDM3A-208ENST00000463013 MAPKAPK2P49137 400 aa5.76□□□□□ -1.49
KDM3A-208ENST00000463013 RPL11P62913 178 aaKnown RBP5.76□□□□□ -1.49
KDM3A-208ENST00000463013 PLEKHN1Q494U1 663 aaPredicted RBP5.76□□□□□ -1.49
KDM3A-208ENST00000463013 YOD1Q5VVQ6 348 aaPredicted RBP5.76□□□□□ -1.49
KDM3A-208ENST00000463013 NSMFQ6X4W1 530 aa5.76□□□□□ -1.49
KDM3A-208ENST00000463013 PLEKHO2Q8TD55 490 aa5.76□□□□□ -1.49
KDM3A-208ENST00000463013 USP33Q8TEY7 942 aa5.76□□□□□ -1.49
KDM3A-208ENST00000463013 OSBP2Q969R2 916 aa5.76□□□□□ -1.49
KDM3A-208ENST00000463013 MBD1Q9UIS9 605 aaPredicted RBP5.76□□□□□ -1.49
KDM3A-208ENST00000463013 TIMM13Q9Y5L4 95 aaPredicted RBP5.76□□□□□ -1.49
KDM3A-208ENST00000463013 NPFFR2Q9Y5X5 522 aa5.76□□□□□ -1.49
KDM3A-208ENST00000463013 MYO1BO43795 1136 aa5.75□□□□□ -1.49
KDM3A-208ENST00000463013 GTF2A2P52657 109 aa5.75□□□□□ -1.49
KDM3A-208ENST00000463013 CNKSR3Q6P9H4 555 aa5.75□□□□□ -1.49
KDM3A-208ENST00000463013 ZC3H14Q6PJT7 736 aaKnown RBP5.75□□□□□ -1.49
KDM3A-208ENST00000463013 USP53Q70EK8 1073 aa5.75□□□□□ -1.49
KDM3A-208ENST00000463013 TMC6Q7Z403 805 aa5.75□□□□□ -1.49
KDM3A-208ENST00000463013 ZBTB38Q8NAP3 1195 aaPredicted RBP5.75□□□□□ -1.49
KDM3A-208ENST00000463013 NETO2Q8NC67 525 aa5.75□□□□□ -1.49
KDM3A-208ENST00000463013 RCBTB1Q8NDN9 531 aa5.75□□□□□ -1.49
KDM3A-208ENST00000463013 PANK1Q8TE04 598 aa5.75□□□□□ -1.49
KDM3A-208ENST00000463013 BTG4Q9NY30 223 aa5.75□□□□□ -1.49
KDM3A-208ENST00000463013 MARCH2Q9P0N8 246 aa5.75□□□□□ -1.49
KDM3A-208ENST00000463013 KDM2BQ8NHM5 1336 aa5.74□□□□□ -1.49
KDM3A-208ENST00000463013 F8W031 263 aaPredicted RBP5.74□□□□□ -1.49
KDM3A-208ENST00000463013 LCP1P13796 627 aa5.74□□□□□ -1.49
KDM3A-208ENST00000463013 BCL6P41182 706 aa5.74□□□□□ -1.49
KDM3A-208ENST00000463013 NFE2L2Q16236 605 aa5.74□□□□□ -1.49
KDM3A-208ENST00000463013 LONRF2Q1L5Z9 754 aa5.74□□□□□ -1.49
KDM3A-208ENST00000463013 WWC2Q6AWC2 1192 aa5.74□□□□□ -1.49
KDM3A-208ENST00000463013 TEX2Q8IWB9 1127 aa5.74□□□□□ -1.49
KDM3A-208ENST00000463013 Q8N1Y9 231 aa5.74□□□□□ -1.49
KDM3A-208ENST00000463013 DNAJC7Q99615 494 aa5.74□□□□□ -1.49
KDM3A-208ENST00000463013 BDH2Q9BUT1 245 aa5.74□□□□□ -1.49
KDM3A-208ENST00000463013 CNTD2Q9H8S5 307 aa5.74□□□□□ -1.49
KDM3A-208ENST00000463013 GPR27Q9NS67 375 aa5.74□□□□□ -1.49
KDM3A-208ENST00000463013 DBR1Q9UK59 544 aaKnown RBP5.74□□□□□ -1.49
KDM3A-208ENST00000463013 C22orf46C9J442 243 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 NTRK1P04629 796 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 FAM153BP0C7A2 387 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 FPR2P25090 351 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 PRR5P85299 388 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 NTRK3Q16288 839 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 FOXB2Q5VYV0 432 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 RSPO2Q6UXX9 243 aaPredicted RBP5.73□□□□□ -1.49
KDM3A-208ENST00000463013 NLRP10Q86W26 655 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 SCUBE1Q8IWY4 988 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 LINC01356Q8N9X3 169 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 DCAF4Q8WV16 495 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 PEX11GQ96HA9 241 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 CDC6Q99741 560 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 PHF20Q9BVI0 1012 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 FBXL7Q9UJT9 491 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 NUDT5Q9UKK9 219 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 CDK11AQ9UQ88 783 aaPredicted RBP5.73□□□□□ -1.49
KDM3A-208ENST00000463013 PCDHA2Q9Y5H9 948 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 HCFC2Q9Y5Z7 792 aa5.73□□□□□ -1.49
KDM3A-208ENST00000463013 TRBV23-1A0A0A0MS06 115 aa5.72□□□□□ -1.49
KDM3A-208ENST00000463013 CDR1P51861 262 aa5.72□□□□□ -1.49
KDM3A-208ENST00000463013 ZNF200P98182 395 aaPredicted RBP5.72□□□□□ -1.49
KDM3A-208ENST00000463013 LSAMPQ13449 338 aa5.72□□□□□ -1.49
KDM3A-208ENST00000463013 BMS1Q14692 1282 aaKnown RBP5.72□□□□□ -1.49
KDM3A-208ENST00000463013 MROH9Q5TGP6 573 aa5.72□□□□□ -1.49
KDM3A-208ENST00000463013 CEP68Q76N32 757 aa5.72□□□□□ -1.49
KDM3A-208ENST00000463013 DCP2Q8IU60 420 aaKnown RBP5.72□□□□□ -1.49
KDM3A-208ENST00000463013 RIOX2Q8IUF8 465 aa5.72□□□□□ -1.49
KDM3A-208ENST00000463013 TSPAN17Q96FV3 270 aa5.72□□□□□ -1.49
KDM3A-208ENST00000463013 TRMT2BQ96GJ1 504 aaKnown RBP5.72□□□□□ -1.49
KDM3A-208ENST00000463013 TMEM169Q96HH4 297 aa5.72□□□□□ -1.49
KDM3A-208ENST00000463013 IPO9Q96P70 1041 aaKnown RBP5.72□□□□□ -1.49
KDM3A-208ENST00000463013 LNPKQ9C0E8 428 aa5.72□□□□□ -1.49
KDM3A-208ENST00000463013 RXFP1Q9HBX9 757 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms