RNA–Protein interactions for RNA: ENST00000398652.7

FAM3B-204, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 1 (best) BASIC

Gene FAM3B, Length 1,125 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-204ENST00000398652 COL4A6Q14031 1691 aa16.34■□□□□ 0.21
FAM3B-204ENST00000398652 CKBP12277 381 aa16.34■□□□□ 0.21
FAM3B-204ENST00000398652 TDO2P48775 406 aa16.34■□□□□ 0.21
FAM3B-204ENST00000398652 RCSD1Q6JBY9 416 aa16.34■□□□□ 0.21
FAM3B-204ENST00000398652 SP7Q8TDD2 431 aaPredicted RBP16.34■□□□□ 0.21
FAM3B-204ENST00000398652 CHMP4CQ96CF2 233 aa16.34■□□□□ 0.21
FAM3B-204ENST00000398652 POP1Q99575 1024 aaKnown RBP16.34■□□□□ 0.21
FAM3B-204ENST00000398652 NSUN3Q9H649 340 aaKnown RBP16.34■□□□□ 0.21
FAM3B-204ENST00000398652 EPB41L4AQ9HCS5 686 aaPredicted RBP16.34■□□□□ 0.21
FAM3B-204ENST00000398652 CFAP54Q96N23 3096 aa16.33■□□□□ 0.21
FAM3B-204ENST00000398652 NFIBO00712 420 aa16.33■□□□□ 0.2
FAM3B-204ENST00000398652 TXNP10599 105 aaKnown RBP16.33■□□□□ 0.2
FAM3B-204ENST00000398652 CHRM1P11229 460 aaPredicted RBP16.33■□□□□ 0.2
FAM3B-204ENST00000398652 HTRA4P83105 476 aaPredicted RBP16.33■□□□□ 0.2
FAM3B-204ENST00000398652 PDE4DQ08499 809 aa16.33■□□□□ 0.2
FAM3B-204ENST00000398652 EPC2Q52LR7 807 aa16.33■□□□□ 0.2
FAM3B-204ENST00000398652 BMP8AQ7Z5Y6 402 aa16.33■□□□□ 0.2
FAM3B-204ENST00000398652 MPHOSPH6Q99547 160 aaKnown RBP16.33■□□□□ 0.2
FAM3B-204ENST00000398652 CLDND1Q9NY35 253 aa16.33■□□□□ 0.2
FAM3B-204ENST00000398652 C5orf42Q9H799 3197 aa16.33■□□□□ 0.2
FAM3B-204ENST00000398652 PTPDC1A2A3K4 754 aa16.32■□□□□ 0.2
FAM3B-204ENST00000398652 H3BNC9 293 aa16.32■□□□□ 0.2
FAM3B-204ENST00000398652 AMHP03971 560 aa16.32■□□□□ 0.2
FAM3B-204ENST00000398652 EDNRBP24530 442 aa16.32■□□□□ 0.2
FAM3B-204ENST00000398652 SMAD2Q15796 467 aaKnown RBP16.32■□□□□ 0.2
FAM3B-204ENST00000398652 PPP4R3BQ5MIZ7 849 aa16.32■□□□□ 0.2
FAM3B-204ENST00000398652 SLC30A10Q6XR72 485 aa16.32■□□□□ 0.2
FAM3B-204ENST00000398652 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.32■□□□□ 0.2
FAM3B-204ENST00000398652 EDAQ92838 391 aa16.32■□□□□ 0.2
FAM3B-204ENST00000398652 RANBP17Q9H2T7 1088 aaKnown RBP16.32■□□□□ 0.2
FAM3B-204ENST00000398652 MYH7BA7E2Y1 1941 aa16.31■□□□□ 0.2
FAM3B-204ENST00000398652 ZFHX2Q9C0A1 2572 aaPredicted RBP16.31■□□□□ 0.2
FAM3B-204ENST00000398652 NCK2O43639 380 aa16.31■□□□□ 0.2
FAM3B-204ENST00000398652 LGR5O75473 907 aa16.31■□□□□ 0.2
FAM3B-204ENST00000398652 MMP3P08254 477 aa16.31■□□□□ 0.2
FAM3B-204ENST00000398652 CALML3P27482 149 aa16.31■□□□□ 0.2
FAM3B-204ENST00000398652 TFAP4Q01664 338 aa16.31■□□□□ 0.2
FAM3B-204ENST00000398652 PDE4BQ07343 736 aa16.31■□□□□ 0.2
FAM3B-204ENST00000398652 GPM6BQ13491 265 aa16.31■□□□□ 0.2
FAM3B-204ENST00000398652 PKN1Q16512 942 aa16.31■□□□□ 0.2
FAM3B-204ENST00000398652 IER5LQ5T953 404 aa16.31■□□□□ 0.2
FAM3B-204ENST00000398652 TRAF7Q6Q0C0 670 aa16.31■□□□□ 0.2
FAM3B-204ENST00000398652 RASGRP2Q7LDG7 609 aa16.31■□□□□ 0.2
FAM3B-204ENST00000398652 RNF135Q8IUD6 432 aa16.31■□□□□ 0.2
FAM3B-204ENST00000398652 KAT2BQ92831 832 aa16.31■□□□□ 0.2
FAM3B-204ENST00000398652 GTF2IRD1Q9UHL9 959 aa16.31■□□□□ 0.2
FAM3B-204ENST00000398652 PTPRZ1P23471 2315 aaPredicted RBP16.3■□□□□ 0.2
FAM3B-204ENST00000398652 GFRA3O60609 400 aa16.3■□□□□ 0.2
FAM3B-204ENST00000398652 RAB11FIP3O75154 756 aa16.3■□□□□ 0.2
FAM3B-204ENST00000398652 ARIH2O95376 493 aa16.3■□□□□ 0.2
FAM3B-204ENST00000398652 GNAT2P19087 354 aa16.3■□□□□ 0.2
FAM3B-204ENST00000398652 LTBRP36941 435 aa16.3■□□□□ 0.2
FAM3B-204ENST00000398652 TCF15Q12870 199 aa16.3■□□□□ 0.2
FAM3B-204ENST00000398652 MBTPS1Q14703 1052 aa16.3■□□□□ 0.2
FAM3B-204ENST00000398652 RNF207Q6ZRF8 634 aa16.3■□□□□ 0.2
FAM3B-204ENST00000398652 RPAINQ86UA6 219 aa16.3■□□□□ 0.2
FAM3B-204ENST00000398652 MYOCDQ8IZQ8 938 aa16.3■□□□□ 0.2
FAM3B-204ENST00000398652 AFG1LQ8WV93 481 aa16.3■□□□□ 0.2
FAM3B-204ENST00000398652 APPBP2Q92624 585 aa16.3■□□□□ 0.2
FAM3B-204ENST00000398652 OSBP2Q969R2 916 aa16.3■□□□□ 0.2
FAM3B-204ENST00000398652 STX8Q9UNK0 236 aa16.3■□□□□ 0.2
FAM3B-204ENST00000398652 EMSYQ7Z589 1322 aa16.29■□□□□ 0.2
FAM3B-204ENST00000398652 GPAA1O43292 621 aa16.29■□□□□ 0.2
FAM3B-204ENST00000398652 APPP05067 770 aa16.29■□□□□ 0.2
FAM3B-204ENST00000398652 PTK7Q13308 1070 aa16.29■□□□□ 0.2
FAM3B-204ENST00000398652 TRIM71Q2Q1W2 868 aaKnown RBP16.29■□□□□ 0.2
FAM3B-204ENST00000398652 ZNF618Q5T7W0 954 aa16.29■□□□□ 0.2
FAM3B-204ENST00000398652 FBXO11Q86XK2 927 aa16.29■□□□□ 0.2
FAM3B-204ENST00000398652 SUGP1Q8IWZ8 645 aaKnown RBP16.29■□□□□ 0.2
FAM3B-204ENST00000398652 C7orf31Q8N865 590 aa16.29■□□□□ 0.2
FAM3B-204ENST00000398652 DNERQ8NFT8 737 aa16.29■□□□□ 0.2
FAM3B-204ENST00000398652 PBXIP1Q96AQ6 731 aa16.29■□□□□ 0.2
FAM3B-204ENST00000398652 PLXNA3P51805 1871 aa16.29■□□□□ 0.2
FAM3B-204ENST00000398652 TMEM221A6NGB7 291 aa16.28■□□□□ 0.2
FAM3B-204ENST00000398652 B4DLN1 442 aa16.28■□□□□ 0.2
FAM3B-204ENST00000398652 M0R296 226 aa16.28■□□□□ 0.2
FAM3B-204ENST00000398652 MBTPS2O43462 519 aa16.28■□□□□ 0.2
FAM3B-204ENST00000398652 HMMRO75330 724 aa16.28■□□□□ 0.2
FAM3B-204ENST00000398652 SLC3A2P08195 630 aaKnown RBP16.28■□□□□ 0.2
FAM3B-204ENST00000398652 CASTP20810 708 aaKnown RBP16.28■□□□□ 0.2
FAM3B-204ENST00000398652 MRPL12P52815 198 aaKnown RBP16.28■□□□□ 0.2
FAM3B-204ENST00000398652 CCDC96Q2M329 555 aa16.28■□□□□ 0.2
FAM3B-204ENST00000398652 CTC1Q2NKJ3 1217 aa16.28■□□□□ 0.2
FAM3B-204ENST00000398652 TRIM67Q6ZTA4 783 aa16.28■□□□□ 0.2
FAM3B-204ENST00000398652 TMEM192Q8IY95 271 aa16.28■□□□□ 0.2
FAM3B-204ENST00000398652 IFNL3Q8IZI9 196 aa16.28■□□□□ 0.2
FAM3B-204ENST00000398652 CLEC4DQ8WXI8 215 aa16.28■□□□□ 0.2
FAM3B-204ENST00000398652 YME1L1Q96TA2 773 aa16.28■□□□□ 0.2
FAM3B-204ENST00000398652 HDAC6Q9UBN7 1215 aa16.28■□□□□ 0.2
FAM3B-204ENST00000398652 GH1P01241 217 aa16.27■□□□□ 0.2
FAM3B-204ENST00000398652 RPS6P62753 249 aaKnown RBP16.27■□□□□ 0.2
FAM3B-204ENST00000398652 ARHGAP1Q07960 439 aa16.27■□□□□ 0.2
FAM3B-204ENST00000398652 SMAD4Q13485 552 aaKnown RBP16.27■□□□□ 0.2
FAM3B-204ENST00000398652 CLUL1Q15846 466 aa16.27■□□□□ 0.2
FAM3B-204ENST00000398652 CCDC62Q6P9F0 684 aa16.27■□□□□ 0.2
FAM3B-204ENST00000398652 BTNL9Q6UXG8 535 aa16.27■□□□□ 0.2
FAM3B-204ENST00000398652 DBF4BQ8NFT6 615 aa16.27■□□□□ 0.2
FAM3B-204ENST00000398652 DCAF4Q8WV16 495 aa16.27■□□□□ 0.2
FAM3B-204ENST00000398652 WNT8BQ93098 351 aa16.27■□□□□ 0.2
FAM3B-204ENST00000398652 KATNAL1Q9BW62 490 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms