RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 RMND1Q9NWS8 449 aa22.68■■□□□ 1.22
TMEFF1-201ENST00000374879 RAB27AP51159 221 aa22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 C2CD5Q86YS7 1000 aa22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 SYNE4Q8N205 404 aa22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 ZBTB38Q8NAP3 1195 aaPredicted RBP22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 ZKSCAN3Q9BRR0 538 aa22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 IQSEC3Q9UPP2 1182 aaPredicted RBP22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 RAD51CO43502 376 aa22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 CSF1RP07333 972 aa22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 CTNNA1P35221 906 aaKnown RBP22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 EIF4A3P38919 411 aaKnown RBP22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 RPS6KA3P51812 740 aa22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 HLTFQ14527 1009 aaKnown RBP eCLIP22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 DNAJC10Q8IXB1 793 aa22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 NOP53Q9NZM5 478 aaKnown RBP22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 SLC12A4Q9UP95 1085 aa22.67■■□□□ 1.22
TMEFF1-201ENST00000374879 ERICH2A1L162 156 aa22.66■■□□□ 1.22
TMEFF1-201ENST00000374879 BIRC3Q13489 604 aa22.66■■□□□ 1.22
TMEFF1-201ENST00000374879 CCHCR1Q8TD31 782 aa22.66■■□□□ 1.22
TMEFF1-201ENST00000374879 BORCS6Q96GS4 357 aa22.66■■□□□ 1.22
TMEFF1-201ENST00000374879 SLC5A4Q9NY91 659 aa22.66■■□□□ 1.22
TMEFF1-201ENST00000374879 TRAF1Q13077 416 aa22.66■■□□□ 1.22
TMEFF1-201ENST00000374879 PTGDRQ13258 359 aa22.66■■□□□ 1.22
TMEFF1-201ENST00000374879 METTL24Q5JXM2 366 aa22.66■■□□□ 1.22
TMEFF1-201ENST00000374879 PLA2G12BQ9BX93 195 aa22.66■■□□□ 1.22
TMEFF1-201ENST00000374879 IRAK4Q9NWZ3 460 aa22.66■■□□□ 1.22
TMEFF1-201ENST00000374879 TACC3Q9Y6A5 838 aa22.66■■□□□ 1.22
TMEFF1-201ENST00000374879 LINGO3P0C6S8 592 aa22.65■■□□□ 1.22
TMEFF1-201ENST00000374879 MAGOHP61326 146 aaKnown RBP22.65■■□□□ 1.22
TMEFF1-201ENST00000374879 CCDC197Q8NCU1 140 aa22.65■■□□□ 1.22
TMEFF1-201ENST00000374879 ITFG2Q969R8 447 aa22.65■■□□□ 1.22
TMEFF1-201ENST00000374879 MAGOHBQ96A72 148 aaKnown RBP22.65■■□□□ 1.22
TMEFF1-201ENST00000374879 ASAP1Q9ULH1 1129 aa22.65■■□□□ 1.22
TMEFF1-201ENST00000374879 MAGEA1P43355 309 aa22.65■■□□□ 1.22
TMEFF1-201ENST00000374879 MDM1Q8TC05 714 aa22.65■■□□□ 1.22
TMEFF1-201ENST00000374879 SOS2Q07890 1332 aaPredicted RBP22.64■■□□□ 1.22
TMEFF1-201ENST00000374879 AKR1B10O60218 316 aa22.64■■□□□ 1.22
TMEFF1-201ENST00000374879 ECHS1P30084 290 aa22.64■■□□□ 1.22
TMEFF1-201ENST00000374879 MCAMP43121 646 aa22.64■■□□□ 1.22
TMEFF1-201ENST00000374879 EVA1CP58658 441 aa22.64■■□□□ 1.22
TMEFF1-201ENST00000374879 LDHAL6AQ6ZMR3 332 aa22.64■■□□□ 1.22
TMEFF1-201ENST00000374879 RUFY4Q6ZNE9 571 aa22.64■■□□□ 1.22
TMEFF1-201ENST00000374879 CCDC155Q8N6L0 562 aa22.64■■□□□ 1.22
TMEFF1-201ENST00000374879 LPIN2Q92539 896 aa22.64■■□□□ 1.22
TMEFF1-201ENST00000374879 CHMP6Q96FZ7 201 aa22.64■■□□□ 1.22
TMEFF1-201ENST00000374879 PLAGL2Q9UPG8 496 aa22.64■■□□□ 1.22
TMEFF1-201ENST00000374879 SHANK3Q9BYB0 1731 aa22.64■■□□□ 1.22
TMEFF1-201ENST00000374879 NKRFO15226 690 aaKnown RBP eCLIP22.64■■□□□ 1.21
TMEFF1-201ENST00000374879 RASSF7Q02833 373 aa22.64■■□□□ 1.21
TMEFF1-201ENST00000374879 SLMAPQ14BN4 828 aa22.64■■□□□ 1.21
TMEFF1-201ENST00000374879 KLHL7Q8IXQ5 586 aa22.64■■□□□ 1.21
TMEFF1-201ENST00000374879 RNF14Q9UBS8 474 aa22.64■■□□□ 1.21
TMEFF1-201ENST00000374879 UPP2O95045 317 aa22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 ERVK-9P63128 1117 aa22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 FAM133BQ5BKY9 247 aaKnown RBP22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 NUP133Q8WUM0 1156 aa22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 RIC1Q4ADV7 1423 aa22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 ABCC12Q96J65 1359 aa22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 hCG_1642624A0A1W2PR95 340 aa22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 CAND2O75155 1236 aa22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 LCA5LO95447 670 aa22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 ITGA6P23229 1130 aa22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 BLMHQ13867 455 aa22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 ZNF268Q14587 947 aaPredicted RBP22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 KCTD19Q17RG1 926 aaPredicted RBP22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 DDX42Q86XP3 938 aaKnown RBP eCLIP22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 GREM2Q9H772 168 aa22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 KCNMB3Q9NPA1 279 aa22.63■■□□□ 1.21
TMEFF1-201ENST00000374879 A0A1W2PQJ5 194 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 EIF4E1BA6NMX2 242 aaKnown RBP22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 PRDM1O75626 825 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 GSTA1P08263 222 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 ADD2P35612 726 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 KRT2P35908 639 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 IL17AQ16552 155 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 AGBL2Q5U5Z8 902 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 TTI2Q6NXR4 508 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 NOX5Q96PH1 765 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 ISCUQ9H1K1 167 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 LRRC4CQ9HCJ2 640 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 EPHB6O15197 1021 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 TMC4Q7Z404 712 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 CSGALNACT2Q8N6G5 542 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 DUSP9Q99956 384 aaKnown RBP22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 FAM167BQ9BTA0 163 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 AGAP1Q9UPQ3 857 aa22.62■■□□□ 1.21
TMEFF1-201ENST00000374879 ABL2P42684 1182 aa22.61■■□□□ 1.21
TMEFF1-201ENST00000374879 ATP2C1P98194 919 aaPredicted RBP22.61■■□□□ 1.21
TMEFF1-201ENST00000374879 HLFQ16534 295 aa22.61■■□□□ 1.21
TMEFF1-201ENST00000374879 MIIPQ5JXC2 388 aa22.61■■□□□ 1.21
TMEFF1-201ENST00000374879 TTC38Q5R3I4 469 aa22.61■■□□□ 1.21
TMEFF1-201ENST00000374879 SPICE1Q8N0Z3 855 aa22.61■■□□□ 1.21
TMEFF1-201ENST00000374879 UBLCP1Q8WVY7 318 aaPredicted RBP22.61■■□□□ 1.21
TMEFF1-201ENST00000374879 A6NHS1 94 aa22.61■■□□□ 1.21
TMEFF1-201ENST00000374879 STARD3NLO95772 234 aa22.61■■□□□ 1.21
TMEFF1-201ENST00000374879 FTCDO95954 541 aa22.61■■□□□ 1.21
TMEFF1-201ENST00000374879 FESP07332 822 aa22.61■■□□□ 1.21
TMEFF1-201ENST00000374879 ALADP13716 330 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms