RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 PGBD1Q96JS3 809 aa27■■□□□ 1.91
HOMER3-201ENST00000221222 HMX1Q9NP08 348 aaPredicted RBP27■■□□□ 1.91
HOMER3-201ENST00000221222 EIF3JO75822 258 aaKnown RBP26.99■■□□□ 1.91
HOMER3-201ENST00000221222 KRT2P35908 639 aa26.99■■□□□ 1.91
HOMER3-201ENST00000221222 SREBF1P36956 1147 aa26.99■■□□□ 1.91
HOMER3-201ENST00000221222 FOSBP53539 338 aa26.99■■□□□ 1.91
HOMER3-201ENST00000221222 PRAMEF19Q5SWL8 479 aa26.99■■□□□ 1.91
HOMER3-201ENST00000221222 BRMS1Q9HCU9 246 aa26.99■■□□□ 1.91
HOMER3-201ENST00000221222 FBXO16Q8IX29 292 aaPredicted RBP26.98■■□□□ 1.91
HOMER3-201ENST00000221222 OXER1Q8TDS5 423 aa26.98■■□□□ 1.91
HOMER3-201ENST00000221222 CRYGNQ8WXF5 182 aa26.98■■□□□ 1.91
HOMER3-201ENST00000221222 STAM2O75886 525 aa26.97■■□□□ 1.91
HOMER3-201ENST00000221222 GJB1P08034 283 aa26.97■■□□□ 1.91
HOMER3-201ENST00000221222 MYCLP12524 364 aaPredicted RBP26.97■■□□□ 1.91
HOMER3-201ENST00000221222 CCND3P30281 292 aaPredicted RBP26.97■■□□□ 1.91
HOMER3-201ENST00000221222 MRPS9P82933 396 aaKnown RBP26.97■■□□□ 1.91
HOMER3-201ENST00000221222 TAPT1Q6NXT6 567 aa26.97■■□□□ 1.91
HOMER3-201ENST00000221222 DIS3L2Q8IYB7 885 aaKnown RBP26.97■■□□□ 1.91
HOMER3-201ENST00000221222 ZHX1Q9UKY1 873 aaPredicted RBP26.97■■□□□ 1.91
HOMER3-201ENST00000221222 RBM47A0AV96 593 aaKnown RBP26.97■■□□□ 1.91
HOMER3-201ENST00000221222 GJA8P48165 433 aa26.97■■□□□ 1.91
HOMER3-201ENST00000221222 GUCY1B3Q02153 619 aa26.97■■□□□ 1.91
HOMER3-201ENST00000221222 BECN1Q14457 450 aa26.97■■□□□ 1.91
HOMER3-201ENST00000221222 EEPD1Q7L9B9 569 aa26.97■■□□□ 1.91
HOMER3-201ENST00000221222 KRT25Q7Z3Z0 450 aa26.97■■□□□ 1.91
HOMER3-201ENST00000221222 TNFRSF25Q93038 417 aa26.97■■□□□ 1.91
HOMER3-201ENST00000221222 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.97■■□□□ 1.91
HOMER3-201ENST00000221222 PAK6Q9NQU5 681 aaPredicted RBP26.97■■□□□ 1.91
HOMER3-201ENST00000221222 SEPT4O43236 478 aa26.96■■□□□ 1.91
HOMER3-201ENST00000221222 ARHGAP4P98171 946 aa26.96■■□□□ 1.91
HOMER3-201ENST00000221222 SAFBQ15424 915 aaKnown RBP eCLIP26.96■■□□□ 1.91
HOMER3-201ENST00000221222 FRMPD3Q5JV73 1810 aa26.95■■□□□ 1.9
HOMER3-201ENST00000221222 BTBD18B2RXH4 712 aa26.95■■□□□ 1.9
HOMER3-201ENST00000221222 RGS20O76081 388 aa26.95■■□□□ 1.9
HOMER3-201ENST00000221222 CYP3A4P08684 503 aa26.95■■□□□ 1.9
HOMER3-201ENST00000221222 PDCP20941 246 aa26.95■■□□□ 1.9
HOMER3-201ENST00000221222 NR5A1Q13285 461 aa26.95■■□□□ 1.9
HOMER3-201ENST00000221222 CCDC144BQ3MJ40 725 aa26.95■■□□□ 1.9
HOMER3-201ENST00000221222 HABP4Q5JVS0 413 aaKnown RBP26.95■■□□□ 1.9
HOMER3-201ENST00000221222 U2AF1L4Q8WU68 220 aaKnown RBP26.95■■□□□ 1.9
HOMER3-201ENST00000221222 INPP4AQ96PE3 977 aaPredicted RBP26.95■■□□□ 1.9
HOMER3-201ENST00000221222 FOXD4L1Q9NU39 408 aa26.95■■□□□ 1.9
HOMER3-201ENST00000221222 FAM184BQ9ULE4 1060 aa26.95■■□□□ 1.9
HOMER3-201ENST00000221222 HSP90AA1P07900 732 aaKnown RBP26.94■■□□□ 1.9
HOMER3-201ENST00000221222 AKR1A1P14550 325 aa26.94■■□□□ 1.9
HOMER3-201ENST00000221222 CNGA1P29973 690 aa26.94■■□□□ 1.9
HOMER3-201ENST00000221222 NONOQ15233 471 aaKnown RBP eCLIP26.94■■□□□ 1.9
HOMER3-201ENST00000221222 LARP1BQ659C4 914 aaKnown RBP26.94■■□□□ 1.9
HOMER3-201ENST00000221222 FOXP1Q9H334 677 aaPredicted RBP26.94■■□□□ 1.9
HOMER3-201ENST00000221222 PDGFCQ9NRA1 345 aa26.94■■□□□ 1.9
HOMER3-201ENST00000221222 CCDC194A0A1B0GVG4 234 aa26.93■■□□□ 1.9
HOMER3-201ENST00000221222 H0YGN5 161 aa26.93■■□□□ 1.9
HOMER3-201ENST00000221222 MSCO60682 206 aa26.93■■□□□ 1.9
HOMER3-201ENST00000221222 IQSEC1Q6DN90 963 aa26.93■■□□□ 1.9
HOMER3-201ENST00000221222 TBCKQ8TEA7 893 aa26.93■■□□□ 1.9
HOMER3-201ENST00000221222 SCFD2Q8WU76 684 aa26.93■■□□□ 1.9
HOMER3-201ENST00000221222 DPF3Q92784 378 aa26.93■■□□□ 1.9
HOMER3-201ENST00000221222 DDX20Q9UHI6 824 aaKnown RBP26.93■■□□□ 1.9
HOMER3-201ENST00000221222 UBIAD1Q9Y5Z9 338 aa26.93■■□□□ 1.9
HOMER3-201ENST00000221222 ADCYAP1R1P41586 468 aa26.92■■□□□ 1.9
HOMER3-201ENST00000221222 USP11P51784 963 aa26.92■■□□□ 1.9
HOMER3-201ENST00000221222 GNPTABQ3T906 1256 aa26.92■■□□□ 1.9
HOMER3-201ENST00000221222 ZFP91Q96JP5 570 aaPredicted RBP26.92■■□□□ 1.9
HOMER3-201ENST00000221222 H3BQV1 296 aa26.91■■□□□ 1.9
HOMER3-201ENST00000221222 FARP2O94887 1054 aaPredicted RBP26.91■■□□□ 1.9
HOMER3-201ENST00000221222 ITGB5P18084 799 aa26.91■■□□□ 1.9
HOMER3-201ENST00000221222 EARS2Q5JPH6 523 aaKnown RBP26.91■■□□□ 1.9
HOMER3-201ENST00000221222 SEPT14Q6ZU15 432 aa26.91■■□□□ 1.9
HOMER3-201ENST00000221222 PIK3AP1Q6ZUJ8 805 aa26.91■■□□□ 1.9
HOMER3-201ENST00000221222 DEFB118Q96PH6 123 aa26.91■■□□□ 1.9
HOMER3-201ENST00000221222 WDR11Q9BZH6 1224 aa26.91■■□□□ 1.9
HOMER3-201ENST00000221222 RTEL1Q9NZ71 1219 aa26.91■■□□□ 1.9
HOMER3-201ENST00000221222 EDIL3O43854 480 aa26.9■■□□□ 1.9
HOMER3-201ENST00000221222 U2AF2P26368 475 aaKnown RBP eCLIP26.9■■□□□ 1.94e-7■■■□□ 17.8
HOMER3-201ENST00000221222 ICAM3P32942 547 aa26.9■■□□□ 1.9
HOMER3-201ENST00000221222 CIITAP33076 1130 aa26.9■■□□□ 1.9
HOMER3-201ENST00000221222 TNFAIP2Q03169 654 aa26.9■■□□□ 1.9
HOMER3-201ENST00000221222 TTLL4Q14679 1199 aa26.9■■□□□ 1.9
HOMER3-201ENST00000221222 LHX8Q68G74 356 aa26.9■■□□□ 1.9
HOMER3-201ENST00000221222 CCDC62Q6P9F0 684 aa26.9■■□□□ 1.9
HOMER3-201ENST00000221222 KCNV1Q6PIU1 500 aa26.9■■□□□ 1.9
HOMER3-201ENST00000221222 NLRX1Q86UT6 975 aa26.9■■□□□ 1.9
HOMER3-201ENST00000221222 GPRASP2Q96D09 838 aa26.9■■□□□ 1.9
HOMER3-201ENST00000221222 MXRA8Q9BRK3 442 aa26.9■■□□□ 1.9
HOMER3-201ENST00000221222 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.89■■□□□ 1.9
HOMER3-201ENST00000221222 ADCY6O43306 1168 aa26.89■■□□□ 1.9
HOMER3-201ENST00000221222 SGPL1O95470 568 aa26.89■■□□□ 1.9
HOMER3-201ENST00000221222 TGFB3P10600 412 aa26.89■■□□□ 1.9
HOMER3-201ENST00000221222 SYT1P21579 422 aa26.89■■□□□ 1.9
HOMER3-201ENST00000221222 INF2Q27J81 1249 aa26.89■■□□□ 1.9
HOMER3-201ENST00000221222 DUSP28Q4G0W2 176 aa26.89■■□□□ 1.9
HOMER3-201ENST00000221222 CEP55Q53EZ4 464 aa26.89■■□□□ 1.9
HOMER3-201ENST00000221222 NIPA1Q7RTP0 329 aa26.89■■□□□ 1.9
HOMER3-201ENST00000221222 JADE2Q9NQC1 790 aa26.89■■□□□ 1.9
HOMER3-201ENST00000221222 SPATA31C2B4DYI2 1134 aa26.88■■□□□ 1.89
HOMER3-201ENST00000221222 FIBPO43427 364 aa26.88■■□□□ 1.89
HOMER3-201ENST00000221222 DUSP11O75319 330 aaKnown RBP26.88■■□□□ 1.89
HOMER3-201ENST00000221222 TFRCP02786 760 aaKnown RBP26.88■■□□□ 1.89
HOMER3-201ENST00000221222 SMPD1P17405 629 aa26.88■■□□□ 1.89
HOMER3-201ENST00000221222 UBE2Q1Q7Z7E8 422 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms