RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 STAM2O75886 525 aa16.63■□□□□ 0.25
SHANK2-210ENST00000449116 TDP2O95551 362 aa16.63■□□□□ 0.25
SHANK2-210ENST00000449116 XRCC5P13010 732 aaKnown RBP16.63■□□□□ 0.25
SHANK2-210ENST00000449116 FLT3LGP49771 235 aa16.63■□□□□ 0.25
SHANK2-210ENST00000449116 MRPS9P82933 396 aaKnown RBP16.63■□□□□ 0.25
SHANK2-210ENST00000449116 PDE4DQ08499 809 aa16.63■□□□□ 0.25
SHANK2-210ENST00000449116 ZNF174Q15697 407 aa16.63■□□□□ 0.25
SHANK2-210ENST00000449116 CEP55Q53EZ4 464 aa16.63■□□□□ 0.25
SHANK2-210ENST00000449116 MAMDC4Q6UXC1 1216 aa16.63■□□□□ 0.25
SHANK2-210ENST00000449116 ARMCX2Q7L311 632 aa16.63■□□□□ 0.25
SHANK2-210ENST00000449116 MSL3Q8N5Y2 521 aaKnown RBP16.63■□□□□ 0.25
SHANK2-210ENST00000449116 MBOAT7Q96N66 472 aa16.63■□□□□ 0.25
SHANK2-210ENST00000449116 USP28Q96RU2 1077 aa16.63■□□□□ 0.25
SHANK2-210ENST00000449116 SRRDQ9UH36 339 aa16.63■□□□□ 0.25
SHANK2-210ENST00000449116 DDX25Q9UHL0 483 aaKnown RBP16.63■□□□□ 0.25
SHANK2-210ENST00000449116 CFAP45Q9UL16 551 aa16.63■□□□□ 0.25
SHANK2-210ENST00000449116 GABRQQ9UN88 632 aa16.63■□□□□ 0.25
SHANK2-210ENST00000449116 DOCK3Q8IZD9 2030 aa16.63■□□□□ 0.25
SHANK2-210ENST00000449116 FAM86B1E9PN63 330 aa16.62■□□□□ 0.25
SHANK2-210ENST00000449116 EIF3JO75822 258 aaKnown RBP16.62■□□□□ 0.25
SHANK2-210ENST00000449116 FAM86B2P0C5J1 330 aa16.62■□□□□ 0.25
SHANK2-210ENST00000449116 MCM7P33993 719 aa16.62■□□□□ 0.25
SHANK2-210ENST00000449116 KRT85P78386 507 aa16.62■□□□□ 0.25
SHANK2-210ENST00000449116 SETQ01105 290 aaPredicted RBP16.62■□□□□ 0.25
SHANK2-210ENST00000449116 Q4G0T1 1027 aa16.62■□□□□ 0.25
SHANK2-210ENST00000449116 ANO1Q5XXA6 986 aa16.62■□□□□ 0.25
SHANK2-210ENST00000449116 OLFML2BQ68BL8 750 aa16.62■□□□□ 0.25
SHANK2-210ENST00000449116 ZFP91Q96JP5 570 aaPredicted RBP16.62■□□□□ 0.25
SHANK2-210ENST00000449116 MXRA8Q9BRK3 442 aa16.62■□□□□ 0.25
SHANK2-210ENST00000449116 TINF2Q9BSI4 451 aa16.62■□□□□ 0.25
SHANK2-210ENST00000449116 FTOQ9C0B1 505 aaKnown RBP eCLIP16.62■□□□□ 0.25
SHANK2-210ENST00000449116 POLR3EQ9NVU0 708 aa16.62■□□□□ 0.25
SHANK2-210ENST00000449116 RTEL1Q9NZ71 1219 aa16.62■□□□□ 0.25
SHANK2-210ENST00000449116 CEP131Q9UPN4 1083 aa16.62■□□□□ 0.25
SHANK2-210ENST00000449116 UBIAD1Q9Y5Z9 338 aa16.62■□□□□ 0.25
SHANK2-210ENST00000449116 DDX49Q9Y6V7 483 aaKnown RBP16.62■□□□□ 0.25
SHANK2-210ENST00000449116 PLXNA1Q9UIW2 1896 aa16.62■□□□□ 0.25
SHANK2-210ENST00000449116 SYNGAP1Q96PV0 1343 aa16.62■□□□□ 0.25
SHANK2-210ENST00000449116 MYH15Q9Y2K3 1946 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 IGLV3-22A0A075B6J6 115 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 MEIS1O00470 390 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 SLC37A4O43826 429 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 BMP15O95972 392 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 ITGB5P18084 799 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 NASPP49321 788 aaPredicted RBP16.61■□□□□ 0.25
SHANK2-210ENST00000449116 PRMT2P55345 433 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 CEBPZQ03701 1054 aaKnown RBP16.61■□□□□ 0.25
SHANK2-210ENST00000449116 IRF5Q13568 498 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 SF3A1Q15459 793 aaKnown RBP16.61■□□□□ 0.25
SHANK2-210ENST00000449116 GNPTABQ3T906 1256 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 PRR16Q569H4 304 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 NIPA1Q7RTP0 329 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 NLRX1Q86UT6 975 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 CYP2W1Q8TAV3 490 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 CHAMP1Q96JM3 812 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 INPP4AQ96PE3 977 aaPredicted RBP16.61■□□□□ 0.25
SHANK2-210ENST00000449116 JADE2Q9NQC1 790 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 CLIC4Q9Y696 253 aa16.61■□□□□ 0.25
SHANK2-210ENST00000449116 FOXN1O15353 648 aa16.6■□□□□ 0.25
SHANK2-210ENST00000449116 NEMFO60524 1076 aa16.6■□□□□ 0.25
SHANK2-210ENST00000449116 HSPA1AP0DMV8 641 aaKnown RBP16.6■□□□□ 0.25
SHANK2-210ENST00000449116 HSPA1BP0DMV9 641 aaKnown RBP16.6■□□□□ 0.25
SHANK2-210ENST00000449116 HSPA8P11142 646 aaKnown RBP16.6■□□□□ 0.25
SHANK2-210ENST00000449116 NCLP19338 710 aaKnown RBP16.6■□□□□ 0.25
SHANK2-210ENST00000449116 CCL14Q16627 93 aa16.6■□□□□ 0.25
SHANK2-210ENST00000449116 PLA2G4DQ86XP0 818 aa16.6■□□□□ 0.25
SHANK2-210ENST00000449116 POTEDQ86YR6 584 aa16.6■□□□□ 0.25
SHANK2-210ENST00000449116 TRMT44Q8IYL2 757 aaKnown RBP16.6■□□□□ 0.25
SHANK2-210ENST00000449116 LENG9Q96B70 501 aa16.6■□□□□ 0.25
SHANK2-210ENST00000449116 GPRASP2Q96D09 838 aa16.6■□□□□ 0.25
SHANK2-210ENST00000449116 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.6■□□□□ 0.25
SHANK2-210ENST00000449116 FLRT1Q9NZU1 646 aa16.6■□□□□ 0.25
SHANK2-210ENST00000449116 TFIP11Q9UBB9 837 aaKnown RBP16.6■□□□□ 0.25
SHANK2-210ENST00000449116 LRRC37A2A6NM11 1700 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 LAD1O00515 517 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 MAFGO15525 162 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 RGS20O76081 388 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 YEATS4O95619 227 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 IGHA2P01877 340 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 PTGDRQ13258 359 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 MTMR1Q13613 665 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 STK38Q15208 465 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 PTPAQ15257 358 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 CALCRLQ16602 461 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 OTOP1Q7RTM1 612 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 LINC00301Q8NCQ3 95 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 CDHR1Q96JP9 859 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 WDR11Q9BZH6 1224 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 VTA1Q9NP79 307 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 CNPY2Q9Y2B0 182 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 TRIM17Q9Y577 477 aa16.59■□□□□ 0.25
SHANK2-210ENST00000449116 CASP8AP2Q9UKL3 1982 aa16.58■□□□□ 0.25
SHANK2-210ENST00000449116 TBX3O15119 743 aa16.58■□□□□ 0.24
SHANK2-210ENST00000449116 BAG4O95429 457 aaKnown RBP16.58■□□□□ 0.24
SHANK2-210ENST00000449116 SNAI1O95863 264 aaPredicted RBP16.58■□□□□ 0.24
SHANK2-210ENST00000449116 CTCFP49711 727 aaPredicted RBP16.58■□□□□ 0.24
SHANK2-210ENST00000449116 ATP2C1P98194 919 aaPredicted RBP16.58■□□□□ 0.24
SHANK2-210ENST00000449116 SLC39A14Q15043 492 aa16.58■□□□□ 0.24
SHANK2-210ENST00000449116 CLEC17AQ6ZS10 378 aa16.58■□□□□ 0.24
SHANK2-210ENST00000449116 SEPT14Q6ZU15 432 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms