RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 TIFAQ96CG3 184 aa21.52■■□□□ 1.04
UBE2D4-208ENST00000454350 PIGSQ96S52 555 aa21.52■■□□□ 1.04
UBE2D4-208ENST00000454350 PDCD2LQ9BRP1 358 aa21.52■■□□□ 1.04
UBE2D4-208ENST00000454350 ZNF576Q9H609 170 aa21.52■■□□□ 1.04
UBE2D4-208ENST00000454350 GPHNQ9NQX3 736 aaPredicted RBP21.52■■□□□ 1.04
UBE2D4-208ENST00000454350 PCDHA1Q9Y5I3 950 aa21.52■■□□□ 1.04
UBE2D4-208ENST00000454350 EIF3JO75822 258 aaKnown RBP21.51■■□□□ 1.03
UBE2D4-208ENST00000454350 GH1P01241 217 aa21.51■■□□□ 1.03
UBE2D4-208ENST00000454350 PTPN11Q06124 597 aaPredicted RBP21.51■■□□□ 1.03
UBE2D4-208ENST00000454350 WTAPQ15007 396 aa21.51■■□□□ 1.03
UBE2D4-208ENST00000454350 OTOP2Q7RTS6 562 aa21.51■■□□□ 1.03
UBE2D4-208ENST00000454350 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.51■■□□□ 1.03
UBE2D4-208ENST00000454350 MAFAQ8NHW3 353 aaPredicted RBP21.51■■□□□ 1.03
UBE2D4-208ENST00000454350 IL31RAQ8NI17 732 aa21.51■■□□□ 1.03
UBE2D4-208ENST00000454350 EMID1Q96A84 441 aaPredicted RBP21.51■■□□□ 1.03
UBE2D4-208ENST00000454350 MAP3K20Q9NYL2 800 aaKnown RBP21.51■■□□□ 1.03
UBE2D4-208ENST00000454350 HOXA13P31271 388 aaPredicted RBP21.5■■□□□ 1.03
UBE2D4-208ENST00000454350 FAM47CQ5HY64 1035 aa21.5■■□□□ 1.03
UBE2D4-208ENST00000454350 RALYLQ86SE5 291 aaKnown RBP21.5■■□□□ 1.03
UBE2D4-208ENST00000454350 HOMER1Q86YM7 354 aa21.5■■□□□ 1.03
UBE2D4-208ENST00000454350 SAMD3Q8N6K7 520 aa21.5■■□□□ 1.03
UBE2D4-208ENST00000454350 LSG1Q9H089 658 aaKnown RBP21.5■■□□□ 1.03
UBE2D4-208ENST00000454350 FOSL2P15408 326 aa21.49■■□□□ 1.03
UBE2D4-208ENST00000454350 TMEM67Q5HYA8 995 aa21.49■■□□□ 1.03
UBE2D4-208ENST00000454350 VSIG10LQ86VR7 867 aa21.49■■□□□ 1.03
UBE2D4-208ENST00000454350 SESTD1Q86VW0 696 aa21.49■■□□□ 1.03
UBE2D4-208ENST00000454350 LY9Q9HBG7 655 aa21.49■■□□□ 1.03
UBE2D4-208ENST00000454350 PNMA6FA0A0J9YX94 578 aa21.48■■□□□ 1.03
UBE2D4-208ENST00000454350 ERICH2A1L162 156 aa21.48■■□□□ 1.03
UBE2D4-208ENST00000454350 HOXD8P13378 290 aaPredicted RBP21.48■■□□□ 1.03
UBE2D4-208ENST00000454350 PGM5Q15124 567 aa21.48■■□□□ 1.03
UBE2D4-208ENST00000454350 RPUSD2Q8IZ73 545 aaKnown RBP21.48■■□□□ 1.03
UBE2D4-208ENST00000454350 YBX2Q9Y2T7 364 aaKnown RBP21.48■■□□□ 1.03
UBE2D4-208ENST00000454350 PITPNM1O00562 1244 aa21.47■■□□□ 1.03
UBE2D4-208ENST00000454350 SART3Q15020 963 aaKnown RBP21.47■■□□□ 1.03
UBE2D4-208ENST00000454350 GDF6Q6KF10 455 aaPredicted RBP21.47■■□□□ 1.03
UBE2D4-208ENST00000454350 SKAP1Q86WV1 359 aa21.47■■□□□ 1.03
UBE2D4-208ENST00000454350 MAP3K14Q99558 947 aa21.47■■□□□ 1.03
UBE2D4-208ENST00000454350 ESYT1Q9BSJ8 1104 aa21.47■■□□□ 1.03
UBE2D4-208ENST00000454350 PFKMP08237 780 aa21.46■■□□□ 1.03
UBE2D4-208ENST00000454350 IQCF3P0C7M6 154 aa21.46■■□□□ 1.03
UBE2D4-208ENST00000454350 SP2Q02086 613 aa21.46■■□□□ 1.03
UBE2D4-208ENST00000454350 CATIPQ7Z7H3 387 aa21.46■■□□□ 1.03
UBE2D4-208ENST00000454350 ZNF654Q8IZM8 581 aa21.46■■□□□ 1.03
UBE2D4-208ENST00000454350 PPTC7Q8NI37 304 aa21.46■■□□□ 1.03
UBE2D4-208ENST00000454350 DHX38Q92620 1227 aaKnown RBP21.46■■□□□ 1.03
UBE2D4-208ENST00000454350 MYL10Q9BUA6 226 aa21.46■■□□□ 1.03
UBE2D4-208ENST00000454350 MTIF3Q9H2K0 278 aaKnown RBP21.46■■□□□ 1.03
UBE2D4-208ENST00000454350 MRVI1Q9Y6F6 885 aa21.46■■□□□ 1.03
UBE2D4-208ENST00000454350 FRMPD4Q14CM0 1322 aa21.46■■□□□ 1.03
UBE2D4-208ENST00000454350 SPTBN5Q9NRC6 3674 aaKnown RBP21.46■■□□□ 1.03
UBE2D4-208ENST00000454350 GCOM1H8Y6P7 765 aaPredicted RBP21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 HAS3O00219 553 aa21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 POLR2MP0CAP2 368 aa21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 MYCLP12524 364 aaPredicted RBP21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 CASTP20810 708 aaKnown RBP21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 LAMC2Q13753 1193 aa21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 GPNMBQ14956 572 aa21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 NECTIN1Q15223 517 aa21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 RAB30Q15771 203 aa21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 DGKDQ16760 1214 aa21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 MYSM1Q5VVJ2 828 aa21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 DEFB128Q7Z7B8 93 aa21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 USP38Q8NB14 1042 aa21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 GPKOWQ92917 476 aaPredicted RBP eCLIP21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 ZFP91Q96JP5 570 aaPredicted RBP21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 MTA3Q9BTC8 594 aa21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 COL25A1Q9BXS0 654 aaPredicted RBP21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 TRANK1O15050 2925 aa21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 TTC28Q96AY4 2481 aa21.45■■□□□ 1.02
UBE2D4-208ENST00000454350 REV3LO60673 3130 aa21.44■■□□□ 1.02
UBE2D4-208ENST00000454350 SLC27A2O14975 620 aa21.44■■□□□ 1.02
UBE2D4-208ENST00000454350 DDAH1O94760 285 aa21.44■■□□□ 1.02
UBE2D4-208ENST00000454350 F2P00734 622 aa21.44■■□□□ 1.02
UBE2D4-208ENST00000454350 RABGGTBP53611 331 aa21.44■■□□□ 1.02
UBE2D4-208ENST00000454350 PTGISQ16647 500 aa21.44■■□□□ 1.02
UBE2D4-208ENST00000454350 CELF3Q5SZQ8 465 aaKnown RBP21.44■■□□□ 1.02
UBE2D4-208ENST00000454350 SPZ1Q9BXG8 430 aa21.44■■□□□ 1.02
UBE2D4-208ENST00000454350 NKX2-4Q9H2Z4 354 aa21.44■■□□□ 1.02
UBE2D4-208ENST00000454350 SLC4A7Q9Y6M7 1214 aa21.44■■□□□ 1.02
UBE2D4-208ENST00000454350 SH2B2O14492 632 aaPredicted RBP21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 PRC1O43663 620 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 ZNF286BP0CG31 522 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 MYOGP15173 224 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 RFC2P35250 354 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 PSEN2P49810 448 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 CHMP4BP1P59074 171 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 MRPS9P82933 396 aaKnown RBP21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 RBL2Q08999 1139 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 TRAF1Q13077 416 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 ADGRE1Q14246 886 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 HIC1Q14526 733 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 HSDL1Q3SXM5 330 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 FCHSD1Q86WN1 690 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 DHX37Q8IY37 1157 aaKnown RBP21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 PRDM12Q9H4Q4 367 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 BCAS3Q9H6U6 928 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 HDAC6Q9UBN7 1215 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 GTF2IRD1Q9UHL9 959 aa21.43■■□□□ 1.02
UBE2D4-208ENST00000454350 MSRAQ9UJ68 235 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms