RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 CAMSAP1Q5T5Y3 1602 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 RIMBP3Q9UFD9 1639 aa6.35□□□□□ -1.39
USP48-202ENST00000374730 MPOP05164 745 aa6.34□□□□□ -1.39
USP48-202ENST00000374730 PRKCAP17252 672 aa6.34□□□□□ -1.39
USP48-202ENST00000374730 CASP7P55210 303 aa6.34□□□□□ -1.39
USP48-202ENST00000374730 GNPTABQ3T906 1256 aa6.34□□□□□ -1.39
USP48-202ENST00000374730 C9orf131Q5VYM1 1079 aa6.34□□□□□ -1.39
USP48-202ENST00000374730 NUP43Q8NFH3 380 aa6.34□□□□□ -1.39
USP48-202ENST00000374730 SHDQ96IW2 340 aa6.34□□□□□ -1.39
USP48-202ENST00000374730 GBP3Q9H0R5 595 aa6.34□□□□□ -1.39
USP48-202ENST00000374730 NOL6Q9H6R4 1146 aaKnown RBP6.34□□□□□ -1.39
USP48-202ENST00000374730 FAM86C1Q9NVL1 165 aa6.34□□□□□ -1.39
USP48-202ENST00000374730 IMPACTQ9P2X3 320 aa6.34□□□□□ -1.39
USP48-202ENST00000374730 MBD1Q9UIS9 605 aaPredicted RBP6.34□□□□□ -1.39
USP48-202ENST00000374730 PIK3C2BO00750 1634 aa6.34□□□□□ -1.39
USP48-202ENST00000374730 CD109Q6YHK3 1445 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 EIF3AQ14152 1382 aaKnown RBP6.33□□□□□ -1.4
USP48-202ENST00000374730 RNF123Q5XPI4 1314 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 GLI2P10070 1586 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 UGGT1Q9NYU2 1555 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 DIP2CQ9Y2E4 1556 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 NUAK1O60285 661 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 VIPR1P32241 457 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 CORO7P57737 925 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 TMF1P82094 1093 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 CYP4F8P98187 520 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 SLC7A5Q01650 507 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 KIR3DS1Q14943 382 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 LCE1DQ5T752 114 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 FCRL3Q96P31 734 aaPredicted RBP6.33□□□□□ -1.4
USP48-202ENST00000374730 CCSER2Q9H7U1 834 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 SIRT5Q9NXA8 310 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 NUDCQ9Y266 331 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 ABCC3O15438 1527 aa6.33□□□□□ -1.4
USP48-202ENST00000374730 BLMP54132 1417 aaPredicted RBP6.33□□□□□ -1.4
USP48-202ENST00000374730 E9PSI1 815 aa6.32□□□□□ -1.4
USP48-202ENST00000374730 RFXAPO00287 272 aa6.32□□□□□ -1.4
USP48-202ENST00000374730 CD3EP07766 207 aa6.32□□□□□ -1.4
USP48-202ENST00000374730 HEATR6Q6AI08 1181 aaKnown RBP6.32□□□□□ -1.4
USP48-202ENST00000374730 ZDHHC15Q96MV8 337 aa6.32□□□□□ -1.4
USP48-202ENST00000374730 SGPP1Q9BX95 441 aa6.32□□□□□ -1.4
USP48-202ENST00000374730 KLHL14Q9P2G3 628 aa6.32□□□□□ -1.4
USP48-202ENST00000374730 CNOT6Q9ULM6 557 aaKnown RBP6.32□□□□□ -1.4
USP48-202ENST00000374730 INPP5FQ9Y2H2 1132 aa6.32□□□□□ -1.4
USP48-202ENST00000374730 SIGLEC1Q9BZZ2 1709 aa6.32□□□□□ -1.4
USP48-202ENST00000374730 NPC1L1Q9UHC9 1359 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 SBNO2Q9Y2G9 1366 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 ASXL1Q8IXJ9 1541 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 N4BP3O15049 544 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 KIF3BO15066 747 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 PPM1BO75688 479 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 IFNGR1P15260 489 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 SDHBP21912 280 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 MVKQ03426 396 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 CBX2Q14781 532 aaPredicted RBP6.31□□□□□ -1.4
USP48-202ENST00000374730 ZNF385BQ569K4 471 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 CYB5RLQ6IPT4 315 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 RCSD1Q6JBY9 416 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 JAMLQ86YT9 394 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 CPLX3Q8WVH0 158 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 KLHL6Q8WZ60 621 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 SIGLEC10Q96LC7 697 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 PTCHD1Q96NR3 888 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 ACBD3Q9H3P7 528 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 CNTD2Q9H8S5 307 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 RAPGEFL1Q9UHV5 662 aa6.31□□□□□ -1.4
USP48-202ENST00000374730 QRICH2Q9H0J4 1663 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 USP32Q8NFA0 1604 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 A0A1W2PQ27 194 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 A0A1W2PQ64 194 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 A0A1W2PQC6 194 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 A0A1W2PQD8 194 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 IRS4O14654 1257 aaPredicted RBP6.3□□□□□ -1.4
USP48-202ENST00000374730 SRGAP3O43295 1099 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 TBC1D8O95759 1140 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 EPHX1P07099 455 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 RBM25P49756 843 aaKnown RBP6.3□□□□□ -1.4
USP48-202ENST00000374730 RBM10P98175 930 aaKnown RBP6.3□□□□□ -1.4
USP48-202ENST00000374730 GRB10Q13322 594 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 NR1I3Q14994 352 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 RAB3GAP1Q15042 981 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 EEF1DP3Q658K8 133 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 TMEM151BQ8IW70 566 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 ADCY4Q8NFM4 1077 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 RCC1LQ96I51 464 aaKnown RBP6.3□□□□□ -1.4
USP48-202ENST00000374730 PCDHB10Q9UN67 800 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 KCTD3Q9Y597 815 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 IRAK3Q9Y616 596 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 NPATQ14207 1427 aa6.3□□□□□ -1.4
USP48-202ENST00000374730 CFAP65Q6ZU64 1925 aaKnown RBP6.3□□□□□ -1.4
USP48-202ENST00000374730 ERVK-7P63135 1459 aa6.29□□□□□ -1.4
USP48-202ENST00000374730 ADGRB1O14514 1584 aa6.29□□□□□ -1.4
USP48-202ENST00000374730 AURKAO14965 403 aa6.29□□□□□ -1.4
USP48-202ENST00000374730 PIK3C2GO75747 1445 aa6.29□□□□□ -1.4
USP48-202ENST00000374730 NOS1P29475 1434 aa6.29□□□□□ -1.4
USP48-202ENST00000374730 SSPNQ14714 243 aa6.29□□□□□ -1.4
USP48-202ENST00000374730 PPP2R5DQ14738 602 aa6.29□□□□□ -1.4
USP48-202ENST00000374730 PPP2R5EQ16537 467 aa6.29□□□□□ -1.4
USP48-202ENST00000374730 ARHGAP31Q2M1Z3 1444 aa6.29□□□□□ -1.4
USP48-202ENST00000374730 ARHGEF39Q8N4T4 335 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms