RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Serpinb6cW4VSP4 379 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 MypnQ5DTJ9 1315 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Fam171a1A2ATK9 892 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Ccdc170D3YXL0 722 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Atp2a2O55143 1044 aaKnown RBP16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Ezh1P70351 747 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Ccdc127Q3TC33 260 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Lilrb4Q64281 335 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Scfd2Q8BTY8 684 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 N4bp3Q8C7U1 537 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Mrps9Q9D7N3 390 aaKnown RBP16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Ccne2Q9Z238 404 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Olfr310B2RVZ1 332 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Ephb2P54763 986 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Zfp781Q0P5U5 243 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Zfp957Q3UT76 567 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Rab11fip4Q8BQP8 635 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Kcnq5Q9JK45 933 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Krt71Q9R0H5 524 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Nwd2Q6P5U7 1742 aa16.18■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Simc1E9Q6E9 1354 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Ptpn20O55082 426 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Mex3cQ05A36 652 aaKnown RBP16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Gbp9Q8BTS3 619 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Exoc1Q8R3S6 894 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Xpo6Q924Z6 1125 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Fsip1Q9D3V5 435 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Appbp2Q9DAX9 585 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Rab27aQ9ERI2 221 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Myh7Q91Z83 1935 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Slit1Q80TR4 1531 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Fam186bD3Z420 943 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Tada2bD3Z4Z0 420 aaKnown RBP16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Xrcc6P23475 608 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Abi2P62484 446 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Asap2Q7SIG6 958 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Slfnl1Q8BHW9 410 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Eif3bQ8JZQ9 803 aaKnown RBP16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Coq6Q8R1S0 476 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Pkd2l2Q9JLG4 621 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Ubxn8Q9QZ49 277 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Plcb1Q9Z1B3 1216 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Myh8P13542 1937 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Hspa9P38647 679 aaKnown RBP16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Atp8a1P70704 1164 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 NfrkbQ6PIJ4 1296 aaKnown RBP16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Ccser1Q8C0C4 895 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Jph2Q9ET78 696 aa16.17■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Myh10Q61879 1976 aaKnown RBP16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Myh2G3UW82 1942 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Plekhd1B2RPU2 505 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 ProcP33587 460 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Rab21P35282 222 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Eef1dP57776 281 aaKnown RBP16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Klhl29Q80T74 875 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Tmem119Q8R138 280 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Dnajc3Q91YW3 504 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 PawrQ925B0 333 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Pdcd7Q9WTY1 482 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Kif9Q9WV04 790 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Frmd7A2AD83 703 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 R3hdm1E9Q9Q2 1135 aaKnown RBP16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Dctn1O08788 1281 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Guca2bO09051 106 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Shc3Q61120 474 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Anks6Q6GQX6 883 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Prpf38bQ80SY5 542 aaKnown RBP16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Sptlc3Q8BG54 563 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Chmp2bQ8BJF9 213 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Slc9b1Q8C0X2 565 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Gtpbp10Q8K013 366 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Lrrc14Q8VC16 493 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Spats2lQ91WJ7 558 aaKnown RBP16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Cdk9Q99J95 372 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Slc12a4Q9JIS8 1085 aa16.16■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Atp2c2A7L9Z8 944 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 CatspereP0DP43 985 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Parp1P11103 1013 aaKnown RBP16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Shox2P70390 331 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Rgl2Q61193 778 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Celf4Q7TSY6 486 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Naa15Q80UM3 865 aaKnown RBP16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 FsbpQ8BKE5 299 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Q922C1 641 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Znf638Q61464 1960 aaKnown RBP16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Gdpd4Q3TT99 632 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Tmem35bQ3U0Y2 150 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Tas2r124Q7M718 309 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 AmphQ7TQF7 686 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Ubap1Q8BH48 502 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Tmem134Q8R0J4 195 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Ubac1Q8VDI7 409 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 ZgpatQ8VDM1 511 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Dtnbp1Q91WZ8 352 aa16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Noc2lQ9WV70 747 aaKnown RBP16.15■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Pcdhb9E9Q5G2 828 aa16.14■□□□□ 0.17
Ebf3-208ENSMUST00000210774 XlrP05531 208 aa16.14■□□□□ 0.17
Ebf3-208ENSMUST00000210774 Tnni2P13412 182 aa16.14■□□□□ 0.17
Ebf3-208ENSMUST00000210774 Tnnc1P19123 161 aa16.14■□□□□ 0.17
Ebf3-208ENSMUST00000210774 Lrch1P62046 709 aa16.14■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 62.5 ms