RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 RASGRP4Q8TDF6 673 aa15.14■□□□□ 0.01
PTPRE-204ENST00000455661 EDEM3Q9BZQ6 932 aa15.14■□□□□ 0.01
PTPRE-204ENST00000455661 MCM8Q9UJA3 840 aa15.14■□□□□ 0.01
PTPRE-204ENST00000455661 ZSCAN5CA6NGD5 496 aaPredicted RBP15.14■□□□□ 0.01
PTPRE-204ENST00000455661 IL2RBP14784 551 aa15.14■□□□□ 0.01
PTPRE-204ENST00000455661 ELF1P32519 619 aa15.14■□□□□ 0.01
PTPRE-204ENST00000455661 SNCBQ16143 134 aa15.14■□□□□ 0.01
PTPRE-204ENST00000455661 PDXDC1Q6P996 788 aa15.14■□□□□ 0.01
PTPRE-204ENST00000455661 RIOK1Q9BRS2 568 aaKnown RBP15.14■□□□□ 0.01
PTPRE-204ENST00000455661 PLCB1Q9NQ66 1216 aa15.14■□□□□ 0.01
PTPRE-204ENST00000455661 ABCB11O95342 1321 aa15.13■□□□□ 0.01
PTPRE-204ENST00000455661 DLEC1Q9Y238 1755 aa15.13■□□□□ 0.01
PTPRE-204ENST00000455661 SLC1A4P43007 532 aa15.13■□□□□ 0.01
PTPRE-204ENST00000455661 SLC9C1Q4G0N8 1177 aa15.13■□□□□ 0.01
PTPRE-204ENST00000455661 CENPPQ6IPU0 288 aa15.13■□□□□ 0.01
PTPRE-204ENST00000455661 GPKOWQ92917 476 aaPredicted RBP eCLIP15.13■□□□□ 0.01
PTPRE-204ENST00000455661 NUCKS1Q9H1E3 243 aaKnown RBP15.13■□□□□ 0.01
PTPRE-204ENST00000455661 SEMA6BQ9H3T3 888 aa15.13■□□□□ 0.01
PTPRE-204ENST00000455661 LRP5O75197 1615 aa15.13■□□□□ 0.01
PTPRE-204ENST00000455661 CLGNO14967 610 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 PALMO75781 387 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 IGHMBP2P38935 993 aaKnown RBP15.12■□□□□ 0.01
PTPRE-204ENST00000455661 DNA2P51530 1060 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 HLTFQ14527 1009 aaKnown RBP eCLIP15.12■□□□□ 0.01
PTPRE-204ENST00000455661 INF2Q27J81 1249 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 ASTE1Q2TB18 679 aaPredicted RBP15.12■□□□□ 0.01
PTPRE-204ENST00000455661 WLSQ5T9L3 541 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 RUFY4Q6ZNE9 571 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 PARP9Q8IXQ6 854 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 EIF1ADQ8N9N8 165 aaKnown RBP15.12■□□□□ 0.01
PTPRE-204ENST00000455661 BANK1Q8NDB2 785 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 LRRC45Q96CN5 670 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 TAF1DQ9H5J8 278 aaPredicted RBP15.12■□□□□ 0.01
PTPRE-204ENST00000455661 ODF2LQ9ULJ1 636 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 PCDHA6Q9UN73 950 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 PCDHA8Q9Y5H6 950 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 COL22A1Q8NFW1 1626 aaPredicted RBP15.12■□□□□ 0.01
PTPRE-204ENST00000455661 RBAK-RBAKDNI3L0D1 243 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 ORC4O43929 436 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 NMT2O60551 498 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 ATF3P18847 181 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 DYNLL1P63167 89 aaKnown RBP15.12■□□□□ 0.01
PTPRE-204ENST00000455661 GALNT17Q6IS24 598 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 ARHGAP27Q6ZUM4 889 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 BAP1Q92560 729 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 VEZTQ9HBM0 779 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 SLC39A2Q9NP94 309 aa15.12■□□□□ 0.01
PTPRE-204ENST00000455661 USP17L12C9JPN9 530 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 USP17L21D6R901 530 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 BIRC3Q13489 604 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 ODF2Q5BJF6 829 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 FAM47AQ5JRC9 791 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 ARMC9Q7Z3E5 817 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 GPIHBP1Q8IV16 184 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 TAF4BQ92750 862 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 ASAP1Q9ULH1 1129 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 BAZ2BQ9UIF8 2168 aaKnown RBP15.11■□□□□ 0.01
PTPRE-204ENST00000455661 NKRFO15226 690 aaKnown RBP eCLIP15.11■□□□□ 0.01
PTPRE-204ENST00000455661 FTCDO95954 541 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 CUL1Q13616 776 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 NAB2Q15742 525 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 TXNRD1Q16881 649 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 MEI1Q5TIA1 1274 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 CYB5D1Q6P9G0 228 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 KIAA0895Q8NCT3 520 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 LRRC15Q8TF66 581 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 N4BP2L2Q92802 583 aaPredicted RBP15.11■□□□□ 0.01
PTPRE-204ENST00000455661 CALML4Q96GE6 196 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 TANGO6Q9C0B7 1094 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 ISCUQ9H1K1 167 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 DDX20Q9UHI6 824 aaKnown RBP15.11■□□□□ 0.01
PTPRE-204ENST00000455661 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.11■□□□□ 0.01
PTPRE-204ENST00000455661 FLT1P17948 1338 aa15.11■□□□□ 0.01
PTPRE-204ENST00000455661 TSPY2A6NKD2 308 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 RAD51CO43502 376 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 SERPING1P05155 500 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 OR52Z1P0C646 297 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 EZRP15311 586 aaKnown RBP15.1■□□□□ 0.01
PTPRE-204ENST00000455661 IFFO1Q0D2I5 559 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 ANKRD36CQ5JPF3 1778 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 SFMBT2Q5VUG0 894 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 CEP57Q86XR8 500 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 KLHL7Q8IXQ5 586 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 MAGEC3Q8TD91 643 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 ERVV-1B6SEH8 477 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 M0R2N6 131 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 TRAPPC3O43617 180 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 ZPR1O75312 459 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 CTNNA1P35221 906 aaKnown RBP15.1■□□□□ 0.01
PTPRE-204ENST00000455661 HSD17B3P37058 310 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 EHHADHQ08426 723 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 SV2BQ7L1I2 683 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 TAX1BP1Q86VP1 789 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 CACNA2D3Q8IZS8 1091 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 USP38Q8NB14 1042 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 DAGLBQ8NCG7 672 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 SYN2Q92777 582 aaPredicted RBP15.1■□□□□ 0.01
PTPRE-204ENST00000455661 SGSM3Q96HU1 749 aa15.1■□□□□ 0.01
PTPRE-204ENST00000455661 GNAQP50148 359 aa15.09■□□□□ 0.01
PTPRE-204ENST00000455661 RNASE9P60153 205 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms